Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 1.1e-90 336.7 181 100.0
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.0e-43 180.6 170 63.5
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.2e-42 177.2 153 67.3
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 5.4e-40 168.3 137 73.7
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.9e-37 159.8 110 79.1
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.6e-31 140.2 152 54.6
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 1.6e-31 140.2 96 75.0
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 2.3e-30 136.3 133 56.4
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 5.0e-30 135.2 126 60.3
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 5.0e-30 135.2 109 63.3
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 5.0e-30 135.2 108 63.9
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.9e-29 133.3 128 57.8
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 4.3e-29 132.1 119 58.8
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 7.3e-29 131.3 98 67.3
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 7.3e-29 131.3 108 62.0
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 9.5e-29 131.0 139 55.4
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.6e-28 130.2 120 60.8
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 2.8e-28 129.4 110 60.0
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 3.6e-28 129.0 93 69.9
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 4.7e-28 128.6 126 54.8
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.7e-28 128.6 113 70.8
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 2.3e-27 126.3 96 63.5
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 6.8e-27 124.8 111 60.4
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 8.9e-27 124.4 122 56.6
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 1.2e-26 124.0 100 63.0
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.2e-26 124.0 98 63.3
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-26 124.0 116 56.9
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-26 124.0 116 56.9
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.2e-26 124.0 124 55.6
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.5e-26 123.6 140 50.0
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.0e-26 123.2 116 56.9
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.6e-26 122.9 100 61.0
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 2.6e-26 122.9 94 62.8
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 3.4e-26 122.5 127 52.8
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 5.8e-26 121.7 99 63.6
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 7.5e-26 121.3 96 63.5
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.3e-25 120.6 139 51.1
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.3e-25 120.6 140 46.4
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.3e-25 120.6 102 56.9
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.7e-25 120.2 140 46.4
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 1.7e-25 120.2 85 69.4
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 2.2e-25 119.8 142 50.0
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.2e-25 119.8 128 53.1
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 2.2e-25 119.8 138 52.2
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.7e-25 119.0 138 50.0
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 3.7e-25 119.0 139 47.5
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 4.9e-25 118.6 142 49.3
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 4.9e-25 118.6 132 50.0
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.9e-25 118.6 107 56.1
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 6.4e-25 118.2 102 60.8
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 8.3e-25 117.9 127 52.0
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.1e-24 117.5 99 60.6
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 1.1e-24 117.5 151 47.0
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.1e-24 117.5 95 60.0
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.9e-24 116.7 99 58.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.9e-24 116.7 99 60.6
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.9e-24 116.7 120 50.0
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 1.9e-24 116.7 98 59.2
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 2.4e-24 116.3 99 60.6
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 3.2e-24 115.9 96 61.5
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 3.2e-24 115.9 96 57.3
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 4.1e-24 115.5 121 53.7
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 5.4e-24 115.2 122 49.2
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 7.0e-24 114.8 108 52.8
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 7.0e-24 114.8 124 50.8
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 7.0e-24 114.8 136 48.5
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 7.0e-24 114.8 110 54.5
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 9.2e-24 114.4 128 52.3
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 9.2e-24 114.4 141 47.5
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.6e-23 113.6 137 49.6
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.6e-23 113.6 108 50.9
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.6e-23 113.6 108 51.9
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 3.5e-23 112.5 137 49.6
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.5e-23 112.5 82 67.1
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 4.6e-23 112.1 135 47.4
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 7.8e-23 111.3 101 53.5
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 7.8e-23 111.3 141 48.9
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.7e-22 110.2 96 58.3
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 2.3e-22 109.8 137 47.4
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 3.0e-22 109.4 137 47.4
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 3.0e-22 109.4 91 61.5
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 5.1e-22 108.6 96 57.3
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 8.6e-22 107.8 137 46.7
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 8.6e-22 107.8 94 58.5
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.5e-21 107.1 132 48.5
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.5e-21 107.1 150 44.7
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.5e-21 107.1 114 52.6
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 2.5e-21 106.3 96 58.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 5.6e-21 105.1 114 48.2
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 5.6e-21 105.1 80 65.0
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 9.5e-21 104.4 130 48.5
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.1e-20 103.2 86 57.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 4.7e-20 102.1 99 53.5
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.7e-20 102.1 151 45.0
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 6.2e-20 101.7 106 51.9
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.4e-19 100.5 93 54.8
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 4.0e-19 99.0 99 51.5
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 8.9e-19 97.8 96 51.0
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.5e-18 97.1 90 50.0
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 5.8e-18 95.1 107 46.7
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 6.4e-17 91.7 132 40.2
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 6.4e-17 91.7 84 52.4
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.9e-16 90.1 106 50.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 4.1e-16 89.0 74 59.5
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.2e-15 87.4 112 42.9
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 2.1e-15 86.7 94 51.1
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.7e-15 86.3 156 34.6
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 3.5e-15 85.9 79 57.0
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 1.1e-13 80.9 56 67.9
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.5e-13 80.5 90 45.6
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.5e-13 80.5 129 38.0
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 4.3e-13 79.0 89 43.8


User provided reference genes

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