Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02018 Erythranthe guttata HOM05D004150 ORTHO05D005087 3.1e-281 971.1 474 100.0
SGA_v2.0_scaffold130G34274 Striga asiatica HOM05D004150 ORTHO05D005087 2.4e-196 689.1 438 76.3
MSTRG.14976 Avicennia marina HOM05D004150 ORTHO05D005087 2.4e-188 662.5 435 73.3
Cc05_g10890 Coffea canephora HOM05D004150 ORTHO05D005087 4.1e-188 661.8 435 74.0
Oeu058459.1 Olea europaea HOM05D004150 ORTHO05D005087 6.9e-188 661.0 475 69.9
SalBow7G0391 Salvia bowleyana HOM05D004150 ORTHO05D005087 1.5e-187 659.8 436 75.0
Hma1.2p1_2701F.1_g327060 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 2.3e-183 646.0 435 71.7
Oeu010027.3 Olea europaea HOM05D004150 ORTHO05D005087 1.3e-181 640.2 461 69.4
CAN.G375.32 Capsicum annuum HOM05D004150 ORTHO05D005087 1.6e-181 639.8 480 65.6
CSS0042666 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 4.1e-180 635.2 436 71.3
GSVIVG01014152001 Vitis vinifera HOM05D004150 ORTHO05D005087 2.0e-179 632.9 438 71.5
Cfa019528 Carpinus fangiana HOM05D004150 ORTHO05D005087 5.9e-179 631.3 437 70.5
Sopen07g030520 Solanum pennellii HOM05D004150 ORTHO05D005087 5.0e-178 628.2 479 64.7
Solyc07g062250.3 Solanum lycopersicum HOM05D004150 ORTHO05D005087 8.5e-178 627.5 479 64.7
PGSC0003DMG400007094 Solanum tuberosum HOM05D004150 ORTHO05D005087 4.2e-177 625.2 478 64.9
CSS0001873 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 1.4e-175 620.2 437 68.6
Psat5g234480 Pisum sativum HOM05D004150 ORTHO05D005087 1.4e-175 620.2 437 68.6
Potri.003G026500 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.8e-175 619.8 438 69.6
Manes.03G091700 Manihot esculenta HOM05D004150 ORTHO05D005087 2.3e-175 619.4 438 69.6
TAR629G2423 Trochodendron aralioides HOM05D004150 ORTHO05D005087 8.8e-175 617.5 435 67.6
PGR083G0816 Punica granatum HOM05D004150 ORTHO05D005087 1.1e-174 617.1 443 67.0
MD03G1246300 Malus domestica HOM05D004150 ORTHO05D005087 2.6e-174 615.9 441 69.8
VMungo1080G1533 Vigna mungo HOM05D004150 ORTHO05D005087 4.4e-174 615.1 440 68.9
TWI38G0344 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 1.7e-173 613.2 444 68.9
Ca_03941_v3 Cicer arietinum L. HOM05D004150 ORTHO05D005087 2.8e-173 612.5 438 67.6
Potri.011G106600 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.1e-172 610.5 440 68.2
Glyma.13G266400 Glycine max HOM05D004150 ORTHO05D005087 1.8e-172 609.8 440 67.7
CiPaw.11G157600 Carya illinoinensis HOM05D004150 ORTHO05D005087 6.9e-172 607.8 437 68.0
Nitab4.5_0000347g0180 Nicotiana tabacum HOM05D004150 ORTHO05D005087 6.9e-172 607.8 479 63.0
Peaxi162Scf00111g01477 Petunia axillaris HOM05D004150 ORTHO05D005087 6.9e-172 607.8 480 63.8
COL.COLO4_17523 Corchorus olitorius HOM05D004150 ORTHO05D005087 2.0e-171 606.3 434 68.2
RcHm_v2.0_Chr5g0030011 Rosa chinensis HOM05D004150 ORTHO05D005087 1.0e-170 604.0 439 69.0
Phvul.005G079200 Phaseolus vulgaris HOM05D004150 ORTHO05D005087 1.7e-170 603.2 440 67.5
Glyma.12G231700 Glycine max HOM05D004150 ORTHO05D005087 2.9e-170 602.4 438 67.6
Medtr2g075340 Medicago truncatula HOM05D004150 ORTHO05D005087 3.8e-170 602.1 432 66.2
Lsat_1_v5_gn_9_100501 Lactuca sativa HOM05D004150 ORTHO05D005087 5.0e-170 601.7 439 67.4
Manes.15G097400 Manihot esculenta HOM05D004150 ORTHO05D005087 5.0e-170 601.7 437 66.4
Lj1A826G61 Lonicera japonica HOM05D004150 ORTHO05D005087 8.5e-170 600.9 446 66.8
Thecc.07G119700 Theobroma cacao HOM05D004150 ORTHO05D005087 1.1e-169 600.5 436 66.7
Eucgr.F01300 Eucalyptus grandis HOM05D004150 ORTHO05D005087 2.5e-169 599.4 442 65.4
EL10Ac4g08396 Beta vulgaris HOM05D004150 ORTHO05D005087 7.2e-169 597.8 435 66.0
Atru.chr2.2029 Acer truncatum HOM05D004150 ORTHO05D005087 1.6e-168 596.7 442 68.1
CsaV3_4G032910 Cucumis sativus L. HOM05D004150 ORTHO05D005087 1.6e-168 596.7 439 67.2
Sed0003063 Sechium edule HOM05D004150 ORTHO05D005087 2.7e-168 595.9 436 66.3
Atru.chr2.2041 Acer truncatum HOM05D004150 ORTHO05D005087 1.4e-167 593.6 442 67.9
TWI39G0561 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 2.3e-167 592.8 440 66.1
Gohir.A01G052900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 3.0e-167 592.4 434 66.1
MD11G1267300 Malus domestica HOM05D004150 ORTHO05D005087 6.7e-167 591.3 441 67.3
Nn6g34456 Nelumbo nucifera HOM05D004150 ORTHO05D005087 6.7e-167 591.3 436 65.1
Lj3g0004524 Lotus japonicus HOM05D004150 ORTHO05D005087 8.8e-167 590.9 442 67.4
CANSAT56G2087 Cannabis sativa HOM05D004150 ORTHO05D005087 1.5e-166 590.1 439 65.8
Gorai.002G053300 Gossypium raimondii HOM05D004150 ORTHO05D005087 1.5e-166 590.1 435 66.0
HanXRQChr10g0305531 Helianthus annuus HOM05D004150 ORTHO05D005087 2.0e-166 589.7 442 67.2
Dinv15009 Davidia involucrata HOM05D004150 ORTHO05D005087 2.6e-166 589.3 386 73.6
Gohir.D13G154200 Gossypium hirsutum HOM05D004150 ORTHO05D005087 5.7e-166 588.2 431 65.7
Actinidia21439 Actinidia chinensis HOM05D004150 ORTHO05D005087 7.4e-166 587.8 437 67.0
Gohir.A13G149900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 7.4e-166 587.8 434 65.7
Gohir.D01G042500 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.7e-165 586.6 435 65.7
FvH4_3g17970 Fragaria vesca HOM05D004150 ORTHO05D005087 6.3e-165 584.7 440 67.3
Sabra16G0254300 Salix brachista HOM05D004150 ORTHO05D005087 8.2e-165 584.3 487 62.2
Sc03g0010640 Simmondsia chinensis HOM05D004150 ORTHO05D005087 1.8e-164 583.2 439 65.4
FAN21G0088 Fragaria x ananassa HOM05D004150 ORTHO05D005087 2.4e-164 582.8 441 67.8
MELO3C025660.2 Cucumis melo HOM05D004150 ORTHO05D005087 2.0e-163 579.7 450 64.2
MBI06_g16571_MAGBIO Magnolia biondii HOM05D004150 ORTHO05D005087 2.6e-163 579.3 436 64.7
PSO170G1443 Papaver somniferum HOM05D004150 ORTHO05D005087 2.2e-162 576.2 445 63.6
ClCG11G017260 Citrullus lanatus HOM05D004150 ORTHO05D005087 5.0e-162 575.1 511 57.9
Ciclev10019972m.g Citrus clementina HOM05D004150 ORTHO05D005087 6.5e-162 574.7 443 65.7
vmacro09408 Vaccinium macrocarpon HOM05D004150 ORTHO05D005087 2.5e-161 572.8 457 64.6
Rhsim04G0036400 Rhododendron simsii HOM05D004150 ORTHO05D005087 4.2e-161 572.0 446 66.4
PSO782G0021 Papaver somniferum HOM05D004150 ORTHO05D005087 1.6e-160 570.1 445 63.1
Aqoxy1G01964 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 2.1e-160 569.7 434 63.1
Rhsim04G0035400 Rhododendron simsii HOM05D004150 ORTHO05D005087 2.1e-160 569.7 446 66.1
THA.LOC104815577 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 4.0e-159 565.5 439 63.8
Gorai.013G174200 Gossypium raimondii HOM05D004150 ORTHO05D005087 8.8e-159 564.3 483 58.8
FAN25G1025 Fragaria x ananassa HOM05D004150 ORTHO05D005087 2.0e-158 563.1 478 62.6
FAN16G0401 Fragaria x ananassa HOM05D004150 ORTHO05D005087 1.3e-157 560.5 476 62.4
THA.LOC104810428 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 2.8e-157 559.3 439 62.9
Dinv18386 Davidia involucrata HOM05D004150 ORTHO05D005087 3.7e-157 558.9 386 69.9
Lalb_Chr25g0285681 Lupinus albus HOM05D004150 ORTHO05D005087 3.7e-157 558.9 439 64.2
TAR627G0919 Trochodendron aralioides HOM05D004150 ORTHO05D005087 4.8e-157 558.5 387 69.0
Actinidia12595 Actinidia chinensis HOM05D004150 ORTHO05D005087 1.1e-156 557.4 502 56.4
FAN11G2611 Fragaria x ananassa HOM05D004150 ORTHO05D005087 1.8e-156 556.6 459 63.4
TPR.G13030 Trifolium pratense HOM05D004150 ORTHO05D005087 2.4e-156 556.2 440 63.0
Lalb_Chr19g0133751 Lupinus albus HOM05D004150 ORTHO05D005087 3.1e-156 555.8 440 63.0
HanXRQChr17g0556791 Helianthus annuus HOM05D004150 ORTHO05D005087 3.5e-155 552.4 436 63.3
Prupe.4G158300 Prunus persica HOM05D004150 ORTHO05D005087 1.3e-154 550.4 405 68.1
ECA234G0958 Erigeron canadensis HOM05D004150 ORTHO05D005087 2.5e-153 546.2 443 62.3
Potri.001G386700 Populus trichocarpa HOM05D004150 ORTHO05D005087 4.2e-153 545.4 389 69.2
Aa31LG8G2040 Aethionema arabicum HOM05D004150 ORTHO05D005087 2.1e-152 543.1 437 61.6
AUR62019617 Chenopodium quinoa HOM05D004150 ORTHO05D005087 2.1e-152 543.1 437 61.6
AT3G14830 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 4.7e-152 542.0 442 62.0
AL3G27140 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 1.0e-151 540.8 440 61.8
AUR62039606 Chenopodium quinoa HOM05D004150 ORTHO05D005087 1.8e-151 540.0 437 61.6
Lalb_Chr03g0031251 Lupinus albus HOM05D004150 ORTHO05D005087 1.2e-150 537.3 466 59.4
CARHR089770 Cardamine hirsuta HOM05D004150 ORTHO05D005087 2.6e-150 536.2 440 60.2
Sp1g39990 Schrenkiella parvula HOM05D004150 ORTHO05D005087 3.7e-149 532.3 435 61.1
Ah.04g164080 Amaranthus hybridus HOM05D004150 ORTHO05D005087 2.4e-148 529.6 440 60.7
CARHR043670 Cardamine hirsuta HOM05D004150 ORTHO05D005087 1.6e-147 526.9 435 60.5
Thhalv10011465m.g Eutrema salsugineum HOM05D004150 ORTHO05D005087 8.6e-146 521.2 435 60.5
Duzib213G1096 Durio zibethinus HOM05D004150 ORTHO05D005087 1.9e-145 520.0 433 61.2
BolC5t33929H Brassica oleracea HOM05D004150 ORTHO05D005087 1.6e-144 516.9 441 60.1
Carub.0003s1449 Capsella rubella HOM05D004150 ORTHO05D005087 2.8e-144 516.2 444 58.8
BcaC05g29034 Brassica carinata HOM05D004150 ORTHO05D005087 1.4e-143 513.8 441 59.9
C05p52450 Brassica napus HOM05D004150 ORTHO05D005087 4.0e-143 512.3 441 59.6
Hund10457 Selenicereus undatus HOM05D004150 ORTHO05D005087 4.0e-143 512.3 438 59.8
Sabra11G0094900 Salix brachista HOM05D004150 ORTHO05D005087 6.8e-143 511.5 434 61.5
BcaB06g25355 Brassica carinata HOM05D004150 ORTHO05D005087 1.5e-142 510.4 440 59.8
BraA05t22282Z Brassica rapa HOM05D004150 ORTHO05D005087 3.4e-142 509.2 439 60.1
Carub.0001s4264 Capsella rubella HOM05D004150 ORTHO05D005087 5.7e-142 508.4 435 58.9
A05p34660 Brassica napus HOM05D004150 ORTHO05D005087 7.5e-142 508.1 440 60.0
BraA06t23329Z Brassica rapa HOM05D004150 ORTHO05D005087 4.9e-141 505.4 439 58.3
A06p01010 Brassica napus HOM05D004150 ORTHO05D005087 1.4e-140 503.8 439 58.3
AT1G53450 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 3.1e-140 502.7 438 58.4
BcaC08g43529 Brassica carinata HOM05D004150 ORTHO05D005087 4.1e-140 502.3 439 57.6
BolC6t35999H Brassica oleracea HOM05D004150 ORTHO05D005087 4.1e-140 502.3 439 57.6
C06p09220 Brassica napus HOM05D004150 ORTHO05D005087 7.8e-139 498.0 439 57.6
BcaB07g33329 Brassica carinata HOM05D004150 ORTHO05D005087 1.3e-138 497.3 436 57.1
ATR0127G006 Amborella trichopoda HOM05D004150 ORTHO05D005087 6.6e-138 495.0 470 55.7
unitig_21.g20061 Utricularia gibba HOM05D004150 ORTHO05D005087 6.8e-135 485.0 434 57.8
Nn3g21055 Nelumbo nucifera HOM05D004150 ORTHO05D005087 2.6e-134 483.0 395 61.0
CiPaw.12G111300 Carya illinoinensis HOM05D004150 ORTHO05D005087 1.6e-131 473.8 355 66.5
Zm00001eb361900 Zea mays HOM05D004150 ORTHO05D005087 8.9e-127 458.0 455 52.3
Os01g0729900 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 1.7e-125 453.8 455 50.8
ECA240G3777 Erigeron canadensis HOM05D004150 ORTHO05D005087 3.2e-124 449.5 358 62.3
Zm00001eb154220 Zea mays HOM05D004150 ORTHO05D005087 3.2e-124 449.5 456 51.3
CDE06G0863 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 2.7e-123 446.4 435 53.3
Os05g0530300 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 8.3e-117 424.9 470 47.2
HPP92_005189 Vanilla planifolia HOM05D004150 ORTHO05D005087 4.1e-116 422.5 396 54.5
QL08p025853 Quercus lobata HOM05D004150 ORTHO05D005087 7.1e-116 421.8 253 77.5
Nitab4.5_0024430g0010 Nicotiana tabacum HOM05D004150 ORTHO05D005087 2.1e-112 410.2 249 76.3
Cpa.g.sc77.46 Carica papaya HOM05D004150 ORTHO05D005087 2.0e-110 403.7 245 75.5
AL1G61960 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 2.2e-101 373.6 281 61.2
SMO169G0186 Selaginella moellendorffii HOM05D004150 ORTHO05D005087 3.6e-96 356.3 248 66.1
DCAR_013267 Daucus carota HOM05D004150 ORTHO05D005087 9.0e-95 351.7 252 63.5
CDE02G2021 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 3.4e-94 349.7 292 57.9
AagrBONN_evm.TU.Sc2ySwM_362.2802 Anthoceros agrestis HOM05D004150 ORTHO05D005087 1.3e-93 347.8 490 41.4
Mapoly0001s0101 Marchantia polymorpha HOM05D004150 ORTHO05D005087 3.9e-90 336.3 545 37.4
Os06g0152800 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 8.7e-90 335.1 254 60.6
Hma1.2p1_1650F.1_g295710 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 1.3e-88 331.3 295 59.7
Pp3c9_8060 Physcomitrium patens HOM05D004150 ORTHO05D005087 6.4e-85 318.9 498 39.2
Zm00001eb271010 Zea mays HOM05D004150 ORTHO05D005087 7.1e-84 315.5 261 55.9
Zm00001eb293260 Zea mays HOM05D004150 ORTHO05D005087 9.6e-81 305.1 377 45.9
SEGI_28417 Sequoiadendron giganteum HOM05D004150 ORTHO05D005087 4.8e-80 302.8 351 43.6
Mapoly0030s0045 Marchantia polymorpha HOM05D004150 ORTHO05D005087 9.7e-65 251.9 433 37.2
Haze_09266 Corylus avellana HOM05D004150 ORTHO05D005087 1.2e-51 208.4 215 52.6
Gohir.A02G079101 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.6e-43 181.4 142 61.3
Haze_09270 Corylus avellana HOM05D004150 ORTHO05D005087 2.3e-42 177.6 166 55.4
QL08p025867 Quercus lobata HOM05D004150 ORTHO05D005087 1.2e-41 175.3 188 54.8
EL10Ac9g22809 Beta vulgaris HOM05D004150 ORTHO05D005087 2.0e-41 174.5 118 68.6
Gohir.D04G018433 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.9e-36 157.9 93 76.3
Gorai.001G168800 Gossypium raimondii HOM05D004150 ORTHO05D005087 3.2e-36 157.1 90 77.8
AL1G62010 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 4.2e-36 156.8 123 68.3
Gorai.010G164000 Gossypium raimondii HOM05D004150 ORTHO05D005087 1.2e-35 155.2 90 76.7
Haze_09267 Corylus avellana HOM05D004150 ORTHO05D005087 6.1e-35 152.9 143 54.5
Haze_09268 Corylus avellana HOM05D004150 ORTHO05D005087 6.1e-35 152.9 143 54.5
Gohir.A11G228702 Gossypium hirsutum HOM05D004150 ORTHO05D005087 8.0e-35 152.5 90 75.6
VMungo1309G1261 Vigna mungo HOM05D004150 ORTHO05D005087 7.5e-33 146.0 108 64.8
Actinidia33318 Actinidia chinensis HOM05D004150 ORTHO05D005087 9.8e-33 145.6 174 46.6
Aqoxy1G01962 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 6.1e-27 126.3 132 48.5
BolC5t30531H Brassica oleracea HOM05D004150 ORTHO05D032065 4.9e-24 116.7 169 40.2
CDE09G0238 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 3.5e-22 110.5 110 46.4
Haze_11864 Corylus avellana HOM05D004150 ORTHO05D005087 1.1e-20 105.5 151 42.4
VMungo0251G3124 Vigna mungo HOM05D004150 ORTHO05D005087 5.4e-15 86.7 72 56.9
ECA240G1314 Erigeron canadensis HOM05D000062 ORTHO05D000043 1.2e-09 68.9 44 68.2
arahy.Tifrunner.gnm1.ann1.H8RDCT Arachis hypogaea HOM05D004150 ORTHO05D005087 5.8e-09 66.6 48 64.6
arahy.Tifrunner.gnm1.ann1.R67SZW Arachis hypogaea HOM05D004150 ORTHO05D005087 5.8e-09 66.6 48 64.6


User provided reference genes

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