Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 4.7e-115 417.9 218 100.0
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 1.7e-72 276.6 218 69.7
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 8.4e-72 274.2 221 70.6
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 8.4e-72 274.2 221 70.6
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 3.5e-70 268.9 221 67.4
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 1.3e-69 266.9 227 68.7
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.3e-67 260.4 227 67.4
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 2.1e-67 259.6 227 67.4
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 1.1e-66 257.3 232 64.7
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.4e-66 256.1 225 67.6
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 6.9e-66 254.6 191 71.2
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 1.2e-65 253.8 174 75.9
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 1.2e-65 253.8 191 71.2
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 7.6e-65 251.1 181 74.6
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 1.3e-64 250.4 187 71.7
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 1.7e-64 250.0 179 77.7
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 2.2e-64 249.6 230 64.3
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.2e-64 249.6 202 68.3
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.9e-64 248.4 173 78.6
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 4.9e-64 248.4 202 68.3
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 6.4e-64 248.1 224 65.6
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 6.4e-64 248.1 173 78.6
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.1e-63 247.3 223 66.4
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 1.4e-63 246.9 202 67.8
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.9e-63 246.5 223 65.9
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 2.4e-63 246.1 209 67.9
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.4e-63 246.1 209 67.9
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 2.4e-63 246.1 176 75.0
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 3.2e-63 245.7 203 67.0
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 4.2e-63 245.4 181 73.5
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 5.4e-63 245.0 221 66.1
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 2.1e-62 243.0 183 73.2
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 2.7e-62 242.7 219 64.4
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 3.5e-62 242.3 224 64.3
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 3.5e-62 242.3 222 65.8
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 6.0e-62 241.5 219 64.8
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 6.0e-62 241.5 220 66.4
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 2.3e-61 239.6 213 62.9
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 3.0e-61 239.2 210 64.8
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 5.1e-61 238.4 200 66.5
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 5.1e-61 238.4 224 66.1
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 6.7e-61 238.0 217 63.1
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 6.7e-61 238.0 177 70.6
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 1.5e-60 236.9 225 63.1
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 1.5e-60 236.9 225 63.1
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 1.5e-60 236.9 225 63.1
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 4.3e-60 235.3 179 74.9
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 4.3e-60 235.3 217 62.2
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 7.4e-60 234.6 212 62.3
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 7.4e-60 234.6 182 72.0
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 7.4e-60 234.6 214 63.6
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 9.6e-60 234.2 214 65.9
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 9.6e-60 234.2 190 70.5
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 1.3e-59 233.8 153 82.4
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 2.1e-59 233.0 212 64.6
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 2.1e-59 233.0 184 72.8
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 2.1e-59 233.0 214 65.0
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 2.8e-59 232.6 186 72.0
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 2.8e-59 232.6 220 61.8
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 4.8e-59 231.9 162 77.2
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 4.8e-59 231.9 202 67.3
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 6.2e-59 231.5 224 61.2
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 6.2e-59 231.5 230 61.3
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 1.1e-58 230.7 228 62.3
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 1.1e-58 230.7 230 61.3
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 1.4e-58 230.3 212 63.7
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.4e-58 230.3 229 60.3
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 1.5e-57 226.9 221 60.6
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.5e-57 226.9 200 66.0
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 2.6e-57 226.1 149 81.2
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 2.6e-57 226.1 193 65.8
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 4.5e-57 225.3 165 73.3
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 9.9e-57 224.2 147 81.6
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 1.7e-56 223.4 180 70.0
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 6.4e-56 221.5 225 59.6
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 1.9e-55 219.9 180 70.6
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 9.3e-55 217.6 178 68.5
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 1.6e-54 216.9 225 61.3
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 2.7e-54 216.1 197 64.0
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 2.7e-54 216.1 225 60.4
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 6.0e-54 214.9 173 71.1
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 7.9e-54 214.5 176 67.0
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 1.8e-53 213.4 191 64.4
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 1.8e-53 213.4 179 67.0
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 5.1e-53 211.8 228 57.0
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 5.6e-52 208.4 200 60.0
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 4.5e-49 198.7 183 62.3
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 8.7e-45 184.5 165 61.8
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 1.4e-42 177.2 231 54.1
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.8e-42 176.8 186 56.5
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 3.8e-40 169.1 133 69.9
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 1.6e-38 163.7 178 53.4
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 2.7e-38 162.9 166 57.8
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 6.1e-38 161.8 119 72.3
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 3.9e-37 159.1 106 76.4
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 1.1e-36 157.5 107 80.4
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 6.9e-26 121.7 82 80.5
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 4.5e-25 119.0 82 79.3
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 1.7e-24 117.1 139 54.0
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 1.6e-22 110.5 176 38.6
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 2.7e-22 109.8 74 78.4
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 6.1e-22 108.6 92 64.1
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.5e-20 104.0 79 69.6
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 2.8e-19 99.8 102 60.8
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 1.1e-15 87.8 58 77.6
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 8.0e-14 81.6 112 39.3
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 1.3e-11 74.3 111 43.2
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 4.1e-10 69.3 46 80.4
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.1e-10 69.3 46 80.4
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 1.2e-09 67.8 103 37.9
AagrBONN_evm.TU.Sc2ySwM_117.1655 Anthoceros agrestis HOM05D007184 ORTHO05D008987 5.5e-07 58.9 89 40.4
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.1e-06 57.0 35 82.9
Sc03g0008980 Simmondsia chinensis HOM05D007184 ORTHO05D008987 2.7e-06 56.6 43 65.1


User provided reference genes

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