Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 5.3e-64 247.7 138 100.0
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 7.4e-58 227.3 138 93.5
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 2.0e-18 96.3 145 44.1
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 2.0e-18 96.3 137 44.5
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 5.4e-16 88.2 120 44.2
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 1.1e-13 80.5 140 37.1
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.1e-13 80.5 147 36.7
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 1.9e-13 79.7 147 36.7
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 7.3e-13 77.8 121 40.5
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 2.8e-12 75.9 131 37.4
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 3.6e-12 75.5 120 38.3
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 1.8e-11 73.2 135 37.8
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 3.1e-11 72.4 134 41.0
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 3.1e-11 72.4 134 41.0
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.1e-11 72.4 139 36.7
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 6.8e-11 71.2 128 36.7
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 1.2e-10 70.5 120 39.2
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.5e-10 70.1 120 37.5
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.5e-10 70.1 118 37.3
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 3.7e-09 65.5 139 34.5
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 6.4e-09 64.7 129 35.7
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 8.3e-09 64.3 122 34.4
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.1e-08 63.9 137 32.8
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.4e-08 63.5 118 37.3
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.4e-08 62.8 125 35.2
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 2.4e-08 62.8 132 35.6
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 2.4e-08 62.8 119 35.3
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 2.4e-08 62.8 125 36.0
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.2e-08 62.4 133 34.6
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.1e-08 62.0 132 35.6
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 7.1e-08 61.2 131 35.1
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 7.1e-08 61.2 125 35.2
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.2e-07 60.5 118 36.4
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.2e-07 60.5 126 37.3
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 1.2e-07 60.5 131 36.6
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.2e-07 60.5 117 36.8
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.6e-07 60.1 118 35.6
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.6e-07 60.1 118 35.6
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.1e-07 59.7 144 32.6
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.7e-07 59.3 127 36.2
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 3.5e-07 58.9 138 32.6
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 4.6e-07 58.5 128 35.9
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 4.6e-07 58.5 108 35.2
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 1.0e-06 57.4 130 33.1
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.3e-06 57.0 136 33.8
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.7e-06 56.6 127 34.6
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.0e-06 55.8 111 35.1
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 3.9e-06 55.5 131 35.9
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 3.9e-06 55.5 135 31.1
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 5.1e-06 55.1 108 35.2
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 6.6e-06 54.7 117 35.9


User provided reference genes

Program Settings