Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 2.7e-142 508.8 288 100.0
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 2.4e-50 203.4 126 73.8
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 3.0e-45 186.4 121 70.2
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 7.0e-42 175.3 121 64.5
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 2.7e-41 173.3 123 64.2
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 3.5e-41 172.9 117 68.4
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 1.1e-39 167.9 116 70.7
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 3.2e-39 166.4 124 64.5
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 3.2e-39 166.4 124 61.3
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 7.2e-39 165.2 113 68.1
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 1.2e-38 164.5 122 63.9
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 1.6e-38 164.1 121 62.8
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.6e-38 164.1 123 62.6
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.6e-38 164.1 117 63.2
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.8e-38 163.3 123 62.6
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 4.7e-38 162.5 120 63.3
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 1.0e-37 161.4 124 65.3
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 1.8e-37 160.6 117 63.2
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.8e-37 160.6 117 63.2
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 3.0e-37 159.8 121 59.5
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 3.0e-37 159.8 122 62.3
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 5.2e-37 159.1 121 61.2
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 6.8e-37 158.7 121 60.3
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 6.8e-37 158.7 118 65.3
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 1.2e-36 157.9 122 56.6
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 1.2e-36 157.9 124 64.5
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 1.2e-36 157.9 123 60.2
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 1.5e-36 157.5 122 61.5
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.6e-36 156.8 119 64.7
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 3.4e-36 156.4 111 64.9
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 9.8e-36 154.8 117 63.2
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 9.8e-36 154.8 118 62.7
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 9.8e-36 154.8 124 58.9
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.3e-35 154.5 124 60.5
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.3e-35 154.5 115 62.6
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-35 154.5 126 61.9
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 1.3e-35 154.5 119 62.2
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 1.7e-35 154.1 111 63.1
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.7e-35 154.1 125 59.2
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 2.2e-35 153.7 124 63.7
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 2.2e-35 153.7 114 64.9
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 2.2e-35 153.7 117 62.4
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.2e-35 153.7 119 62.2
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 2.2e-35 153.7 123 59.3
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 2.8e-35 153.3 118 61.9
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 4.9e-35 152.5 111 64.0
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 6.3e-35 152.1 114 62.3
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 6.3e-35 152.1 115 61.7
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 6.3e-35 152.1 113 61.1
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 8.3e-35 151.8 125 59.2
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.3e-35 151.8 119 62.2
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 8.3e-35 151.8 114 58.8
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 8.3e-35 151.8 109 64.2
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.4e-34 151.0 119 61.3
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 2.4e-34 150.2 108 64.8
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 2.4e-34 150.2 124 58.1
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 2.4e-34 150.2 125 58.4
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 3.1e-34 149.8 111 64.0
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 5.4e-34 149.1 108 63.9
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 5.4e-34 149.1 113 61.9
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 5.4e-34 149.1 113 61.9
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.4e-34 149.1 215 51.6
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 7.0e-34 148.7 122 59.0
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 7.0e-34 148.7 121 57.0
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 9.2e-34 148.3 106 65.1
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 9.2e-34 148.3 125 57.6
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 9.2e-34 148.3 111 64.0
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.2e-33 147.9 116 58.6
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.0e-33 147.1 108 63.0
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 2.0e-33 147.1 115 62.6
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 5.9e-33 145.6 112 61.6
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 7.8e-33 145.2 107 62.6
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 7.8e-33 145.2 121 59.5
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 1.0e-32 144.8 123 56.9
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 1.0e-32 144.8 124 56.5
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 1.3e-32 144.4 115 60.9
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 1.3e-32 144.4 123 56.9
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 1.3e-32 144.4 125 58.4
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 1.3e-32 144.4 124 58.1
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 1.3e-32 144.4 119 58.0
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 1.7e-32 144.1 105 63.8
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 2.3e-32 143.7 115 60.0
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 2.3e-32 143.7 111 58.6
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 2.3e-32 143.7 117 59.8
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 2.3e-32 143.7 120 57.5
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.9e-32 143.3 122 57.4
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 3.8e-32 142.9 115 60.9
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 3.8e-32 142.9 115 60.9
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 3.8e-32 142.9 115 60.9
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 3.8e-32 142.9 115 60.9
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 3.8e-32 142.9 115 60.9
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 3.8e-32 142.9 120 59.2
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 8.6e-32 141.7 106 61.3
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 1.1e-31 141.4 113 56.6
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 1.1e-31 141.4 106 61.3
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 1.1e-31 141.4 124 57.3
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.1e-31 141.4 111 57.7
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 1.5e-31 141.0 124 55.6
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 1.5e-31 141.0 124 55.6
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 1.5e-31 141.0 124 55.6
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 1.5e-31 141.0 124 55.6
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 1.5e-31 141.0 124 55.6
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 1.5e-31 141.0 124 56.5
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.5e-31 141.0 122 56.6
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 1.9e-31 140.6 115 57.4
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 2.5e-31 140.2 115 58.3
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 2.5e-31 140.2 123 53.7
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 2.5e-31 140.2 106 60.4
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 3.3e-31 139.8 123 56.1
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 4.3e-31 139.4 115 59.1
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 4.3e-31 139.4 115 59.1
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 5.6e-31 139.0 107 61.7
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 5.6e-31 139.0 123 54.5
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 1.2e-30 137.9 124 55.6
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 1.2e-30 137.9 124 55.6
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.2e-30 137.9 182 52.7
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 1.6e-30 137.5 108 62.0
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 1.6e-30 137.5 117 57.3
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 1.6e-30 137.5 129 55.0
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 1.6e-30 137.5 117 57.3
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 2.8e-30 136.7 106 60.4
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 2.8e-30 136.7 115 57.4
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 2.8e-30 136.7 115 58.3
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 3.6e-30 136.3 108 62.0
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 3.6e-30 136.3 182 52.2
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 6.1e-30 135.6 118 54.2
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 8.0e-30 135.2 112 56.2
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 1.8e-29 134.0 115 57.4
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 1.8e-29 134.0 109 57.8
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 3.0e-29 133.3 120 54.2
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 3.0e-29 133.3 104 60.6
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 5.2e-29 132.5 123 56.1
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.2e-28 131.3 129 52.7
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 1.5e-28 131.0 103 61.2
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 2.0e-28 130.6 107 57.0
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 5.7e-28 129.0 118 54.2
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 5.7e-28 129.0 116 54.3
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 1.3e-27 127.9 106 57.5
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.3e-27 127.9 124 52.4
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 2.9e-27 126.7 104 59.6
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 4.9e-27 125.9 126 53.2
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 1.1e-26 124.8 104 57.7
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 2.0e-25 120.6 105 54.3
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.0e-25 120.6 134 50.7
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 4.6e-25 119.4 105 53.3
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 2.3e-24 117.1 121 53.7
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 8.6e-24 115.2 106 54.7
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 1.1e-23 114.8 110 48.2
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.1e-23 114.8 103 54.4
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 1.5e-23 114.4 112 50.0
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 9.5e-23 111.7 114 49.1
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 9.5e-23 111.7 115 51.3
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 2.1e-22 110.5 103 51.5
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 2.1e-22 110.5 121 47.9
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 6.2e-22 109.0 121 44.6
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 8.0e-22 108.6 123 48.0
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 1.4e-21 107.8 107 52.3
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 3.1e-21 106.7 104 50.0
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 4.0e-21 106.3 122 46.7
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 5.2e-21 105.9 109 50.5
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 6.8e-21 105.5 109 50.5
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 6.8e-21 105.5 109 50.5
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 6.8e-21 105.5 109 50.5
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.5e-20 104.4 90 57.8
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 5.8e-20 102.4 109 50.5
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.3e-19 101.3 91 51.6
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 6.0e-17 92.4 123 43.9
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 7.8e-17 92.0 106 45.3
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.1e-13 81.6 139 37.4
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 1.4e-13 81.3 107 42.1
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 7.5e-12 75.5 105 42.9
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 2.9e-11 73.6 108 43.5
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 6.4e-11 72.4 132 37.1
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 5.4e-10 69.3 128 39.1
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.7e-09 67.0 64 53.1
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.0e-08 65.1 123 37.4
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 6.6e-08 62.4 108 38.9
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 2.5e-07 60.5 38 57.9
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla HOM05D003750 ORTHO05D004337 4.3e-07 59.7 29 65.5
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 2.1e-06 57.4 119 35.3
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 2.1e-06 57.4 89 43.8
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.1e-06 57.4 115 35.7
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 6.2e-06 55.8 113 31.9
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 8.1e-06 55.5 119 36.1
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 8.1e-06 55.5 88 42.0


User provided reference genes

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