Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 5.6e-107 391.0 199 100.0
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 8.8e-36 154.5 173 55.5
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 1.3e-31 140.6 184 54.9
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 2.7e-24 116.3 127 52.8
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 3.5e-24 115.9 134 50.0
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.7e-23 113.6 142 50.7
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.9e-23 112.8 134 47.8
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 3.8e-23 112.5 136 51.5
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.6e-23 111.3 162 46.3
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 8.6e-23 111.3 131 51.1
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 8.6e-23 111.3 169 46.2
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.1e-22 110.9 175 45.7
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.5e-22 110.5 130 51.5
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 4.3e-22 109.0 172 44.8
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 4.3e-22 109.0 134 47.0
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 9.5e-22 107.8 134 45.5
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 9.5e-22 107.8 134 45.5
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 9.5e-22 107.8 134 45.5
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.2e-21 107.5 134 47.0
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 1.6e-21 107.1 129 48.8
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.1e-21 106.7 116 50.9
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 2.1e-21 106.7 130 50.8
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 2.1e-21 106.7 128 50.0
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 2.8e-21 106.3 135 44.4
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 2.8e-21 106.3 110 53.6
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.8e-21 106.3 107 55.1
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 2.8e-21 106.3 131 50.4
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 4.7e-21 105.5 187 40.1
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 6.1e-21 105.1 120 50.8
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 6.1e-21 105.1 131 48.1
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 6.1e-21 105.1 122 50.0
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 6.1e-21 105.1 114 50.0
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 8.0e-21 104.8 121 49.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 8.0e-21 104.8 110 52.7
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 8.0e-21 104.8 134 45.5
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 8.0e-21 104.8 174 42.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.0e-20 104.4 134 44.8
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.0e-20 104.4 134 44.8
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 1.8e-20 103.6 129 46.5
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 3.0e-20 102.8 134 44.8
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 3.0e-20 102.8 177 41.8
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 3.0e-20 102.8 177 41.8
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 5.2e-20 102.1 107 53.3
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 5.2e-20 102.1 120 49.2
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.2e-20 102.1 120 49.2
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 6.8e-20 101.7 116 48.3
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 6.8e-20 101.7 128 47.7
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 6.8e-20 101.7 168 39.9
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 8.9e-20 101.3 116 48.3
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 8.9e-20 101.3 124 46.8
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 8.9e-20 101.3 122 49.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.9e-20 101.3 109 51.4
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.9e-20 101.3 109 51.4
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 8.9e-20 101.3 177 41.8
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 8.9e-20 101.3 107 49.5
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.2e-19 100.9 129 47.3
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.2e-19 100.9 167 40.1
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.5e-19 100.5 171 38.6
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.5e-19 100.5 184 41.8
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.0e-19 100.1 172 37.8
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 2.0e-19 100.1 107 51.4
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.0e-19 100.1 109 50.5
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 2.0e-19 100.1 139 46.8
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 3.4e-19 99.4 176 42.0
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 5.7e-19 98.6 131 45.8
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 7.5e-19 98.2 107 51.4
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 7.5e-19 98.2 107 51.4
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 7.5e-19 98.2 139 42.4
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.3e-18 97.4 184 41.3
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.3e-18 97.4 145 40.7
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.3e-18 97.4 152 43.4
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.7e-18 97.1 174 38.5
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.2e-18 96.7 139 43.2
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 2.2e-18 96.7 131 44.3
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 3.7e-18 95.9 189 40.2
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 3.7e-18 95.9 128 44.5
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 4.9e-18 95.5 170 38.2
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 6.4e-18 95.1 167 39.5
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.4e-18 95.1 112 45.5
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 6.4e-18 95.1 140 40.0
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.8e-17 93.6 183 37.2
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 2.4e-17 93.2 112 45.5
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 2.4e-17 93.2 175 37.7
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 2.4e-17 93.2 192 39.6
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.6e-16 90.5 175 37.1
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.6e-16 90.5 173 38.2
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 3.5e-16 89.4 126 42.9
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 4.6e-16 89.0 162 40.1
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 7.8e-16 88.2 51 78.4
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 7.8e-16 88.2 107 44.9
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.0e-15 87.8 157 39.5
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 3.0e-15 86.3 119 42.0
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.8e-12 77.0 158 39.2
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 2.6e-11 73.2 43 74.4
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 5.8e-11 72.0 42 76.2
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.8e-11 72.0 77 50.6
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 9.8e-11 71.2 75 49.3
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.7e-10 70.5 55 58.2
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.3e-07 60.8 42 61.9


User provided reference genes

Program Settings