Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.4e-57 226.1 114 100.0
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 4.6e-53 211.1 115 93.0
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 2.2e-31 139.0 110 60.9
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 5.1e-28 127.9 103 62.1
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 1.6e-26 122.9 82 67.1
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 2.8e-26 122.1 87 64.4
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 3.6e-26 121.7 112 52.7
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 4.7e-26 121.3 101 56.4
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.4e-25 119.8 110 53.6
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 1.4e-25 119.8 105 53.3
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 1.8e-25 119.4 100 54.0
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.9e-25 117.1 84 58.3
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 1.2e-24 116.7 89 61.8
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 1.5e-24 116.3 112 48.2
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 2.0e-24 115.9 108 53.7
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 4.4e-24 114.8 104 51.0
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 5.8e-24 114.4 103 49.5
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 5.8e-24 114.4 91 56.0
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 9.9e-24 113.6 104 50.0
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 2.9e-23 112.1 102 52.0
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 4.9e-23 111.3 105 48.6
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.9e-23 111.3 92 52.2
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 6.4e-23 110.9 104 51.0
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.4e-23 110.5 113 45.1
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.1e-22 110.2 102 48.0
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.9e-22 109.4 104 50.0
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 1.9e-22 109.4 110 50.0
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.9e-22 109.4 84 53.6
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.4e-22 109.0 108 47.2
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 2.4e-22 109.0 105 50.5
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 3.2e-22 108.6 104 51.0
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 5.4e-22 107.8 104 46.2
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 5.4e-22 107.8 98 46.9
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 9.3e-22 107.1 106 47.2
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 9.3e-22 107.1 113 45.1
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 9.3e-22 107.1 103 49.5
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 9.3e-22 107.1 80 58.8
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 9.3e-22 107.1 112 46.4
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 9.3e-22 107.1 104 45.2
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 9.3e-22 107.1 111 50.5
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.2e-21 106.7 106 46.2
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 1.2e-21 106.7 112 43.8
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 1.2e-21 106.7 112 45.5
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.2e-21 106.7 104 51.0
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 1.2e-21 106.7 104 45.2
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.6e-21 106.3 82 51.2
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 2.1e-21 105.9 108 42.6
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 2.1e-21 105.9 106 46.2
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 2.7e-21 105.5 108 50.0
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 2.7e-21 105.5 114 47.4
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 2.7e-21 105.5 114 44.7
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.7e-21 105.5 114 43.0
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 3.5e-21 105.1 112 46.4
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 3.5e-21 105.1 109 49.5
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 4.6e-21 104.8 96 49.0
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 6.0e-21 104.4 82 50.0
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 6.0e-21 104.4 104 48.1
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 6.0e-21 104.4 111 49.5
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 7.8e-21 104.0 107 47.7
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.0e-20 103.6 99 49.5
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.0e-20 103.6 100 50.0
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.0e-20 103.6 102 47.1
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.0e-20 103.6 111 48.6
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.0e-20 103.6 106 42.5
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 1.3e-20 103.2 107 48.6
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.3e-20 103.2 104 49.0
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.3e-20 103.2 114 36.8
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.7e-20 102.8 102 46.1
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 1.7e-20 102.8 108 43.5
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 1.7e-20 102.8 104 41.3
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.7e-20 102.8 113 45.1
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 2.3e-20 102.4 98 46.9
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 2.3e-20 102.4 82 52.4
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 2.3e-20 102.4 110 41.8
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 2.3e-20 102.4 96 42.7
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 2.3e-20 102.4 101 48.5
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 3.9e-20 101.7 103 47.6
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 3.9e-20 101.7 99 42.4
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 5.1e-20 101.3 103 43.7
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 5.1e-20 101.3 101 46.5
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 6.6e-20 100.9 80 55.0
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 8.7e-20 100.5 111 44.1
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 8.7e-20 100.5 114 44.7
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.7e-20 100.5 98 45.9
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.7e-20 100.5 98 45.9
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 1.1e-19 100.1 112 44.6
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 1.5e-19 99.8 91 51.6
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 1.5e-19 99.8 112 48.2
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 1.5e-19 99.8 105 43.8
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 1.9e-19 99.4 112 43.8
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 1.9e-19 99.4 99 47.5
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 1.9e-19 99.4 107 43.0
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.5e-19 99.0 112 42.9
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 2.5e-19 99.0 109 43.1
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 3.3e-19 98.6 80 52.5
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 3.3e-19 98.6 83 50.6
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 3.3e-19 98.6 112 43.8
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 4.3e-19 98.2 112 43.8
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 4.3e-19 98.2 85 48.2
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 5.6e-19 97.8 105 46.7
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.3e-19 97.4 113 39.8
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 9.6e-19 97.1 113 41.6
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 1.3e-18 96.7 98 40.8
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.3e-18 96.7 80 50.0
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 2.1e-18 95.9 98 38.8
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.1e-18 95.9 112 43.8
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 2.8e-18 95.5 112 42.9
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 3.6e-18 95.1 108 41.7
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 4.8e-18 94.7 106 40.6
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 4.8e-18 94.7 108 43.5
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 4.8e-18 94.7 113 38.9
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 8.1e-18 94.0 118 39.0
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.4e-17 93.2 75 50.7
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 1.8e-17 92.8 105 42.9
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 4.0e-17 91.7 80 50.0
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.0e-17 91.7 114 43.9
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 6.9e-17 90.9 107 41.1
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 9.0e-17 90.5 87 46.0
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.2e-16 90.1 102 43.1
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 1.2e-16 90.1 114 36.8
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.2e-16 90.1 95 45.3
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 2.6e-16 89.0 109 42.2
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 3.4e-16 88.6 100 44.0
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 4.5e-16 88.2 97 41.2
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 4.5e-16 88.2 109 42.2
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 4.5e-16 88.2 111 36.0
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 5.8e-16 87.8 82 46.3
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 7.6e-16 87.4 115 39.1
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 9.9e-16 87.0 104 41.3
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 9.9e-16 87.0 105 41.9
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 1.7e-15 86.3 112 37.5
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 2.2e-15 85.9 94 42.6
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 3.8e-15 85.1 102 40.2
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 4.9e-15 84.7 119 41.2
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 4.9e-15 84.7 107 40.2
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 1.9e-14 82.8 98 42.9
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 2.4e-14 82.4 105 38.1
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 1.2e-13 80.1 103 37.9
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.2e-13 80.1 103 39.8
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 1.6e-13 79.7 106 38.7
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 7.9e-13 77.4 99 36.4
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.5e-11 73.2 109 33.0
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.5e-11 72.4 108 35.2
CAN.G572.18 Capsicum annuum HOM05D004409 ORTHO05D005292 3.3e-11 72.0 98 37.8
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 2.1e-10 69.3 104 32.7
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 3.6e-10 68.6 113 33.6
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 4.0e-09 65.1 57 45.6
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 5.3e-09 64.7 101 30.7
SMO134G0054 Selaginella moellendorffii HOM05D004409 ORTHO05D005292 4.5e-08 61.6 90 33.3
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 4.9e-07 58.2 104 31.7
Dinv34529 Davidia involucrata HOM05D004409 ORTHO05D005292 8.4e-07 57.4 42 57.1
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 1.4e-06 56.6 101 28.7
SMO111G0095 Selaginella moellendorffii HOM05D004409 ORTHO05D005292 1.4e-06 56.6 99 28.3
Aqoxy2G00284 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 3.2e-06 55.5 103 32.0


User provided reference genes

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