Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 9.3e-69 263.5 137 100.0
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 2.2e-30 136.0 128 60.2
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 3.8e-30 135.2 123 58.5
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 8.5e-30 134.0 120 56.7
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 3.2e-29 132.1 124 55.6
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 9.4e-29 130.6 121 57.0
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 6.1e-28 127.9 116 56.0
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 1.0e-27 127.1 132 51.5
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 1.8e-27 126.3 121 54.5
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 3.0e-27 125.6 115 56.5
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 3.9e-27 125.2 132 49.2
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 6.7e-27 124.4 115 55.7
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 8.8e-27 124.0 123 52.0
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 1.1e-26 123.6 115 53.9
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 1.5e-26 123.2 131 51.9
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 1.5e-26 123.2 108 58.3
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-26 122.5 124 50.8
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-26 122.5 124 50.8
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-26 122.5 124 50.8
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-26 122.5 124 50.8
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.6e-26 122.5 124 50.8
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 3.3e-26 122.1 132 50.0
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 5.7e-26 121.3 126 52.4
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 5.7e-26 121.3 124 50.8
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 5.7e-26 121.3 111 55.9
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 5.7e-26 121.3 120 55.0
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.4e-26 120.9 124 50.0
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.4e-26 120.9 124 50.0
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 9.7e-26 120.6 116 51.7
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 9.7e-26 120.6 105 60.0
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 9.7e-26 120.6 115 55.7
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 1.3e-25 120.2 110 56.4
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.3e-25 120.2 134 47.8
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 1.3e-25 120.2 108 55.6
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 1.7e-25 119.8 120 51.7
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 2.2e-25 119.4 111 53.2
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 2.2e-25 119.4 115 53.0
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.2e-25 119.4 124 50.0
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.8e-25 119.0 112 52.7
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 3.7e-25 118.6 136 48.5
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 6.3e-25 117.9 115 50.4
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 6.3e-25 117.9 115 54.8
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.8e-24 116.3 120 51.7
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 2.4e-24 115.9 108 56.5
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.1e-24 115.5 131 48.1
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 4.1e-24 115.2 132 47.7
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 4.1e-24 115.2 122 46.7
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 7.0e-24 114.4 116 51.7
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 7.0e-24 114.4 114 50.9
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 1.2e-23 113.6 125 49.6
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 1.2e-23 113.6 108 54.6
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 1.6e-23 113.2 103 54.4
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 1.6e-23 113.2 124 47.6
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 2.0e-23 112.8 102 56.9
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 2.6e-23 112.5 128 47.7
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.5e-23 112.1 124 48.4
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 3.5e-23 112.1 105 52.4
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 4.5e-23 111.7 112 51.8
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 4.5e-23 111.7 113 52.2
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 5.9e-23 111.3 124 46.8
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 7.7e-23 110.9 124 48.4
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 7.7e-23 110.9 127 45.7
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 1.0e-22 110.5 116 48.3
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.0e-22 110.5 124 48.4
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 1.3e-22 110.2 133 46.6
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 1.7e-22 109.8 102 55.9
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 1.7e-22 109.8 116 52.6
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 5.0e-22 108.2 113 52.2
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 5.0e-22 108.2 124 46.8
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 6.5e-22 107.8 99 55.6
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 8.5e-22 107.5 99 59.6
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 8.5e-22 107.5 120 50.0
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 1.1e-21 107.1 131 43.5
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.9e-21 106.3 97 57.7
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 1.9e-21 106.3 127 43.3
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 2.5e-21 105.9 121 47.1
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 2.5e-21 105.9 117 47.9
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.2e-21 105.5 97 53.6
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 3.2e-21 105.5 127 45.7
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 5.5e-21 104.8 115 50.4
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 5.5e-21 104.8 100 55.0
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 5.5e-21 104.8 115 48.7
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 9.4e-21 104.0 121 46.3
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 1.2e-20 103.6 110 49.1
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 2.1e-20 102.8 142 40.1
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 2.1e-20 102.8 126 45.2
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 2.7e-20 102.4 108 49.1
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 4.7e-20 101.7 124 42.7
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 4.7e-20 101.7 122 44.3
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 6.1e-20 101.3 126 42.9
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 8.0e-20 100.9 114 50.9
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 8.0e-20 100.9 124 44.4
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 1.0e-19 100.5 106 49.1
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 3.0e-19 99.0 110 50.9
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 3.0e-19 99.0 131 40.5
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 3.0e-19 99.0 105 48.6
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 2.0e-18 96.3 106 49.1
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 2.6e-18 95.9 103 47.6
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 2.6e-18 95.9 103 47.6
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 3.4e-18 95.5 97 53.6
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 5.7e-18 94.7 113 46.0
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 2.2e-17 92.8 136 37.5
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 6.3e-17 91.3 63 63.5
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 8.3e-17 90.9 93 48.4
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 8.3e-17 90.9 105 47.6
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 1.1e-16 90.5 98 49.0
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 1.1e-16 90.5 125 44.8
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 4.1e-16 88.6 107 47.7
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 5.3e-16 88.2 78 55.1
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 2.0e-15 86.3 119 42.0
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 1.7e-14 83.2 125 42.4
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 2.2e-14 82.8 89 47.2
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 2.9e-14 82.4 109 43.1
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 2.9e-14 82.4 80 48.8
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 5.0e-14 81.6 95 45.3
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.1e-13 80.5 58 65.5
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 1.1e-13 80.5 105 42.9
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 5.5e-13 78.2 86 44.2
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 7.2e-13 77.8 77 51.9
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 8.0e-12 74.3 122 38.5
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.8e-11 73.2 95 43.2
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 2.6e-10 69.3 104 33.7
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 7.5e-10 67.8 112 38.4
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 1.3e-09 67.0 70 48.6
QL08p019959 Quercus lobata HOM05D005439 ORTHO05D006793 8.3e-09 64.3 43 69.8
BolC9t58901H Brassica oleracea HOM05D005439 ORTHO05D006793 3.1e-08 62.4 67 50.7
BcaC04g18875 Brassica carinata HOM05D005439 ORTHO05D006793 4.1e-08 62.0 67 50.7
FAN09G1944 Fragaria x ananassa HOM05D005439 ORTHO05D006793 7.0e-08 61.2 50 56.0
FAN02G1859 Fragaria x ananassa HOM05D005439 ORTHO05D006793 9.1e-08 60.8 50 56.0
SGA_v2.0_scaffold4G02008 Striga asiatica HOM05D000346 ORTHO05D000326 7.7e-07 57.8 47 61.7


User provided reference genes

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