Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02119 Erythranthe guttata HOM05D007466 ORTHO05D002463 7.5e-60 233.8 130 100.0
Migut.O00006 Erythranthe guttata HOM05D007466 ORTHO05D002463 4.5e-57 224.6 130 94.6
Migut.H01222 Erythranthe guttata HOM05D007466 ORTHO05D002463 4.5e-49 198.0 124 87.9
Oeu048075.1 Olea europaea HOM05D007466 ORTHO05D002463 4.1e-26 121.7 112 58.9
Dinv18525 Davidia involucrata HOM05D007466 ORTHO05D002463 6.6e-24 114.4 119 52.9
CSS0032012 Camellia sinensis var. sinensis HOM05D007466 ORTHO05D002463 1.1e-23 113.6 120 50.0
Nn1g07029 Nelumbo nucifera HOM05D007466 ORTHO05D002463 1.9e-23 112.8 119 48.7
SGA_v2.0_scaffold49G18335 Striga asiatica HOM05D003065 ORTHO05D003802 2.5e-23 112.5 125 52.0
Prupe.3G131400 Prunus persica HOM05D007466 ORTHO05D002463 4.3e-23 111.7 112 47.3
MD17G1239100 Malus domestica HOM05D007466 ORTHO05D002463 1.6e-22 109.8 112 48.2
Manes.13G072400 Manihot esculenta HOM05D007466 ORTHO05D002463 2.8e-22 109.0 111 53.2
Sc06g0006090 Simmondsia chinensis HOM05D007466 ORTHO05D002463 6.2e-22 107.8 112 48.2
DCAR_021185 Daucus carota HOM05D007466 ORTHO05D002463 8.1e-22 107.5 128 46.9
COL.COLO4_27678 Corchorus olitorius HOM05D007466 ORTHO05D002463 1.4e-21 106.7 124 49.2
HanXRQChr14g0459021 Helianthus annuus HOM05D007466 ORTHO05D002463 1.8e-21 106.3 124 47.6
Lalb_Chr22g0349591 Lupinus albus HOM05D007466 ORTHO05D002463 4.0e-21 105.1 114 55.3
MD09G1246300 Malus domestica HOM05D007466 ORTHO05D002463 4.0e-21 105.1 113 48.7
Manes.13G072500 Manihot esculenta HOM05D007466 ORTHO05D002463 4.0e-21 105.1 111 51.4
Solyc07g052500.1 Solanum lycopersicum HOM05D007466 ORTHO05D002463 5.2e-21 104.8 125 44.8
TPR.G4193 Trifolium pratense HOM05D007466 ORTHO05D002463 5.2e-21 104.8 111 49.5
Lsat_1_v5_gn_5_103881 Lactuca sativa HOM05D007466 ORTHO05D002463 6.8e-21 104.4 124 46.0
arahy.Tifrunner.gnm1.ann1.N3UINY Arachis hypogaea HOM05D007466 ORTHO05D002463 8.9e-21 104.0 111 51.4
TWI36G1433 Tripterygium wilfordii HOM05D007466 ORTHO05D002463 8.9e-21 104.0 112 50.0
Medtr2g088760 Medicago truncatula HOM05D007466 ORTHO05D002463 1.2e-20 103.6 111 51.4
Nitab4.5_0005894g0010 Nicotiana tabacum HOM05D007466 ORTHO05D002463 1.2e-20 103.6 124 50.8
GSVIVG01030614001 Vitis vinifera HOM05D007466 ORTHO05D002463 1.2e-20 103.6 119 45.4
Duzib251G0094 Durio zibethinus HOM05D007466 ORTHO05D002463 2.6e-20 102.4 112 48.2
Ca_01590_v3 Cicer arietinum L. HOM05D007466 ORTHO05D002463 3.4e-20 102.1 111 47.7
PGR042G2713 Punica granatum HOM05D007466 ORTHO05D002463 3.4e-20 102.1 112 47.3
CAN.G921.12 Capsicum annuum HOM05D007466 ORTHO05D002463 4.4e-20 101.7 125 44.8
Cc00_g30040 Coffea canephora HOM05D007466 ORTHO05D002463 4.4e-20 101.7 124 46.8
VMungo1080G0180 Vigna mungo HOM05D007466 ORTHO05D002463 7.6e-20 100.9 111 46.8
Phvul.005G113900 Phaseolus vulgaris HOM05D007466 ORTHO05D002463 1.3e-19 100.1 111 47.7
Potri.017G037600 Populus trichocarpa HOM05D007466 ORTHO05D002463 1.3e-19 100.1 119 43.7
QL08p033690 Quercus lobata HOM05D007466 ORTHO05D002463 1.3e-19 100.1 119 46.2
Sed0014854 Sechium edule HOM05D007466 ORTHO05D002463 2.2e-19 99.4 124 45.2
EL10Ac2g04092 Beta vulgaris HOM05D007466 ORTHO05D002463 2.9e-19 99.0 129 42.6
Cfa014433 Carpinus fangiana HOM05D007466 ORTHO05D002463 2.9e-19 99.0 119 43.7
Sabra17G0024500 Salix brachista HOM05D007466 ORTHO05D002463 2.9e-19 99.0 119 44.5
Ciclev10017724m.g Citrus clementina HOM05D007466 ORTHO05D002463 3.8e-19 98.6 124 45.2
Eucgr.A01722 Eucalyptus grandis HOM05D007466 ORTHO05D002463 4.9e-19 98.2 124 41.9
Psat2g121080 Pisum sativum HOM05D007466 ORTHO05D002463 4.9e-19 98.2 111 48.6
Haze_12891 Corylus avellana HOM05D007466 ORTHO05D002463 6.4e-19 97.8 112 44.6
FvH4_6g26390 Fragaria vesca HOM05D007466 ORTHO05D002463 6.4e-19 97.8 111 45.0
Atru.chr6.3156 Acer truncatum HOM05D007466 ORTHO05D002463 2.4e-18 95.9 112 47.3
Gohir.A12G156100 Gossypium hirsutum HOM05D007466 ORTHO05D002463 3.2e-18 95.5 124 44.4
Gorai.008G172300 Gossypium raimondii HOM05D007466 ORTHO05D002463 3.2e-18 95.5 124 44.4
Psat5g265200 Pisum sativum HOM05D007466 ORTHO05D002463 3.2e-18 95.5 110 46.4
Gohir.D12G159200 Gossypium hirsutum HOM05D007466 ORTHO05D002463 4.2e-18 95.1 124 44.4
Thecc.02G312400 Theobroma cacao HOM05D007466 ORTHO05D002463 4.2e-18 95.1 111 46.8
FAN09G4112 Fragaria x ananassa HOM05D007466 ORTHO05D002463 5.4e-18 94.7 124 41.9
unitig_578.g16773 Utricularia gibba HOM05D007466 ORTHO05D002463 5.4e-18 94.7 128 41.4
CSS0024645 Camellia sinensis var. sinensis HOM05D007466 ORTHO05D002463 7.1e-18 94.4 108 46.3
CiPaw.04G117300 Carya illinoinensis HOM05D007466 ORTHO05D002463 7.1e-18 94.4 112 44.6
FAN05G5573 Fragaria x ananassa HOM05D007466 ORTHO05D002463 7.1e-18 94.4 124 41.9
Rhsim06G0158700 Rhododendron simsii HOM05D007466 ORTHO05D002463 7.1e-18 94.4 125 44.8
FAN14G1602 Fragaria x ananassa HOM05D007466 ORTHO05D002463 1.2e-17 93.6 124 41.1
RcHm_v2.0_Chr2g0159951 Rosa chinensis HOM05D007466 ORTHO05D002463 1.2e-17 93.6 124 42.7
RcHm_v2.0_Chr2g0126881 Rosa chinensis HOM05D007466 ORTHO05D002463 1.6e-17 93.2 105 45.7
FvH4_6g43480 Fragaria vesca HOM05D007466 ORTHO05D002463 3.5e-17 92.0 124 40.3
Aqoxy4G01992 Aquilegia oxysepala HOM05D007466 ORTHO05D002463 6.0e-17 91.3 120 40.0
FAN02G3170 Fragaria x ananassa HOM05D007466 ORTHO05D002463 7.8e-17 90.9 108 43.5
FAN05G5633 Fragaria x ananassa HOM05D007466 ORTHO05D002463 7.8e-17 90.9 111 42.3
THA.LOC104801548 Tarenaya hassleriana HOM05D007466 ORTHO05D002463 1.7e-16 89.7 111 41.4
FAN02G1346 Fragaria x ananassa HOM05D007466 ORTHO05D002463 2.3e-16 89.4 123 40.7
ClCG02G001800 Citrullus lanatus HOM05D007466 ORTHO05D002463 6.6e-16 87.8 123 41.5
SHI54719 Sapria himalayana HOM05D007466 ORTHO05D002463 1.5e-15 86.7 112 41.1
A05p13150 Brassica napus HOM05D007466 ORTHO05D002463 1.9e-15 86.3 122 39.3
C04p17280 Brassica napus HOM05D007466 ORTHO05D002463 5.6e-15 84.7 122 38.5
BraA05t20253Z Brassica rapa HOM05D007466 ORTHO05D002463 1.6e-14 83.2 110 40.9
Carub.0004s1370 Capsella rubella HOM05D007466 ORTHO05D002463 1.6e-14 83.2 121 38.8
CARHR126170 Cardamine hirsuta HOM05D007466 ORTHO05D002463 1.6e-14 83.2 110 43.6
MELO3C018805.2 Cucumis melo HOM05D007466 ORTHO05D002463 1.6e-14 83.2 125 39.2
PSO675G1565 Papaver somniferum HOM05D007466 ORTHO05D002463 1.6e-14 83.2 120 39.2
Prupe.3G219500 Prunus persica HOM05D007466 ORTHO05D002463 2.8e-14 82.4 112 42.0
BcaC02g11328 Brassica carinata HOM05D007466 ORTHO05D002463 3.6e-14 82.0 110 40.0
PSO541G5792 Papaver somniferum HOM05D007466 ORTHO05D002463 3.6e-14 82.0 112 40.2
BolC4t23280H Brassica oleracea HOM05D007466 ORTHO05D002463 4.8e-14 81.6 110 40.0
AL4G27734 Arabidopsis lyrata HOM05D007466 ORTHO05D002463 8.1e-14 80.9 110 41.8
Thhalv10017634m.g Eutrema salsugineum HOM05D007466 ORTHO05D002463 8.1e-14 80.9 109 40.4
AL125U10032 Arabidopsis lyrata HOM05D007466 ORTHO05D002463 1.1e-13 80.5 110 41.8
AT2G32350 Arabidopsis thaliana HOM05D007466 ORTHO05D002463 1.1e-13 80.5 110 41.8
BcaB02g10474 Brassica carinata HOM05D007466 ORTHO05D002463 1.1e-13 80.5 110 40.9
CsaV3_7G003740 Cucumis sativus L. HOM05D007466 ORTHO05D002463 1.1e-13 80.5 123 38.2
Lj3g0019012 Lotus japonicus HOM05D007466 ORTHO05D002463 1.1e-13 80.5 103 42.7
Sp4g14720 Schrenkiella parvula HOM05D007466 ORTHO05D002463 2.4e-13 79.3 110 40.9
CANSAT64G0630 Cannabis sativa HOM05D007466 ORTHO05D002463 4.4e-12 75.1 111 42.3
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 9.9e-12 73.9 111 36.0
Actinidia32076 Actinidia chinensis HOM05D007466 ORTHO05D002463 4.9e-11 71.6 76 50.0
CDE05G0337 Ceratophyllum demersum HOM05D007466 ORTHO05D002463 9.3e-10 67.4 124 33.9
Thhalv10002923m.g Eutrema salsugineum HOM05D007466 ORTHO05D002463 2.7e-09 65.9 98 39.8
MBI02_g19288_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 1.9e-07 59.7 110 34.5
Rhsim06G0158800 Rhododendron simsii HOM05D007466 ORTHO05D002463 1.9e-07 59.7 75 45.3
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 4.3e-07 58.5 73 47.9
Migut.H01135 Erythranthe guttata HOM05D007466 ORTHO05D002463 4.3e-07 58.5 34 88.2
Dinv02746 Davidia involucrata HOM05D007466 ORTHO05D002463 4.8e-06 55.1 105 34.3


User provided reference genes

Program Settings