Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 0.0e+00 1242.3 709 100.0
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 3.8e-214 748.8 668 66.8
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 6.1e-188 661.8 645 61.6
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 2.5e-165 586.6 385 82.3
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 4.5e-151 539.3 653 51.8
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 1.0e-147 528.1 666 49.8
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 2.0e-143 513.8 694 49.4
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 9.5e-141 505.0 679 48.7
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 2.6e-138 496.9 679 47.6
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 1.4e-136 491.1 440 63.2
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 4.1e-136 489.6 665 51.6
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 4.6e-135 486.1 679 47.0
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 6.0e-135 485.7 656 49.4
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 1.3e-134 484.6 662 48.5
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 2.3e-134 483.8 332 78.3
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 3.9e-134 483.0 483 59.4
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.5e-133 480.3 681 46.7
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 9.5e-133 478.4 675 47.0
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 9.5e-133 478.4 684 46.8
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.1e-131 474.9 662 46.8
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 5.2e-131 472.6 451 61.2
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 3.4e-130 469.9 658 49.8
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 4.4e-130 469.5 341 75.7
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 4.4e-130 469.5 664 46.8
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 5.8e-130 469.2 675 46.2
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 7.5e-130 468.8 672 50.3
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 1.3e-129 468.0 653 46.6
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.7e-129 467.6 652 50.2
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 2.9e-129 466.8 667 47.1
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 4.9e-129 466.1 675 48.7
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 8.3e-129 465.3 672 46.7
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 8.3e-129 465.3 658 47.1
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 1.6e-127 461.1 683 44.9
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 1.6e-127 461.1 707 47.8
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 6.0e-127 459.1 678 46.2
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 2.3e-126 457.2 687 49.1
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 3.6e-124 449.9 678 45.3
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 4.7e-124 449.5 375 65.1
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 4.7e-124 449.5 665 46.9
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 6.2e-124 449.1 445 58.0
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 8.1e-124 448.7 688 45.3
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 3.1e-123 446.8 671 45.2
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 5.2e-123 446.0 652 45.2
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 6.8e-123 445.7 665 46.3
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 1.2e-122 444.9 660 46.2
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 1.5e-122 444.5 676 45.6
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 9.9e-122 441.8 673 45.5
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 9.9e-122 441.8 678 44.2
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 2.9e-121 440.3 663 44.0
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 2.4e-120 437.2 683 46.0
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 4.1e-120 436.4 673 42.8
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 7.1e-120 435.6 650 46.6
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 7.1e-120 435.6 682 43.5
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 6.0e-119 432.6 684 42.8
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 5.1e-118 429.5 649 45.6
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 6.6e-118 429.1 672 44.9
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 1.1e-117 428.3 677 44.0
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 1.9e-117 427.6 676 43.6
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 2.5e-117 427.2 648 45.5
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 5.6e-117 426.0 672 43.6
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 9.6e-117 425.2 617 47.8
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 1.4e-115 421.4 674 44.2
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 2.0e-114 417.5 678 43.2
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 9.9e-114 415.2 676 41.9
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 1.3e-113 414.8 477 53.7
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 8.4e-113 412.1 688 43.2
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 8.4e-113 412.1 721 44.2
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 4.6e-111 406.4 688 43.5
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 6.0e-111 406.0 695 43.2
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 1.0e-110 405.2 682 42.2
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 1.7e-110 404.4 656 43.1
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 5.1e-110 402.9 671 41.4
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 1.5e-109 401.4 629 43.1
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 5.6e-109 399.4 468 52.8
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 5.6e-109 399.4 699 40.3
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 8.1e-108 395.6 380 61.1
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 3.4e-106 390.2 679 41.8
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 4.4e-106 389.8 695 41.7
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 1.7e-105 387.9 637 43.0
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 2.9e-105 387.1 443 52.6
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 2.9e-105 387.1 690 40.9
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 1.1e-104 385.2 678 40.9
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 9.3e-104 382.1 683 41.1
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 3.5e-103 380.2 411 54.7
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 4.6e-103 379.8 684 40.9
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 7.9e-103 379.0 441 52.4
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.7e-102 377.9 453 51.7
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.7e-102 377.9 453 51.7
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 2.3e-102 377.5 369 58.5
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 6.6e-102 375.9 668 41.0
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.9e-101 374.4 470 50.2
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 3.3e-101 373.6 368 58.2
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 4.3e-101 373.2 469 49.7
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 9.6e-101 372.1 683 42.0
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 2.8e-100 370.5 688 39.8
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 1.8e-99 367.9 542 44.8
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 1.5e-98 364.8 652 41.9
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.6e-98 364.0 676 39.8
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 2.1e-95 354.4 666 38.7
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 1.6e-92 344.7 658 40.4
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 2.8e-92 344.0 404 50.7
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 6.9e-91 339.3 669 38.6
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 3.8e-89 333.6 404 50.2
Nitab4.5_0000518g0040 Nicotiana tabacum HOM05D004921 ORTHO05D006008 2.6e-58 231.1 466 39.5
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 2.7e-55 221.1 295 49.5
MBI05_g36740_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 1.8e-54 218.4 214 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis HOM05D004921 ORTHO05D006008 1.1e-51 209.1 379 37.2
A01p00580 Brassica napus HOM05D004921 ORTHO05D006008 1.1e-51 209.1 268 47.8
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 2.7e-50 204.5 465 34.6
Dinv16320 Davidia involucrata HOM05D004921 ORTHO05D006008 5.5e-48 196.8 126 76.2
Pp3c3_27510 Physcomitrium patens HOM05D004921 ORTHO05D006008 2.7e-47 194.5 476 34.0
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 1.0e-46 192.6 457 37.9
SMO174G0199 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 3.4e-45 187.6 438 32.4
CBR_g51480 Chara braunii HOM05D004921 ORTHO05D006008 1.8e-43 181.8 392 32.7
BcaNung05547 Brassica carinata HOM05D004921 ORTHO05D006008 9.1e-43 179.5 222 50.9
Mapoly0001s0396 Marchantia polymorpha HOM05D004921 ORTHO05D006008 2.7e-42 177.9 715 27.3
CAN.G727.1 Capsicum annuum HOM05D004921 ORTHO05D006008 8.5e-41 172.9 110 80.0
Nitab4.5_0000518g0050 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.1e-40 172.6 106 82.1
BraA01t00066Z Brassica rapa HOM05D004921 ORTHO05D006008 1.2e-39 169.1 190 51.6
BolC1t00074H Brassica oleracea HOM05D004921 ORTHO05D006008 8.8e-38 162.9 111 74.8
Cc07_g15670 Coffea canephora HOM05D004921 ORTHO05D006008 3.4e-37 161.0 106 75.5
C01p00710 Brassica napus HOM05D004921 ORTHO05D006008 2.2e-36 158.3 112 74.1
Cpa.g.sc82.58 Carica papaya HOM05D004921 ORTHO05D006008 9.5e-32 142.9 112 68.8
Zm00001eb069160 Zea mays HOM05D004921 ORTHO05D006008 4.7e-31 140.6 284 38.7
Dinv04895 Davidia involucrata HOM05D004921 ORTHO05D006008 1.0e-30 139.4 141 61.7
Dinv40591 Davidia involucrata HOM05D004921 ORTHO05D006008 2.2e-28 131.7 140 60.0
Dinv32118 Davidia involucrata HOM05D004921 ORTHO05D006008 2.9e-28 131.3 141 58.9
Cpa.g.sc82.56 Carica papaya HOM05D004921 ORTHO05D006008 3.2e-27 127.9 89 68.5
BcaNung00891 Brassica carinata HOM05D004921 ORTHO05D006008 5.4e-27 127.1 90 70.0
Nn5g31279 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.1e-24 119.4 87 71.3
SEGI_21175 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 3.3e-24 117.9 110 51.8
SMO197G0017 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 7.3e-24 116.7 210 36.7
CSS0005403 Camellia sinensis var. sinensis HOM05D004921 ORTHO05D006008 1.2e-21 109.4 359 31.5
Cpa.g.sc82.54 Carica papaya HOM05D004921 ORTHO05D006008 3.0e-17 94.7 101 55.4
MCO12G391 Micromonas commoda HOM05D004921 ORTHO05D006008 3.3e-16 91.3 386 25.4
COL.COLO4_35617 Corchorus olitorius HOM05D004921 ORTHO05D006008 3.5e-10 71.2 47 72.3
Actinidia16048 Actinidia chinensis HOM05D004921 ORTHO05D006008 5.1e-09 67.4 45 71.1
Os04g0636600 Oryza sativa ssp. japonica HOM05D004921 ORTHO05D006008 4.3e-08 64.3 384 26.0
Dinv21952 Davidia involucrata HOM05D004921 ORTHO05D006008 1.6e-07 62.4 121 37.2
MBI14_g34262_MAGBIO Magnolia biondii HOM05D000221 ORTHO05D006008 6.8e-06 57.0 45 60.0


User provided reference genes

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