Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.5e-164 582.0 286 100.0
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 5.9e-158 560.8 286 95.8
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 4.7e-131 471.5 284 83.8
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 2.8e-128 462.2 287 78.0
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 6.6e-125 451.1 278 78.1
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 6.6e-125 451.1 278 77.7
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 9.5e-116 420.6 270 75.2
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 4.9e-112 408.3 269 72.5
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 3.5e-110 402.1 272 71.0
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 6.0e-110 401.4 272 71.0
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.7e-109 399.8 272 71.0
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 3.3e-108 395.6 276 69.9
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 2.1e-107 392.9 281 68.3
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 6.2e-107 391.3 272 69.9
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 2.3e-106 389.4 276 69.2
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 1.2e-105 387.1 285 67.4
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 2.6e-105 386.0 273 66.7
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 3.4e-105 385.6 285 67.0
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 7.5e-105 384.4 273 66.7
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 7.5e-105 384.4 273 66.7
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 7.5e-105 384.4 270 67.0
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 1.7e-104 383.3 270 67.4
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 3.7e-104 382.1 276 65.6
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 4.9e-104 381.7 272 69.9
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 8.3e-104 380.9 283 66.8
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.4e-103 380.2 273 65.9
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 1.9e-103 379.8 270 65.9
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 1.9e-103 379.8 276 67.8
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 3.2e-103 379.0 281 63.7
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 4.1e-103 378.6 271 69.0
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 4.1e-103 378.6 271 69.0
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 4.1e-103 378.6 278 65.8
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 5.4e-103 378.3 269 69.9
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 3.5e-102 375.6 271 67.9
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 7.8e-102 374.4 324 61.1
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.7e-101 373.2 271 67.9
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 8.6e-101 370.9 267 67.8
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 1.1e-100 370.5 270 64.8
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 1.5e-100 370.2 294 62.2
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 1.5e-100 370.2 279 64.5
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 2.5e-100 369.4 273 65.6
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 4.3e-100 368.6 280 63.9
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 4.3e-100 368.6 283 63.6
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 7.3e-100 367.9 277 63.9
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 9.5e-100 367.5 280 63.9
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 1.2e-99 367.1 270 66.3
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 1.6e-99 366.7 280 63.6
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.6e-99 366.7 280 65.0
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 2.1e-99 366.3 270 67.4
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 2.1e-99 366.3 294 61.9
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 3.6e-99 365.5 280 63.9
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 3.6e-99 365.5 272 64.3
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 8.1e-99 364.4 278 63.3
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 8.1e-99 364.4 280 62.5
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 1.1e-98 364.0 290 63.8
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 1.8e-98 363.2 275 64.0
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 4.0e-98 362.1 281 62.3
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 5.2e-98 361.7 280 61.8
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 5.2e-98 361.7 280 61.8
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 5.2e-98 361.7 270 67.4
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 6.8e-98 361.3 275 64.0
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 6.8e-98 361.3 287 61.0
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 6.8e-98 361.3 285 62.8
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.2e-97 360.5 279 62.4
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 1.2e-97 360.5 269 65.8
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 2.6e-97 359.4 280 62.9
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 2.6e-97 359.4 271 64.2
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 9.9e-97 357.5 274 63.9
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 1.3e-96 357.1 286 62.2
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 2.2e-96 356.3 279 61.6
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 2.2e-96 356.3 283 61.5
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 4.9e-96 355.1 270 64.8
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 6.4e-96 354.8 287 60.3
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 6.4e-96 354.8 284 59.5
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 2.4e-95 352.8 279 61.3
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 5.4e-95 351.7 281 61.9
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 5.4e-95 351.7 284 59.5
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 1.2e-94 350.5 287 59.6
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 1.3e-93 347.1 272 63.6
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 1.7e-93 346.7 275 62.2
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 3.9e-93 345.5 274 60.6
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 5.1e-93 345.1 311 56.9
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 2.5e-92 342.8 285 60.4
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 7.3e-92 341.3 287 60.3
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 9.6e-92 340.9 317 56.5
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 3.6e-91 339.0 272 62.5
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 8.9e-90 334.3 272 60.3
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.7e-88 330.1 241 64.3
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 2.9e-88 329.3 286 57.3
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 6.4e-88 328.2 276 58.7
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 6.4e-88 328.2 281 56.9
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 1.2e-86 323.9 256 64.5
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 2.1e-86 323.2 271 60.5
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 8.1e-83 311.2 230 63.9
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.6e-78 297.0 279 54.8
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 1.0e-77 294.3 286 54.5
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 8.7e-77 291.2 237 59.5
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 1.9e-76 290.0 239 59.4
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 1.6e-75 287.0 185 74.6
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 3.1e-74 282.7 270 53.7
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 9.9e-73 277.7 271 54.6
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 2.1e-70 270.0 216 60.2
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 2.1e-70 270.0 225 59.6
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 2.5e-68 263.1 272 51.5
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 4.0e-66 255.8 280 49.6
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 2.0e-65 253.4 216 57.4
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 4.2e-63 245.7 263 51.3
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.8e-61 240.4 183 65.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 4.8e-59 232.3 182 65.4
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 2.4e-58 229.9 279 47.7
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 2.6e-57 226.5 203 55.2
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 1.0e-56 224.6 185 60.5
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 3.8e-56 222.6 183 60.7
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 6.5e-56 221.9 188 60.6
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 2.1e-54 216.9 185 58.9
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 2.1e-54 216.9 189 58.2
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 2.5e-52 209.9 275 43.6
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 8.2e-51 204.9 141 64.5
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 1.1e-50 204.5 181 58.6
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.1e-50 204.5 142 68.3
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.3e-48 197.6 142 66.9
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 1.9e-47 193.7 275 40.0
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 4.2e-47 192.6 224 48.2
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 9.4e-47 191.4 272 42.3
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 7.4e-44 181.8 111 78.4
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 1.5e-36 157.5 121 64.5
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 8.5e-32 141.7 128 60.9
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 4.0e-29 132.9 110 51.8
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 1.3e-27 127.9 270 36.3
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 1.3e-27 127.9 125 52.0
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 1.5e-23 114.4 77 76.6
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 1.5e-23 114.4 272 33.1
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 2.2e-16 90.5 56 75.0
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 3.8e-16 89.7 118 41.5
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 1.5e-15 87.8 125 44.0
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 3.2e-15 86.7 194 33.0
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 4.4e-12 76.3 60 63.3
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 1.1e-10 71.6 58 56.9
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 2.0e-09 67.4 47 63.8
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 1.5e-07 61.2 67 46.3
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 1.9e-07 60.8 83 44.6
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 3.3e-07 60.1 67 46.3
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 7.3e-07 58.9 53 49.1
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 9.5e-07 58.5 126 32.5


User provided reference genes

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