Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 1.7e-169 599.4 323 100.0
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 1.6e-79 300.4 328 57.6
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 1.2e-74 284.3 331 53.8
MSTRG.14400 Avicennia marina HOM05D003841 ORTHO05D004602 4.3e-72 275.8 360 50.8
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 7.0e-67 258.5 331 52.0
SalBow7G4379 Salvia bowleyana HOM05D003841 ORTHO05D004602 6.6e-65 251.9 331 51.7
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 3.5e-58 229.6 340 48.2
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 6.2e-55 218.8 332 47.3
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 2.4e-54 216.9 338 44.4
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 2.4e-54 216.9 326 47.5
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 3.1e-54 216.5 333 44.1
unitig_899.g15555 Utricularia gibba HOM05D003841 ORTHO05D004602 1.2e-53 214.5 329 45.9
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 3.4e-53 213.0 349 43.6
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 3.8e-52 209.5 339 46.3
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 1.2e-50 204.5 335 45.4
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 6.0e-50 202.2 329 43.5
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 1.9e-48 197.2 327 46.2
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 4.7e-47 192.6 329 43.5
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 1.8e-46 190.7 326 43.6
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 1.8e-46 190.7 338 42.0
SGA_v2.0_scaffold70G23570 Striga asiatica HOM05D003841 ORTHO05D004602 4.0e-46 189.5 326 41.7
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 1.5e-45 187.6 295 45.4
unitig_746.g26819 Utricularia gibba HOM05D003841 ORTHO05D004602 2.0e-45 187.2 292 45.9
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.1e-43 181.4 336 41.7
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 1.9e-43 180.6 332 41.9
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 4.2e-43 179.5 341 42.8
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 4.2e-43 179.5 369 39.3
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 7.1e-43 178.7 340 43.2
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 9.3e-43 178.3 320 42.5
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 2.1e-42 177.2 330 40.3
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 2.7e-42 176.8 319 42.9
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 3.5e-42 176.4 331 40.2
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 5.6e-40 169.1 349 39.0
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 2.8e-39 166.8 332 38.6
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.2e-37 161.4 327 40.4
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 1.2e-37 161.4 345 35.7
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 7.6e-37 158.7 342 38.3
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 9.9e-37 158.3 329 37.7
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 2.2e-36 157.1 325 37.8
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 2.2e-36 157.1 330 37.6
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 2.2e-36 157.1 340 36.5
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 3.8e-36 156.4 349 37.2
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 4.9e-36 156.0 279 43.0
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 4.9e-36 156.0 340 36.8
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 6.4e-36 155.6 349 36.7
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.4e-35 154.5 333 35.7
Hund23360 Selenicereus undatus HOM05D003841 ORTHO05D004602 2.4e-35 153.7 324 38.6
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 4.2e-35 152.9 472 32.2
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 7.1e-35 152.1 328 38.4
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 7.1e-35 152.1 339 37.8
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 1.2e-34 151.4 327 38.8
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.6e-34 151.0 332 36.7
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 4.6e-34 149.4 343 35.6
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 6.0e-34 149.1 325 39.1
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 7.9e-34 148.7 344 34.9
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 1.0e-33 148.3 333 36.3
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 1.3e-33 147.9 334 35.0
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 1.8e-33 147.5 327 37.6
Psat7g160280 Pisum sativum HOM05D003841 ORTHO05D004602 1.8e-33 147.5 332 37.0
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 3.0e-33 146.7 333 36.9
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 3.9e-33 146.4 338 34.3
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 8.7e-33 145.2 336 36.3
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 1.5e-32 144.4 335 36.7
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.9e-32 144.1 353 37.1
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.9e-32 144.1 341 36.7
Medtr4g081550 Medicago truncatula HOM05D003841 ORTHO05D004602 1.9e-32 144.1 326 36.8
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 2.5e-32 143.7 343 35.3
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 3.3e-32 143.3 322 36.6
TPR.G34029 Trifolium pratense HOM05D003841 ORTHO05D004602 9.6e-32 141.7 334 36.2
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 2.1e-31 140.6 339 35.7
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 2.8e-31 140.2 350 34.6
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 4.8e-31 139.4 330 36.7
MELO3C018156.2 Cucumis melo HOM05D003841 ORTHO05D004602 6.2e-31 139.0 330 38.2
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 8.1e-31 138.7 339 35.4
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 1.1e-30 138.3 340 36.5
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 1.4e-30 137.9 211 44.5
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 2.4e-30 137.1 337 35.3
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 4.0e-30 136.3 332 35.2
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 5.3e-30 136.0 327 35.2
CARHR267820 Cardamine hirsuta HOM05D003841 ORTHO05D004602 6.9e-30 135.6 332 38.3
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 6.9e-30 135.6 332 35.2
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 6.9e-30 135.6 336 33.0
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 6.9e-30 135.6 342 34.8
Sed0013156 Sechium edule HOM05D003841 ORTHO05D004602 6.9e-30 135.6 345 37.7
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 9.0e-30 135.2 331 37.5
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.2e-29 134.8 334 34.7
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 1.5e-29 134.4 341 34.6
Ca_18832_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 2.0e-29 134.0 334 35.9
Ca_30091_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 2.0e-29 134.0 334 35.9
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 2.6e-29 133.7 332 34.9
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.4e-29 133.3 340 35.6
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.3e-28 131.3 334 34.7
CsaV3_3G022650 Cucumis sativus L. HOM05D003841 ORTHO05D004602 2.9e-28 130.2 346 35.3
Phvul.011G146700 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 2.9e-28 130.2 332 35.5
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 2.9e-28 130.2 331 36.9
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 6.4e-28 129.0 326 35.3
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 1.4e-27 127.9 350 33.4
Glyma.06G262900 Glycine max HOM05D003841 ORTHO05D004602 3.2e-27 126.7 336 32.7
VMungo1127G0850 Vigna mungo HOM05D003841 ORTHO05D004602 3.2e-27 126.7 330 35.5
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 5.5e-27 125.9 329 34.7
AL8G29910 Arabidopsis lyrata HOM05D003841 ORTHO05D004602 7.1e-27 125.6 331 36.3
Carub.0008s1482 Capsella rubella HOM05D003841 ORTHO05D004602 1.6e-26 124.4 339 34.5
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 1.6e-26 124.4 287 37.6
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 2.1e-26 124.0 331 34.4
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 2.7e-26 123.6 341 33.4
PSO675G0068 Papaver somniferum HOM05D003841 ORTHO05D004602 6.0e-26 122.5 311 34.1
AT5G54540 Arabidopsis thaliana HOM05D003841 ORTHO05D004602 1.3e-25 121.3 331 35.3
TAR623G1765 Trochodendron aralioides HOM05D003841 ORTHO05D004602 2.3e-25 120.6 342 32.7
Hund02157 Selenicereus undatus HOM05D003841 ORTHO05D004602 6.7e-25 119.0 325 33.5
Aqoxy1G03844 Aquilegia oxysepala HOM05D003841 ORTHO05D004602 1.5e-24 117.9 343 31.2
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 1.5e-24 117.9 339 35.1
Oeu052339.1 Olea europaea HOM05D003841 ORTHO05D004602 1.9e-24 117.5 206 42.7
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 4.3e-24 116.3 333 33.6
MBI18_g38396_MAGBIO Magnolia biondii HOM05D003841 ORTHO05D004602 5.6e-24 115.9 334 33.8
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 1.6e-23 114.4 333 32.4
A10p11770 Brassica napus HOM05D003841 ORTHO05D004602 2.8e-23 113.6 338 33.4
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 3.7e-23 113.2 233 36.5
Glyma.12G139800 Glycine max HOM05D003841 ORTHO05D004602 8.2e-23 112.1 345 31.3
Sp6g16510 Schrenkiella parvula HOM05D003841 ORTHO05D004602 8.2e-23 112.1 337 34.4
BraA10t43276Z Brassica rapa HOM05D003841 ORTHO05D004602 2.4e-22 110.5 337 32.9
PSO541G5517 Papaver somniferum HOM05D003841 ORTHO05D004602 2.4e-22 110.5 234 35.5
CDE05G3666 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 4.0e-22 109.8 327 33.0
Thhalv10014255m.g Eutrema salsugineum HOM05D003841 ORTHO05D004602 5.3e-22 109.4 336 33.6
Sabra11G0117400 Salix brachista HOM05D003841 ORTHO05D004602 3.4e-21 106.7 277 36.5
BcaB08g35813 Brassica carinata HOM05D003841 ORTHO05D004602 7.6e-21 105.5 337 32.9
A02p10210 Brassica napus HOM05D003841 ORTHO05D004602 7.6e-21 105.5 334 32.0
Oeu052334.1 Olea europaea HOM05D003841 ORTHO05D004602 1.7e-20 104.4 244 34.0
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea HOM05D003841 ORTHO05D004602 2.2e-20 104.0 335 32.8
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 3.8e-20 103.2 223 36.8
BcaC04g20329 Brassica carinata HOM05D003841 ORTHO05D004602 4.9e-20 102.8 337 31.8
ATR0804G047 Amborella trichopoda HOM05D003841 ORTHO05D004602 1.1e-19 101.7 347 30.5
C02p16910 Brassica napus HOM05D003841 ORTHO05D004602 1.4e-19 101.3 328 31.4
Zm00001eb171810 Zea mays HOM05D003841 ORTHO05D004602 1.9e-19 100.9 346 31.2
C09p44880 Brassica napus HOM05D003841 ORTHO05D004602 2.5e-19 100.5 338 31.4
Os08g0179900 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D004602 2.5e-19 100.5 281 32.4
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea HOM05D003841 ORTHO05D004602 5.5e-19 99.4 341 33.1
BolC9t57359H Brassica oleracea HOM05D003841 ORTHO05D004602 5.5e-19 99.4 340 30.9
CDE05G3612 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 7.1e-19 99.0 333 28.2
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 9.3e-19 98.6 127 46.5
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 2.1e-18 97.4 179 41.3
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 2.1e-18 97.4 341 31.1
Cpa.g.sc80.126 Carica papaya HOM05D003841 ORTHO05D004602 5.1e-17 92.8 185 41.6
Oeu052338.1 Olea europaea HOM05D003841 ORTHO05D004602 6.7e-17 92.4 323 30.3
BraA02t06092Z Brassica rapa HOM05D003841 ORTHO05D004602 1.9e-16 90.9 330 30.3
Gohir.A11G281650 Gossypium hirsutum HOM05D003841 ORTHO05D004602 5.7e-16 89.4 257 32.7
Gohir.D11G294233 Gossypium hirsutum HOM05D003841 ORTHO05D004602 9.7e-16 88.6 378 29.6
HPP92_005894 Vanilla planifolia HOM05D003841 ORTHO05D004602 1.1e-14 85.1 325 29.2
Gorai.007G317300 Gossypium raimondii HOM05D003841 ORTHO05D004602 1.8e-14 84.3 279 31.9
MELO3C016604.2 Cucumis melo HOM05D003841 ORTHO05D004602 1.2e-13 81.6 287 27.5
ClCG10G006140 Citrullus lanatus HOM05D003841 ORTHO05D004602 2.0e-13 80.9 317 29.3
CAN.G952.3 Capsicum annuum HOM05D003841 ORTHO05D004602 2.2e-12 77.4 198 36.9
Sed0016497 Sechium edule HOM05D003841 ORTHO05D004602 5.0e-12 76.3 135 38.5
BcaB05g22143 Brassica carinata HOM05D003841 ORTHO05D004602 1.1e-11 75.1 234 29.1
Os03g0201000 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D049799 1.1e-11 75.1 380 29.2
PSO384G0968 Papaver somniferum HOM05D003841 ORTHO05D004602 1.4e-11 74.7 350 28.0
Ah.04g165190 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.6e-10 71.2 51 66.7
Sed0013484 Sechium edule HOM05D003841 ORTHO05D004602 1.6e-10 71.2 288 27.4
Cfa021072 Carpinus fangiana HOM05D003841 ORTHO05D004602 4.6e-10 69.7 123 48.0
PSO339G6399 Papaver somniferum HOM05D003841 ORTHO05D004602 6.1e-10 69.3 352 28.1
CsaV3_3G005690 Cucumis sativus L. HOM05D003841 ORTHO05D004602 1.8e-09 67.8 282 26.2
Cpa.g.c47761 Carica papaya HOM05D003841 ORTHO05D004602 3.9e-09 66.6 136 41.2
CAN.G22.51 Capsicum annuum HOM05D000121 ORTHO05D000102 8.8e-09 65.5 114 39.5
PGR031G0981 Punica granatum HOM05D003841 ORTHO05D004602 4.3e-08 63.2 154 30.5
SEGI_16254 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 4.3e-08 63.2 304 26.0
VMungo1027G0001 Vigna mungo HOM05D003841 ORTHO05D004602 6.3e-07 59.3 213 29.6
Phvul.005G089400 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 6.9e-06 55.8 69 43.5
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 9.1e-06 55.5 128 38.3


User provided reference genes

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