Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02277 Erythranthe guttata HOM05D000141 ORTHO05D045304 1.2e-45 186.0 89 100.0
Oeu012260.1 Olea europaea HOM05D000141 ORTHO05D001311 1.5e-19 99.4 77 66.2
MSTRG.2607 Avicennia marina HOM05D000141 ORTHO05D001311 3.1e-17 91.7 76 56.6
SGA_v2.0_scaffold195G40873 Striga asiatica HOM05D000141 ORTHO05D001311 5.5e-14 80.9 77 54.5
PGSC0003DMG400016188 Solanum tuberosum HOM05D000141 ORTHO05D001311 1.5e-11 72.8 77 50.6
Cc07_g13820 Coffea canephora HOM05D000141 ORTHO05D001311 9.8e-11 70.1 79 54.4
Atru.chr3.1212 Acer truncatum HOM05D000141 ORTHO05D001311 4.9e-10 67.8 66 51.5
Dinv36958 Davidia involucrata HOM05D000141 ORTHO05D001311 8.3e-10 67.0 77 46.8
Atru.chr2.3472 Acer truncatum HOM05D000141 ORTHO05D001311 3.1e-09 65.1 56 57.1
Cfa006861 Carpinus fangiana HOM05D000141 ORTHO05D001311 3.1e-09 65.1 77 48.1
Haze_03903 Corylus avellana HOM05D000141 ORTHO05D001311 4.1e-09 64.7 77 48.1
Dinv27017 Davidia involucrata HOM05D000141 ORTHO05D001311 5.4e-09 64.3 76 46.1
Gorai.008G093800 Gossypium raimondii HOM05D000141 ORTHO05D001311 7.0e-09 63.9 78 48.7
Solyc11g010920.3 Solanum lycopersicum HOM05D000141 ORTHO05D001311 7.0e-09 63.9 77 46.8
Gohir.D12G083700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 9.2e-09 63.5 78 48.7
GSVIVG01003949001 Vitis vinifera HOM05D000141 ORTHO05D045304 9.2e-09 63.5 70 50.0
Duzib147G1503 Durio zibethinus HOM05D000141 ORTHO05D001311 1.2e-08 63.2 77 42.9
Ciclev10024772m.g Citrus clementina HOM05D000141 ORTHO05D001311 1.6e-08 62.8 68 51.5
Nitab4.5_0000402g0070 Nicotiana tabacum HOM05D000141 ORTHO05D001311 1.6e-08 62.8 77 41.6
Peaxi162Scf00085g00531 Petunia axillaris HOM05D000141 ORTHO05D001311 2.0e-08 62.4 77 44.2
Rhsim08G0017900 Rhododendron simsii HOM05D000141 ORTHO05D001311 2.0e-08 62.4 73 47.9
Thecc.01G087800 Theobroma cacao HOM05D000141 ORTHO05D001311 2.0e-08 62.4 78 44.9
Sopen11g005660 Solanum pennellii HOM05D000141 ORTHO05D001311 2.7e-08 62.0 77 46.8
vmacro18541 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 5.9e-08 60.8 77 45.5
Gohir.A12G085600 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.0e-07 60.1 78 47.4
CiPaw.07G045600 Carya illinoinensis HOM05D000141 ORTHO05D001311 1.3e-07 59.7 77 41.6
DCAR_003440 Daucus carota HOM05D000141 ORTHO05D001311 5.0e-07 57.8 72 48.6
Duzib187G1520 Durio zibethinus HOM05D000141 ORTHO05D001311 6.6e-07 57.4 80 45.0
TWI53G1166 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 6.6e-07 57.4 70 47.1
Manes.13G102000 Manihot esculenta HOM05D000141 ORTHO05D001311 8.6e-07 57.0 73 45.2
CAN.G1813.5 Capsicum annuum HOM05D000141 ORTHO05D001311 1.1e-06 56.6 72 41.7
TWI74G0124 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 1.1e-06 56.6 57 50.9
COL.COLO4_27381 Corchorus olitorius HOM05D000141 ORTHO05D001311 3.3e-06 55.1 78 42.3
Cpa.g.sc55.5 Carica papaya HOM05D000141 ORTHO05D001311 4.3e-06 54.7 76 43.4
FvH4_1g19311 Fragaria vesca HOM05D000141 ORTHO05D001311 4.3e-06 54.7 55 50.9
FAN19G0828 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.3e-06 54.7 55 50.9
FAN28G1133 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.3e-06 54.7 55 50.9
FAN23G2724 Fragaria x ananassa HOM05D000141 ORTHO05D001311 7.3e-06 53.9 55 50.9
FAN26G0872 Fragaria x ananassa HOM05D000141 ORTHO05D001311 7.3e-06 53.9 55 50.9
RcHm_v2.0_Chr2g0110681 Rosa chinensis HOM05D000141 ORTHO05D001311 7.3e-06 53.9 55 50.9


User provided reference genes

Program Settings