Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 9.9e-101 370.2 192 100.0
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.1e-62 243.8 188 68.6
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.3e-60 236.9 181 68.5
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.9e-60 235.7 188 68.1
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 4.1e-54 215.3 193 60.6
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 6.9e-54 214.5 189 64.6
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 2.0e-53 213.0 190 60.0
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 5.9e-53 211.5 189 59.3
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 2.9e-52 209.1 189 59.8
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 3.8e-52 208.8 186 59.7
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 8.5e-52 207.6 187 61.0
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 2.5e-51 206.1 194 59.3
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 3.2e-51 205.7 158 69.0
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 4.2e-51 205.3 193 58.0
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 7.2e-51 204.5 189 59.8
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 1.6e-50 203.4 182 59.9
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 1.6e-50 203.4 192 57.8
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 4.7e-50 201.8 200 55.0
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 6.1e-50 201.4 196 58.7
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 7.9e-50 201.1 187 57.8
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 1.4e-49 200.3 155 68.4
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.8e-49 199.9 176 61.4
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.8e-49 199.9 156 66.7
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 2.3e-49 199.5 149 65.8
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 3.0e-49 199.1 188 61.2
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 3.0e-49 199.1 162 64.2
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.0e-49 199.1 176 60.8
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 3.0e-49 199.1 176 60.8
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 3.9e-49 198.7 188 59.6
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 3.9e-49 198.7 183 56.3
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 5.1e-49 198.4 183 59.6
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 6.7e-49 198.0 186 57.0
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 6.7e-49 198.0 195 55.4
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.5e-48 196.8 188 56.4
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 3.3e-48 195.7 155 65.2
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 3.3e-48 195.7 156 64.1
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 4.4e-48 195.3 178 61.8
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 5.7e-48 194.9 192 57.3
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 5.7e-48 194.9 176 60.8
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.7e-47 193.4 195 54.4
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.7e-47 193.4 178 60.7
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 2.2e-47 193.0 183 57.9
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 2.2e-47 193.0 160 64.4
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 2.8e-47 192.6 158 62.7
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 4.8e-47 191.8 201 53.7
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 6.3e-47 191.4 195 57.4
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 8.2e-47 191.0 165 61.2
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.1e-46 190.7 193 55.4
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 1.1e-46 190.7 182 57.7
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.4e-46 190.3 203 55.7
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 1.8e-46 189.9 178 56.2
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 7.0e-46 188.0 185 57.3
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 1.2e-45 187.2 183 56.3
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.2e-45 187.2 187 57.2
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.2e-45 187.2 197 56.9
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 2.0e-45 186.4 159 61.6
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 2.6e-45 186.0 187 55.1
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.6e-45 186.0 192 56.2
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.6e-45 186.0 160 61.2
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 4.5e-45 185.3 204 52.0
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 4.5e-45 185.3 204 52.0
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 4.5e-45 185.3 171 58.5
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 5.9e-45 184.9 160 61.2
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 5.9e-45 184.9 203 52.2
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 5.9e-45 184.9 198 50.0
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 7.7e-45 184.5 182 56.0
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.0e-44 184.1 162 60.5
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.0e-44 184.1 203 54.2
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.0e-44 184.1 198 53.0
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 1.7e-44 183.3 156 61.5
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.7e-44 183.3 192 55.7
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 2.9e-44 182.6 174 57.5
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 2.9e-44 182.6 198 54.5
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 2.9e-44 182.6 194 54.1
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 5.0e-44 181.8 170 56.5
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 8.5e-44 181.0 165 57.6
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 8.5e-44 181.0 194 54.6
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 8.5e-44 181.0 187 54.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.4e-43 180.3 161 59.0
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 2.5e-43 179.5 187 54.0
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 3.2e-43 179.1 203 52.7
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 4.2e-43 178.7 206 49.5
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 4.2e-43 178.7 189 55.6
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 5.5e-43 178.3 198 52.5
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 1.6e-42 176.8 174 55.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 3.6e-42 175.6 141 63.8
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 4.7e-42 175.3 179 55.3
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.0e-40 169.9 188 49.5
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 3.3e-40 169.1 183 54.1
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 9.7e-40 167.5 153 56.9
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 8.2e-39 164.5 168 51.2
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.4e-38 163.7 205 48.8
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 2.4e-38 162.9 151 54.3
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.1e-38 162.5 149 52.3
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 7.0e-38 161.4 208 45.7
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.2e-37 160.6 194 46.4
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.0e-37 159.8 149 51.7
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 5.9e-37 158.3 170 50.6
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 2.2e-36 156.4 197 44.2
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 1.5e-35 153.7 177 48.6
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 9.7e-32 141.0 142 52.1
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 9.4e-27 124.4 144 43.8
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.8e-25 120.2 92 62.0
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 4.1e-22 109.0 161 44.1
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.0e-21 106.7 127 42.5
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 3.6e-18 95.9 152 35.5
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.0e-16 90.1 141 36.2
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.4e-14 84.0 140 34.3
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 5.4e-14 82.0 148 33.8
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.6e-13 80.5 137 35.0
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 4.5e-13 79.0 141 31.9
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 5.9e-13 78.6 137 35.0
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 7.3e-11 71.6 72 56.9
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 6.1e-10 68.6 85 43.5
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 7.5e-08 61.6 110 43.6
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 2.2e-07 60.1 68 48.5


User provided reference genes

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