Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 6.4e-73 277.3 141 100.0
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 9.6e-53 210.3 143 72.7
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 1.4e-51 206.5 148 73.6
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.4e-51 205.7 118 82.2
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.4e-51 205.7 118 82.2
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 1.1e-48 196.8 130 75.4
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 1.4e-48 196.4 128 75.0
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 2.4e-48 195.7 133 69.9
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 2.4e-48 195.7 121 76.0
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.2e-48 195.3 130 75.4
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 3.2e-48 195.3 164 61.6
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 4.2e-48 194.9 133 72.2
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 4.2e-48 194.9 130 75.4
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 1.2e-47 193.4 128 71.1
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.6e-47 193.0 118 76.3
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 2.1e-47 192.6 128 71.1
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 2.1e-47 192.6 128 71.1
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 2.1e-47 192.6 146 69.2
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 4.6e-47 191.4 134 67.9
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 4.6e-47 191.4 138 68.1
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 6.0e-47 191.0 114 78.1
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 7.9e-47 190.7 120 75.8
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 7.9e-47 190.7 118 76.3
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.0e-46 190.3 128 69.5
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.0e-46 190.3 128 69.5
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.8e-46 189.5 115 78.3
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.3e-46 189.1 134 67.9
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 2.3e-46 189.1 122 73.0
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 3.0e-46 188.7 138 65.2
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 6.7e-46 187.6 133 67.7
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 6.7e-46 187.6 136 66.9
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 1.1e-45 186.8 134 68.7
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 1.9e-45 186.0 123 74.0
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.9e-45 186.0 122 73.8
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 3.3e-45 185.3 122 76.2
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 3.3e-45 185.3 122 76.2
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 3.3e-45 185.3 138 66.7
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 3.3e-45 185.3 136 64.0
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 3.3e-45 185.3 140 67.9
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 5.6e-45 184.5 120 73.3
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 5.6e-45 184.5 143 62.9
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 5.6e-45 184.5 142 64.1
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 9.6e-45 183.7 129 72.9
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 9.6e-45 183.7 129 72.9
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 1.6e-44 183.0 132 71.2
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.6e-44 183.0 114 73.7
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.1e-44 182.6 117 73.5
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 2.1e-44 182.6 135 65.9
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 3.7e-44 181.8 120 75.0
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 3.7e-44 181.8 116 73.3
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 3.7e-44 181.8 133 64.7
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 3.7e-44 181.8 139 68.3
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 3.7e-44 181.8 141 64.5
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 3.7e-44 181.8 141 64.5
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 4.8e-44 181.4 135 68.9
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 4.8e-44 181.4 139 64.7
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 4.8e-44 181.4 121 71.9
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 4.8e-44 181.4 121 71.9
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 8.1e-44 180.6 132 72.0
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 8.1e-44 180.6 140 66.4
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 1.1e-43 180.3 118 72.9
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 1.1e-43 180.3 122 72.1
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 4.0e-43 178.3 135 63.7
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 4.0e-43 178.3 136 61.8
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 5.3e-43 177.9 108 77.8
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.5e-42 176.4 118 66.9
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 1.5e-42 176.4 115 72.2
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.5e-42 176.4 118 69.5
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 1.5e-42 176.4 147 65.3
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 2.0e-42 176.0 130 66.9
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 7.6e-42 174.1 121 66.9
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 1.0e-41 173.7 139 61.9
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.7e-41 172.9 118 66.1
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 2.2e-41 172.6 138 60.9
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 2.2e-41 172.6 193 50.3
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 2.9e-41 172.2 131 62.6
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 2.9e-41 172.2 137 63.5
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 8.4e-41 170.6 143 60.8
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 8.4e-41 170.6 116 69.8
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 2.5e-40 169.1 147 62.6
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 4.2e-40 168.3 142 64.1
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 5.5e-40 167.9 118 66.1
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 1.2e-39 166.8 118 66.9
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 3.5e-39 165.2 115 68.7
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 7.9e-39 164.1 121 66.1
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 5.1e-38 161.4 134 63.4
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 2.8e-36 155.6 118 68.6
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 4.5e-34 148.3 90 77.8
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 5.9e-34 147.9 113 61.9
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 5.0e-33 144.8 121 60.3
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 1.9e-32 142.9 90 73.3
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.2e-31 140.2 102 68.6
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 3.0e-30 135.6 121 57.9
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 3.0e-30 135.6 117 57.3
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 6.7e-30 134.4 121 57.9
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 8.7e-30 134.0 138 56.5
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.1e-29 133.7 121 57.9
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 1.6e-28 129.8 139 50.4
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 4.1e-27 125.2 87 66.7
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 5.3e-27 124.8 118 51.7
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 6.9e-27 124.4 89 68.5
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.2e-26 123.6 98 62.2
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 1.5e-26 123.2 138 50.7
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 1.3e-25 120.2 109 55.0
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 3.2e-24 115.5 95 60.0
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.4e-22 110.2 76 71.1
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 6.3e-20 101.3 69 72.5
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 6.3e-20 101.3 62 77.4
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.9e-17 92.4 53 81.1
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.6e-15 85.5 55 72.7
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.3e-13 79.0 93 50.5
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 3.3e-13 79.0 51 68.6
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 4.4e-13 78.6 48 75.0
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 4.5e-10 68.6 80 50.0
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 1.3e-09 67.0 102 33.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 2.1e-07 59.7 50 46.0


User provided reference genes

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