Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 2.5e-210 735.3 415 100.0
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 2.7e-143 512.7 426 72.5
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.2e-138 497.3 425 71.1
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 6.6e-134 481.5 422 70.9
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 2.1e-132 476.5 429 68.5
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 3.6e-132 475.7 422 69.0
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 8.9e-131 471.1 416 68.8
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 7.0e-128 461.5 416 67.8
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 1.2e-127 460.7 415 68.0
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 1.6e-127 460.3 416 67.8
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 1.0e-126 457.6 415 68.7
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 1.5e-125 453.8 428 65.4
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 3.4e-122 442.6 415 66.7
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 1.6e-119 433.7 434 64.7
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 3.5e-119 432.6 441 62.4
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 7.8e-119 431.4 414 65.2
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 3.9e-118 429.1 439 62.0
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 5.1e-118 428.7 432 63.0
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 2.5e-117 426.4 448 61.4
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 3.3e-117 426.0 416 64.9
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 4.3e-117 425.6 447 58.6
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 5.2e-115 418.7 416 62.5
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 8.9e-115 417.9 372 70.4
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 8.9e-115 417.9 425 63.5
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 8.9e-115 417.9 409 63.1
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 1.2e-114 417.5 446 62.6
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 2.0e-114 416.8 442 61.3
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 4.4e-114 415.6 438 62.1
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 5.8e-114 415.2 393 66.4
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 7.6e-114 414.8 385 68.6
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 7.6e-114 414.8 382 67.8
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.1e-112 411.0 435 62.5
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 1.4e-112 410.6 429 59.7
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 1.9e-112 410.2 428 61.4
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.4e-112 409.8 382 67.0
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 5.4e-112 408.7 316 78.2
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 7.1e-112 408.3 436 61.5
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 1.6e-111 407.1 312 78.2
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 1.6e-111 407.1 333 75.1
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 3.5e-111 406.0 416 63.0
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 7.8e-111 404.8 327 75.2
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 1.0e-110 404.4 428 61.9
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 1.9e-109 400.2 332 72.6
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 1.9e-109 400.2 462 55.4
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 3.3e-109 399.4 326 74.8
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 6.2e-108 395.2 410 62.7
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 8.1e-108 394.8 354 70.1
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 8.9e-107 391.3 351 68.9
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 1.5e-106 390.6 352 69.6
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 1.5e-106 390.6 429 62.0
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 2.0e-106 390.2 425 60.5
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 2.6e-106 389.8 359 67.1
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 2.6e-106 389.8 392 63.8
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 4.4e-106 389.0 362 66.9
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 5.8e-106 388.7 371 67.7
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 7.6e-106 388.3 423 61.0
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 9.9e-106 387.9 343 71.1
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 9.9e-106 387.9 350 69.4
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 9.9e-106 387.9 433 59.6
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 1.3e-105 387.5 346 70.8
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.3e-105 387.5 425 60.2
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 1.3e-105 387.5 410 61.7
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 1.7e-105 387.1 339 70.8
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 4.9e-105 385.6 433 59.1
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 6.4e-105 385.2 429 58.7
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 2.4e-104 383.3 383 63.7
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 7.1e-104 381.7 318 73.9
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 9.3e-104 381.3 334 71.6
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 9.3e-104 381.3 316 72.8
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.2e-103 380.9 330 71.8
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 2.1e-103 380.2 313 73.5
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 6.0e-103 378.6 425 60.0
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 1.7e-102 377.1 319 73.7
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 1.7e-102 377.1 319 73.7
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 2.3e-102 376.7 313 73.2
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 2.3e-102 376.7 313 73.2
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 3.0e-102 376.3 331 71.6
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 3.9e-102 375.9 360 65.6
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 1.5e-101 374.0 374 62.3
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 3.3e-101 372.9 328 68.3
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 6.2e-100 368.6 340 66.5
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 1.8e-99 367.1 304 73.7
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 1.8e-99 367.1 378 60.6
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 2.4e-99 366.7 304 73.0
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 1.5e-98 364.0 374 61.8
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 2.0e-98 363.6 425 57.9
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 2.0e-98 363.6 338 65.4
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 3.4e-98 362.8 357 65.3
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.3e-97 360.9 416 58.7
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 3.8e-97 359.4 375 62.4
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 3.8e-97 359.4 404 59.2
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 5.4e-96 355.5 319 68.3
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 2.1e-95 353.6 338 65.1
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 4.6e-95 352.4 268 79.1
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 7.9e-95 351.7 253 71.9
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 7.9e-95 351.7 245 75.9
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 1.3e-92 344.4 297 63.3
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 3.2e-88 329.7 323 65.9
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 8.7e-86 321.6 314 63.7
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 4.9e-81 305.8 325 61.8
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 4.2e-80 302.8 372 56.5
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 3.7e-76 289.7 254 73.2
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 4.2e-72 276.2 325 59.4
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 9.7e-69 265.0 189 76.2
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 1.1e-59 235.0 150 79.3
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 5.9e-58 229.2 228 60.1
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 3.9e-54 216.5 303 47.9
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.8e-51 207.6 301 50.5
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.2e-50 204.9 355 45.9
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 3.5e-50 203.4 231 46.3
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 1.0e-49 201.8 257 57.6
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.9e-48 197.6 122 83.6
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 1.2e-47 194.9 257 58.0
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.2e-47 194.9 243 47.3
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 2.5e-40 170.6 253 51.8
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 3.0e-38 163.7 347 38.0
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 5.4e-35 152.9 122 67.2
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 4.2e-32 143.3 203 41.4
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 8.3e-28 129.0 77 85.7
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 2.7e-26 124.0 222 50.0
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 9.2e-19 99.0 136 55.9
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 2.5e-16 90.9 60 75.0
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 2.7e-10 70.9 134 36.6
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 5.0e-09 66.6 101 45.5


User provided reference genes

Program Settings