Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 3.7e-114 414.8 205 100.0
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 6.0e-96 354.4 205 84.4
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 3.5e-88 328.6 205 77.6
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 1.1e-86 323.6 203 74.4
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.1e-86 323.6 204 76.5
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 4.3e-86 321.6 207 76.3
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 1.1e-84 317.0 203 74.9
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 3.1e-84 315.5 204 73.5
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 4.0e-84 315.1 203 74.4
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 5.3e-84 314.7 204 73.0
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 4.5e-83 311.6 203 73.4
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 5.8e-83 311.2 201 74.6
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 7.6e-83 310.8 197 76.1
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 1.3e-82 310.1 204 75.5
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 2.9e-82 308.9 203 75.4
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 2.9e-82 308.9 203 75.4
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 3.8e-82 308.5 203 74.9
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 4.9e-82 308.1 202 72.8
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.4e-81 306.6 203 71.9
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.9e-81 306.2 197 76.1
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 4.2e-81 305.1 205 72.2
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 5.4e-81 304.7 203 72.4
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.6e-80 303.1 201 75.1
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.3e-79 300.1 203 70.0
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 2.3e-79 299.3 203 70.9
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 3.0e-79 298.9 203 72.9
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 6.7e-79 297.7 199 74.4
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 6.7e-79 297.7 203 70.9
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 8.7e-79 297.4 192 72.9
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.1e-78 297.0 206 70.9
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 1.9e-78 296.2 205 70.2
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 1.9e-78 296.2 210 71.0
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 2.5e-78 295.8 201 72.1
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 3.3e-78 295.4 200 72.0
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.6e-78 294.7 203 68.5
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 5.6e-78 294.7 205 70.7
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 5.6e-78 294.7 201 70.1
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 9.6e-78 293.9 203 68.5
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 4.8e-77 291.6 220 67.7
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 6.2e-77 291.2 223 65.5
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 6.2e-77 291.2 201 68.7
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.1e-76 290.4 192 74.0
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 1.8e-76 289.7 203 68.5
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 2.4e-76 289.3 201 68.7
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 3.1e-76 288.9 201 67.2
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 5.3e-76 288.1 201 68.7
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.9e-76 287.7 220 64.1
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 6.9e-76 287.7 201 68.7
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 1.2e-75 287.0 201 69.2
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 1.2e-75 287.0 201 70.1
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 2.6e-75 285.8 202 68.8
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 5.8e-75 284.6 197 68.0
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 4.9e-74 281.6 201 67.7
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 6.4e-74 281.2 218 66.1
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 1.9e-73 279.6 201 67.7
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 9.3e-73 277.3 201 66.7
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 1.2e-72 276.9 204 64.2
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 1.6e-72 276.6 201 64.2
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 7.9e-72 274.2 201 63.7
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 7.9e-72 274.2 204 62.7
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 1.3e-71 273.5 175 73.7
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 3.9e-71 271.9 198 64.6
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 8.7e-71 270.8 203 64.0
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.5e-70 270.0 204 62.7
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 9.6e-70 267.3 191 66.0
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 3.7e-69 265.4 232 58.6
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 3.1e-68 262.3 194 64.9
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 4.0e-68 261.9 189 66.1
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 5.3e-68 261.5 193 64.8
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 5.3e-68 261.5 189 67.2
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 9.0e-68 260.8 197 61.9
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 4.5e-67 258.5 180 68.9
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 2.9e-66 255.8 199 62.8
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 3.8e-66 255.4 166 74.1
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 1.6e-64 250.0 204 59.3
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 3.0e-63 245.7 191 63.9
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 3.9e-63 245.4 191 64.4
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 7.4e-62 241.1 204 60.8
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 2.4e-60 236.1 192 59.9
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 9.0e-60 234.2 158 69.6
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 3.4e-59 232.3 203 56.2
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 2.3e-55 219.5 153 68.6
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.5e-54 216.9 157 66.2
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 3.3e-54 215.7 190 56.8
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.1e-46 190.7 139 66.2
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 7.4e-46 188.0 139 66.2
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 9.7e-46 187.6 147 65.3
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 2.2e-45 186.4 203 48.8
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.1e-44 184.1 127 69.3
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.1e-44 184.1 127 69.3
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 3.1e-44 182.6 199 44.7
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 5.9e-43 178.3 128 68.0
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 5.2e-39 165.2 168 51.2
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 1.5e-38 163.7 186 42.5
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 2.6e-38 162.9 163 52.8
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.8e-34 149.1 195 39.5
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 7.2e-33 144.8 193 38.3
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 1.2e-32 144.1 127 52.8
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.4e-28 130.6 180 41.7
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 1.8e-28 130.2 127 48.8
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 7.7e-27 124.8 108 59.3
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 6.1e-24 115.2 84 64.3
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.1e-24 115.2 65 75.4
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 8.0e-24 114.8 91 63.7
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 1.2e-19 100.9 83 63.9
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.6e-19 100.5 73 64.4
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 2.9e-18 96.3 187 34.2
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 5.0e-18 95.5 157 39.5
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 5.0e-18 95.5 62 66.1
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 7.5e-14 81.6 64 60.9
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.7e-13 80.5 108 45.4
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 5.9e-11 72.0 160 34.4
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 5.0e-10 68.9 44 70.5
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 1.9e-09 67.0 39 69.2
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 1.8e-07 60.5 37 70.3
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 9.8e-06 54.7 63 42.9


User provided reference genes

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