Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 2.6e-66 255.4 140 100.0
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 7.5e-58 227.3 138 93.5
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 1.8e-19 99.8 147 43.5
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 5.3e-19 98.2 147 42.2
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 2.9e-17 92.4 126 42.9
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 3.0e-14 82.4 131 39.7
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 1.3e-12 77.0 147 35.4
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 1.3e-12 77.0 140 38.6
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.3e-12 77.0 133 38.3
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 8.2e-12 74.3 141 37.6
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.1e-11 73.9 128 37.5
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 1.4e-11 73.6 125 38.4
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 5.3e-11 71.6 129 42.6
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 5.3e-11 71.6 129 42.6
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 5.3e-11 71.6 125 36.0
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.0e-10 69.7 124 37.9
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 7.6e-10 67.8 120 38.3
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.0e-09 67.4 133 37.6
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 2.2e-09 66.2 119 36.1
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.4e-08 63.5 122 33.6
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.9e-08 63.2 123 35.8
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.9e-08 63.2 119 37.8
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.2e-08 62.4 115 36.5
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 4.2e-08 62.0 136 36.0
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 5.5e-08 61.6 131 33.6
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 5.5e-08 61.6 131 33.6
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 5.5e-08 61.6 120 33.3
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 5.5e-08 61.6 110 38.2
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 7.2e-08 61.2 110 40.0
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 7.2e-08 61.2 118 36.4
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 7.2e-08 61.2 119 35.3
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 7.2e-08 61.2 129 34.9
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 1.6e-07 60.1 110 36.4
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.6e-07 60.1 131 35.1
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 2.1e-07 59.7 127 37.0
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.7e-07 59.3 122 34.4
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 3.6e-07 58.9 111 35.1
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.6e-07 58.9 108 35.2
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 4.6e-07 58.5 109 36.7
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 7.9e-07 57.8 119 35.3
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 7.9e-07 57.8 126 37.3
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 7.9e-07 57.8 109 37.6
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.3e-06 57.0 113 36.3
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.8e-06 56.6 127 34.6
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.8e-06 56.6 135 34.8
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.3e-06 56.2 118 34.7
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 3.0e-06 55.8 139 31.7
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 5.1e-06 55.1 128 33.6
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 5.1e-06 55.1 108 35.2
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 5.1e-06 55.1 153 29.4
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 5.1e-06 55.1 129 31.8
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 6.7e-06 54.7 124 33.1


User provided reference genes

Program Settings