Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02137 Erythranthe guttata HOM05D001501 ORTHO05D001329 7.4e-92 340.5 170 100.0
Oeu030085.1 Olea europaea HOM05D001501 ORTHO05D001329 4.5e-12 75.5 249 30.9
SalBow7G4494 Salvia bowleyana HOM05D001501 ORTHO05D001329 9.9e-12 74.3 246 31.3
Migut.M00245 Erythranthe guttata HOM05D001501 ORTHO05D001329 2.2e-11 73.2 138 37.7
MSTRG.15083 Avicennia marina HOM05D001501 ORTHO05D001329 6.4e-11 71.6 114 41.2
CiPaw.09G072400 Carya illinoinensis HOM05D001501 ORTHO05D001329 8.4e-11 71.2 236 30.5
Thecc.02G212700 Theobroma cacao HOM05D001501 ORTHO05D001329 8.4e-11 71.2 121 38.8
Nn3g21114 Nelumbo nucifera HOM05D001501 ORTHO05D001329 1.4e-10 70.5 232 30.6
TWI09G0923 Tripterygium wilfordii HOM05D001501 ORTHO05D001329 1.4e-10 70.5 241 29.9
TAR627G0009 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.2e-10 69.3 227 30.0
TAR627G0776 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.2e-10 69.3 227 30.0
VMungo0251G2897 Vigna mungo HOM05D001501 ORTHO05D001329 3.2e-10 69.3 246 28.0
Medtr2g083910 Medicago truncatula HOM05D001501 ORTHO05D001329 4.2e-10 68.9 139 37.4
Atru.chr6.2761 Acer truncatum HOM05D001501 ORTHO05D001329 1.6e-09 67.0 104 37.5
Sabra04G0038700 Salix brachista HOM05D001501 ORTHO05D001329 1.6e-09 67.0 104 41.3
AUR62027712 Chenopodium quinoa HOM05D001501 ORTHO05D001329 2.1e-09 66.6 91 42.9
TPR.G6741 Trifolium pratense HOM05D001501 ORTHO05D001329 2.1e-09 66.6 242 28.5
Psat7g069240 Pisum sativum HOM05D001501 ORTHO05D001329 2.7e-09 66.2 129 36.4
Atru.chr10.1581 Acer truncatum HOM05D001501 ORTHO05D001329 3.5e-09 65.9 116 37.1
Dinv12368 Davidia involucrata HOM05D001501 ORTHO05D001329 3.5e-09 65.9 235 26.8
VMungo1127G0359 Vigna mungo HOM05D001501 ORTHO05D001329 3.5e-09 65.9 240 31.7
Phvul.002G240700 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 4.6e-09 65.5 106 39.6
TPR.G20003 Trifolium pratense HOM05D001501 ORTHO05D001329 4.6e-09 65.5 140 34.3
Eucgr.L00732 Eucalyptus grandis HOM05D001501 ORTHO05D001329 6.0e-09 65.1 174 29.3
Haze_13430 Corylus avellana HOM05D001501 ORTHO05D001329 7.9e-09 64.7 102 41.2
Dinv12367 Davidia involucrata HOM05D001501 ORTHO05D001329 7.9e-09 64.7 238 26.1
Lalb_Chr12g0205011 Lupinus albus HOM05D001501 ORTHO05D001329 7.9e-09 64.7 236 28.8
Nn1g04509 Nelumbo nucifera HOM05D001501 ORTHO05D001329 7.9e-09 64.7 104 39.4
Phvul.011G127600 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 7.9e-09 64.7 238 30.3
GSVIVG01020749001 Vitis vinifera HOM05D001501 ORTHO05D001329 7.9e-09 64.7 104 39.4
Duzib235G1519 Durio zibethinus HOM05D001501 ORTHO05D001329 1.0e-08 64.3 108 39.8
Glyma.12G129900 Glycine max HOM05D001501 ORTHO05D001329 1.0e-08 64.3 106 38.7
Manes.16G042221 Manihot esculenta HOM05D001501 ORTHO05D001329 1.0e-08 64.3 238 27.3
Thecc.06G166500 Theobroma cacao HOM05D001501 ORTHO05D001329 1.0e-08 64.3 123 38.2
Ca_17901_v3 Cicer arietinum L. HOM05D001501 ORTHO05D001329 1.3e-08 63.9 107 39.3
CDE02G3304 Ceratophyllum demersum HOM05D001501 ORTHO05D001329 1.8e-08 63.5 224 26.8
Dinv12365 Davidia involucrata HOM05D001501 ORTHO05D001329 1.8e-08 63.5 224 30.4
Migut.M01012 Erythranthe guttata HOM05D001501 ORTHO05D001329 1.8e-08 63.5 107 38.3
Glyma.06G275500 Glycine max HOM05D001501 ORTHO05D001329 1.8e-08 63.5 108 38.0
Manes.17G058500 Manihot esculenta HOM05D001501 ORTHO05D001329 1.8e-08 63.5 241 29.0
Psat5g250680 Pisum sativum HOM05D001501 ORTHO05D001329 1.8e-08 63.5 209 28.2
RcHm_v2.0_Chr5g0011511 Rosa chinensis HOM05D001501 ORTHO05D001329 1.8e-08 63.5 243 27.2
CiPaw.10G061300 Carya illinoinensis HOM05D001501 ORTHO05D001329 2.3e-08 63.2 104 39.4
Lj6g0010216 Lotus japonicus HOM05D001501 ORTHO05D001329 2.3e-08 63.2 129 38.0
Potri.011G069900 Populus trichocarpa HOM05D001501 ORTHO05D001329 2.3e-08 63.2 232 29.3
Sopen12g006300 Solanum pennellii HOM05D001501 ORTHO05D001329 2.3e-08 63.2 223 28.7
EL10Ac8g20569 Beta vulgaris HOM05D001501 ORTHO05D001329 3.0e-08 62.8 241 28.2
ClCG07G002630 Citrullus lanatus HOM05D001501 ORTHO05D001329 3.0e-08 62.8 108 37.0
Potri.004G059900 Populus trichocarpa HOM05D001501 ORTHO05D001329 3.0e-08 62.8 232 26.7
Duzib192G0322 Durio zibethinus HOM05D001501 ORTHO05D001329 3.9e-08 62.4 108 38.0
Glyma.15G085500 Glycine max HOM05D001501 ORTHO05D001329 3.9e-08 62.4 104 40.4
Peaxi162Scf00371g00510 Petunia axillaris HOM05D001501 ORTHO05D001329 3.9e-08 62.4 205 26.3
Sabra11G0054000 Salix brachista HOM05D001501 ORTHO05D001329 3.9e-08 62.4 105 39.0
Sabra11G0057500 Salix brachista HOM05D001501 ORTHO05D001329 3.9e-08 62.4 105 39.0
TWI23G0154 Tripterygium wilfordii HOM05D001501 ORTHO05D001329 3.9e-08 62.4 239 26.8
Ca_00464_v3 Cicer arietinum L. HOM05D001501 ORTHO05D001329 5.1e-08 62.0 105 37.1
Cc02_g15500 Coffea canephora HOM05D001501 ORTHO05D001329 5.1e-08 62.0 110 38.2
FvH4_5g20610 Fragaria vesca HOM05D001501 ORTHO05D001329 5.1e-08 62.0 239 26.8
Glyma.05G160500 Glycine max HOM05D001501 ORTHO05D001329 5.1e-08 62.0 237 27.8
Glyma.08G118000 Glycine max HOM05D001501 ORTHO05D001329 5.1e-08 62.0 247 27.9
Glyma.13G226900 Glycine max HOM05D001501 ORTHO05D001329 5.1e-08 62.0 105 40.0
Glyma.12G212200 Glycine max HOM05D001501 ORTHO05D001329 6.7e-08 61.6 107 37.4
Lj3g0016424 Lotus japonicus HOM05D001501 ORTHO05D001329 6.7e-08 61.6 253 28.9
Lj4g0005149 Lotus japonicus HOM05D001501 ORTHO05D001329 6.7e-08 61.6 110 37.3
LjContig00201_ERROPOS200000g0023299 Lotus japonicus HOM05D001501 ORTHO05D001329 6.7e-08 61.6 254 29.5
Medtr8g086820 Medicago truncatula HOM05D001501 ORTHO05D001329 6.7e-08 61.6 243 27.2
Phvul.005G093900 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 6.7e-08 61.6 107 37.4
VMungo1080G0601 Vigna mungo HOM05D001501 ORTHO05D001329 6.7e-08 61.6 107 37.4
Lalb_Chr07g0186361 Lupinus albus HOM05D001501 ORTHO05D001329 8.7e-08 61.2 232 25.9
Manes.16G042211 Manihot esculenta HOM05D001501 ORTHO05D001329 8.7e-08 61.2 206 30.1
Oeu042465.1 Olea europaea HOM05D001501 ORTHO05D001329 8.7e-08 61.2 233 27.5
Psat7g069280 Pisum sativum HOM05D001501 ORTHO05D001329 8.7e-08 61.2 106 37.7
PGSC0003DMG400007804 Solanum tuberosum HOM05D001501 ORTHO05D001329 8.7e-08 61.2 223 27.4
Cfa000644 Carpinus fangiana HOM05D001501 ORTHO05D001329 1.1e-07 60.8 105 37.1
Ciclev10016436m.g Citrus clementina HOM05D001501 ORTHO05D001329 1.1e-07 60.8 148 32.4
Psat7g164400 Pisum sativum HOM05D001501 ORTHO05D001329 1.1e-07 60.8 235 27.7
Solyc12g010940.1 Solanum lycopersicum HOM05D001501 ORTHO05D001329 1.1e-07 60.8 220 26.8
MELO3C007202.2 Cucumis melo HOM05D001501 ORTHO05D001329 1.5e-07 60.5 224 27.7
Eucgr.K01150 Eucalyptus grandis HOM05D001501 ORTHO05D001329 1.5e-07 60.5 114 36.0
Medtr4g080340 Medicago truncatula HOM05D001501 ORTHO05D001329 1.5e-07 60.5 242 26.9
Peaxi162Scf00469g00065 Petunia axillaris HOM05D001501 ORTHO05D001329 1.5e-07 60.5 106 38.7
RcHm_v2.0_Chr2g0130861 Rosa chinensis HOM05D001501 ORTHO05D001329 1.5e-07 60.5 262 24.0
SalBow8G3563 Salvia bowleyana HOM05D001501 ORTHO05D001329 1.5e-07 60.5 224 27.7
VMungo0540G0954 Vigna mungo HOM05D001501 ORTHO05D001329 1.5e-07 60.5 236 30.1
Haze_06184 Corylus avellana HOM05D001501 ORTHO05D001329 1.9e-07 60.1 105 37.1
Gohir.D05G156600 Gossypium hirsutum HOM05D001501 ORTHO05D001329 1.9e-07 60.1 112 35.7
Gorai.009G161100 Gossypium raimondii HOM05D001501 ORTHO05D001329 1.9e-07 60.1 112 35.7
Gorai.010G160700 Gossypium raimondii HOM05D001501 ORTHO05D001329 1.9e-07 60.1 235 28.1
Peaxi162Scf00384g00013 Petunia axillaris HOM05D001501 ORTHO05D001329 1.9e-07 60.1 225 27.1
Cpa.g.sc52.155 Carica papaya HOM05D001501 ORTHO05D001329 2.5e-07 59.7 244 25.4
Cfa023580 Carpinus fangiana HOM05D001501 ORTHO05D001329 2.5e-07 59.7 95 40.0
Ca_03840_v3 Cicer arietinum L. HOM05D001501 ORTHO05D001329 2.5e-07 59.7 106 35.8
COL.COLO4_31249 Corchorus olitorius HOM05D001501 ORTHO05D001329 2.5e-07 59.7 115 35.7
Gohir.A05G153800 Gossypium hirsutum HOM05D001501 ORTHO05D001329 2.5e-07 59.7 113 35.4
Gohir.A06G132700 Gossypium hirsutum HOM05D001501 ORTHO05D001329 2.5e-07 59.7 235 28.1
MBI06_g36539_MAGBIO Magnolia biondii HOM05D001501 ORTHO05D001329 2.5e-07 59.7 104 38.5
Psat1g195160 Pisum sativum HOM05D001501 ORTHO05D001329 2.5e-07 59.7 118 36.4
TWI59G0319 Tripterygium wilfordii HOM05D001501 ORTHO05D001329 2.5e-07 59.7 240 26.2
Hma1.2p1_0178F.1_g078510 Hydrangea macrophylla HOM05D001501 ORTHO05D001329 3.3e-07 59.3 256 25.4
Lalb_Chr18g0054731 Lupinus albus HOM05D001501 ORTHO05D001329 3.3e-07 59.3 124 35.5
Sed0016466 Sechium edule HOM05D001501 ORTHO05D001329 3.3e-07 59.3 222 28.4
CANSAT64G2132 Cannabis sativa HOM05D001501 ORTHO05D001329 4.3e-07 58.9 123 33.3
CsaV3_7G005740 Cucumis sativus L. HOM05D001501 ORTHO05D001329 4.3e-07 58.9 220 27.7
DCAR_013279 Daucus carota HOM05D001501 ORTHO05D001329 4.3e-07 58.9 246 26.8
FAN18G4527 Fragaria x ananassa HOM05D001501 ORTHO05D001329 4.3e-07 58.9 239 26.4
FAN23G1816 Fragaria x ananassa HOM05D001501 ORTHO05D001329 4.3e-07 58.9 266 23.7
Gohir.D06G138300 Gossypium hirsutum HOM05D001501 ORTHO05D001329 4.3e-07 58.9 238 27.7
Solyc02g072220.1 Solanum lycopersicum HOM05D001501 ORTHO05D001329 4.3e-07 58.9 109 34.9
THA.LOC104802264 Tarenaya hassleriana HOM05D001501 ORTHO05D001329 4.3e-07 58.9 116 31.0
Cc05_g08570 Coffea canephora HOM05D001501 ORTHO05D001329 5.6e-07 58.5 114 36.8
DCAR_016893 Daucus carota HOM05D001501 ORTHO05D001329 5.6e-07 58.5 107 38.3
FAN21G0086 Fragaria x ananassa HOM05D001501 ORTHO05D001329 5.6e-07 58.5 109 33.0
Nitab4.5_0008526g0010 Nicotiana tabacum HOM05D001501 ORTHO05D001329 5.6e-07 58.5 110 37.3
Peaxi162Scf00371g00061 Petunia axillaris HOM05D001501 ORTHO05D001329 5.6e-07 58.5 225 27.6
PGR142G3954 Punica granatum HOM05D001501 ORTHO05D001329 5.6e-07 58.5 261 25.7
Actinidia39519 Actinidia chinensis HOM05D001501 ORTHO05D001329 7.4e-07 58.2 107 35.5
CsaV3_2G008290 Cucumis sativus L. HOM05D001501 ORTHO05D001329 7.4e-07 58.2 217 26.7
FvH4_3g07380 Fragaria vesca HOM05D001501 ORTHO05D001329 7.4e-07 58.2 242 25.6
Hma1.2p1_0067F.1_g037035 Hydrangea macrophylla HOM05D001501 ORTHO05D001329 7.4e-07 58.2 231 27.3
Hma1.2p1_0067F.1_g037050 Hydrangea macrophylla HOM05D001501 ORTHO05D001329 7.4e-07 58.2 231 27.3
Nitab4.5_0000437g0150 Nicotiana tabacum HOM05D001501 ORTHO05D001329 7.4e-07 58.2 113 34.5
MELO3C004039.2 Cucumis melo HOM05D001501 ORTHO05D001329 9.6e-07 57.8 219 27.9
Nitab4.5_0000249g0080 Nicotiana tabacum HOM05D001501 ORTHO05D001329 9.6e-07 57.8 109 38.5
Sed0019237 Sechium edule HOM05D001501 ORTHO05D001329 9.6e-07 57.8 111 35.1
arahy.Tifrunner.gnm1.ann1.T9ZPF9 Arachis hypogaea HOM05D001501 ORTHO05D001329 1.3e-06 57.4 125 33.6
DCAR_005132 Daucus carota HOM05D001501 ORTHO05D001329 1.3e-06 57.4 101 36.6
Lsat_1_v5_gn_1_108561 Lactuca sativa HOM05D001501 ORTHO05D001329 1.3e-06 57.4 104 35.6
Medtr2g016760 Medicago truncatula HOM05D001501 ORTHO05D001329 1.3e-06 57.4 104 37.5
Sopen02g021190 Solanum pennellii HOM05D001501 ORTHO05D001329 1.3e-06 57.4 109 34.9
SGA_v2.0_scaffold1G00073 Striga asiatica HOM05D001501 ORTHO05D001329 1.3e-06 57.4 222 29.3
Ciclev10016386m.g Citrus clementina HOM05D001501 ORTHO05D001329 1.6e-06 57.0 119 32.8
FAN11G2682 Fragaria x ananassa HOM05D001501 ORTHO05D001329 1.6e-06 57.0 242 25.6
Lalb_Chr19g0134831 Lupinus albus HOM05D001501 ORTHO05D001329 1.6e-06 57.0 247 27.1
QL05p048958 Quercus lobata HOM05D001501 ORTHO05D001329 1.6e-06 57.0 241 29.0
Sed0011132 Sechium edule HOM05D001501 ORTHO05D001329 1.6e-06 57.0 213 29.6
Sed0026341 Sechium edule HOM05D001501 ORTHO05D001329 1.6e-06 57.0 104 36.5
Eucgr.E02780 Eucalyptus grandis HOM05D001501 ORTHO05D001329 2.1e-06 56.6 245 24.9
Prupe.4G066000 Prunus persica HOM05D001501 ORTHO05D001329 2.1e-06 56.6 228 26.8
PGSC0003DMG400020412 Solanum tuberosum HOM05D001501 ORTHO05D001329 2.1e-06 56.6 111 36.9
arahy.Tifrunner.gnm1.ann1.KWW7Y5 Arachis hypogaea HOM05D001501 ORTHO05D001329 2.8e-06 56.2 124 33.1
arahy.Tifrunner.gnm1.ann1.U54Z4W Arachis hypogaea HOM05D001501 ORTHO05D001329 2.8e-06 56.2 113 34.5
A04p32370 Brassica napus HOM05D001501 ORTHO05D001329 2.8e-06 56.2 110 32.7
BraA04t18690Z Brassica rapa HOM05D001501 ORTHO05D001329 2.8e-06 56.2 110 32.7
MELO3C018718.2 Cucumis melo HOM05D001501 ORTHO05D001329 2.8e-06 56.2 218 27.5
FAN25G1072 Fragaria x ananassa HOM05D001501 ORTHO05D001329 2.8e-06 56.2 233 24.5
Lalb_Chr15g0086311 Lupinus albus HOM05D001501 ORTHO05D001329 2.8e-06 56.2 233 26.2
MD05G1296400 Malus domestica HOM05D001501 ORTHO05D001329 2.8e-06 56.2 237 27.0
ATR0012G043 Amborella trichopoda HOM05D001501 ORTHO05D001329 3.7e-06 55.8 104 35.6
ClCG03G007480 Citrullus lanatus HOM05D001501 ORTHO05D001329 3.7e-06 55.8 239 27.6
CsaV3_1G033120 Cucumis sativus L. HOM05D001501 ORTHO05D001329 3.7e-06 55.8 256 27.0
FvH4_6g27710 Fragaria vesca HOM05D001501 ORTHO05D001329 3.7e-06 55.8 267 23.6
FAN14G1481 Fragaria x ananassa HOM05D001501 ORTHO05D001329 3.7e-06 55.8 267 23.6
FAN16G3070 Fragaria x ananassa HOM05D001501 ORTHO05D001329 3.7e-06 55.8 237 24.1
Nitab4.5_0000437g0160 Nicotiana tabacum HOM05D001501 ORTHO05D001329 3.7e-06 55.8 225 29.3
MSTRG.7425 Avicennia marina HOM05D001501 ORTHO05D001329 4.8e-06 55.5 113 34.5
CAN.G411.56 Capsicum annuum HOM05D001501 ORTHO05D001329 4.8e-06 55.5 229 26.2
CAN.G411.57 Capsicum annuum HOM05D001501 ORTHO05D001329 4.8e-06 55.5 226 27.9
HanXRQChr17g0559261 Helianthus annuus HOM05D001501 ORTHO05D001329 4.8e-06 55.5 98 38.8
QL08p042327 Quercus lobata HOM05D001501 ORTHO05D001329 4.8e-06 55.5 108 33.3
arahy.Tifrunner.gnm1.ann1.U3Z7UA Arachis hypogaea HOM05D001501 ORTHO05D001329 6.2e-06 55.1 119 32.8
AUR62039466 Chenopodium quinoa HOM05D001501 ORTHO05D001329 6.2e-06 55.1 121 32.2
Eucgr.L01560 Eucalyptus grandis HOM05D001501 ORTHO05D001329 6.2e-06 55.1 249 25.3
Glyma.13G289500 Glycine max HOM05D001501 ORTHO05D001329 6.2e-06 55.1 106 35.8
Nitab4.5_0000990g0030 Nicotiana tabacum HOM05D001501 ORTHO05D001329 6.2e-06 55.1 107 35.5
Nitab4.5_0009428g0010 Nicotiana tabacum HOM05D001501 ORTHO05D001329 6.2e-06 55.1 113 33.6
TAR626G1129 Trochodendron aralioides HOM05D001501 ORTHO05D001329 6.2e-06 55.1 230 27.8
C04p69880 Brassica napus HOM05D001501 ORTHO05D001329 8.1e-06 54.7 114 31.6
CDE10G1333 Ceratophyllum demersum HOM05D000487 ORTHO05D000405 8.1e-06 54.7 104 37.5
Eucgr.E02779 Eucalyptus grandis HOM05D001501 ORTHO05D001329 8.1e-06 54.7 249 25.3
MD10G1276400 Malus domestica HOM05D001501 ORTHO05D001329 8.1e-06 54.7 237 25.3
QL05p049012 Quercus lobata HOM05D001501 ORTHO05D001329 8.1e-06 54.7 241 28.6
Solyc07g055270.1 Solanum lycopersicum HOM05D001501 ORTHO05D001329 8.1e-06 54.7 111 35.1
Sopen07g026950 Solanum pennellii HOM05D001501 ORTHO05D001329 8.1e-06 54.7 111 35.1
PGSC0003DMG400028424 Solanum tuberosum HOM05D001501 ORTHO05D001329 8.1e-06 54.7 231 27.3
HPP92_004005 Vanilla planifolia HOM05D001501 ORTHO05D001329 8.1e-06 54.7 120 32.5


User provided reference genes

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