Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 6.5e-94 347.4 183 100.0
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 2.7e-31 139.4 184 50.5
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 6.7e-30 134.8 203 47.3
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.7e-28 129.0 202 44.1
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.4e-27 126.3 215 45.6
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 2.0e-26 123.2 208 42.3
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 5.8e-26 121.7 188 47.3
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 5.8e-26 121.7 190 47.9
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 5.8e-26 121.7 191 48.7
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 9.9e-26 120.9 201 43.8
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 9.9e-26 120.9 183 47.5
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 9.9e-26 120.9 197 43.7
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 1.7e-25 120.2 205 44.4
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 2.9e-25 119.4 189 48.7
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 6.4e-25 118.2 187 46.0
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.1e-24 117.5 202 45.5
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 1.4e-24 117.1 200 45.5
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 2.4e-24 116.3 169 47.3
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 5.5e-24 115.2 231 40.3
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 7.1e-24 114.8 213 42.7
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 9.3e-24 114.4 182 44.0
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.2e-23 114.0 200 46.0
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.1e-23 113.2 169 48.5
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 3.5e-23 112.5 211 42.2
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 6.0e-23 111.7 181 43.1
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 6.0e-23 111.7 186 44.1
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 7.9e-23 111.3 223 40.8
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 7.9e-23 111.3 188 44.1
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 7.9e-23 111.3 191 42.9
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 1.0e-22 110.9 210 40.5
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 1.3e-22 110.5 175 42.9
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 1.3e-22 110.5 202 41.1
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 1.8e-22 110.2 203 41.4
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 3.0e-22 109.4 205 38.0
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.1e-22 108.6 209 39.7
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.1e-22 108.6 209 39.7
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 5.1e-22 108.6 166 47.0
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 6.7e-22 108.2 213 39.9
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 8.7e-22 107.8 197 40.6
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.1e-21 107.5 214 39.3
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-21 106.7 219 37.9
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.5e-21 106.3 211 42.2
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.3e-21 105.9 219 37.4
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 3.3e-21 105.9 173 43.9
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 9.6e-21 104.4 219 37.0
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.3e-20 104.0 177 41.8
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.1e-20 103.2 197 41.1
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.1e-19 100.9 211 38.4
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.1e-19 100.9 236 36.0
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 1.4e-19 100.5 196 41.3
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.4e-19 100.5 202 39.1
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.8e-19 100.1 184 40.8
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.8e-19 100.1 216 38.4
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.8e-19 100.1 201 38.8
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.8e-19 100.1 189 43.4
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 4.0e-19 99.0 217 37.3
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 4.0e-19 99.0 179 41.9
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.0e-19 99.0 177 45.2
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 6.9e-19 98.2 188 40.4
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 9.0e-19 97.8 199 40.7
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.5e-18 97.1 180 40.6
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 2.6e-18 96.3 224 36.2
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.4e-18 95.9 179 38.5
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 5.8e-18 95.1 194 42.3
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 7.6e-18 94.7 186 39.8
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 2.2e-17 93.2 181 40.3
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 2.9e-17 92.8 184 38.6
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 2.9e-17 92.8 188 39.4
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 3.8e-17 92.4 209 38.3
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 8.4e-17 91.3 181 38.7
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.4e-16 90.5 155 41.3
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 3.2e-16 89.4 154 44.8
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 4.2e-16 89.0 211 37.0
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.2e-15 87.4 193 36.3
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 2.7e-15 86.3 193 41.5
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 3.5e-15 85.9 193 36.3
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 6.0e-15 85.1 181 38.1
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 6.7e-14 81.6 88 54.5
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 6.7e-14 81.6 177 40.7
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 8.7e-14 81.3 232 34.9
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.5e-13 80.5 177 40.1
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 4.3e-13 79.0 167 36.5
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 5.7e-13 78.6 136 37.5
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 7.4e-13 78.2 143 42.7
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 2.8e-12 76.3 167 35.9
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 2.8e-12 76.3 206 31.6
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 3.7e-12 75.9 170 35.9
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 6.3e-12 75.1 138 34.1
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.0e-10 70.1 182 34.1
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.0e-09 67.8 161 38.5
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.9e-09 66.2 147 34.0
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 2.5e-08 63.2 170 35.3
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.6e-07 60.5 138 34.8
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 7.9e-07 58.2 32 87.5
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 1.8e-06 57.0 139 34.5


User provided reference genes

Program Settings