Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 2.3e-221 771.9 384 100.0
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 6.9e-178 627.5 384 82.0
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 7.9e-174 614.0 384 79.7
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 1.9e-172 609.4 381 79.3
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 1.8e-170 602.8 381 77.2
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.1e-170 602.1 382 77.2
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 6.4e-168 594.3 405 74.8
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 8.4e-168 594.0 381 76.4
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.1e-167 593.6 381 77.4
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 2.4e-167 592.4 383 76.5
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 4.2e-167 591.7 381 77.4
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 2.1e-166 589.3 381 76.1
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 1.0e-165 587.0 382 76.2
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 1.0e-165 587.0 335 84.5
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.3e-165 586.6 382 76.2
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 2.3e-165 585.9 381 76.4
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 6.7e-165 584.3 381 76.4
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.5e-164 583.2 382 75.9
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 7.4e-164 580.9 381 76.1
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 7.4e-164 580.9 382 75.9
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 3.7e-163 578.6 381 75.6
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 3.7e-163 578.6 383 76.2
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 6.2e-163 577.8 381 75.6
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 1.8e-162 576.2 384 74.5
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.8e-162 576.2 382 76.4
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 2.0e-161 572.8 318 85.5
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 2.0e-161 572.8 378 75.1
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 2.0e-161 572.8 377 73.5
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 2.6e-161 572.4 384 74.7
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 2.6e-161 572.4 381 74.0
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 3.4e-161 572.0 346 79.5
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 4.5e-161 571.6 382 75.1
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 5.8e-161 571.2 378 74.9
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 1.0e-160 570.5 383 74.2
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 1.3e-160 570.1 384 75.0
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 1.7e-160 569.7 406 70.7
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 2.9e-160 568.9 359 77.7
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 4.9e-160 568.2 382 74.1
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 6.5e-160 567.8 373 76.4
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 6.5e-160 567.8 318 83.6
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 6.5e-160 567.8 378 74.3
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 8.4e-160 567.4 382 74.6
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 1.4e-159 566.6 340 78.2
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 1.9e-159 566.2 384 74.0
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 2.7e-158 562.4 384 73.4
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 3.5e-158 562.0 371 73.6
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 3.5e-158 562.0 385 72.7
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 3.5e-158 562.0 382 72.8
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 3.5e-158 562.0 382 74.6
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 4.6e-158 561.6 381 73.2
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.8e-157 559.7 381 73.0
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 1.8e-157 559.7 381 72.2
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 8.7e-157 557.4 382 72.5
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.9e-156 556.2 377 73.5
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 2.5e-156 555.8 384 72.1
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 3.3e-156 555.4 326 81.3
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 4.3e-156 555.1 395 70.9
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 4.3e-156 555.1 381 73.0
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 5.7e-156 554.7 383 72.3
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 1.3e-155 553.5 383 72.6
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 2.1e-155 552.7 381 71.9
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 2.1e-155 552.7 388 70.9
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.8e-155 552.4 384 69.0
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 4.8e-155 551.6 378 71.4
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 1.1e-154 550.4 378 72.0
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 2.4e-154 549.3 400 70.0
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 6.9e-154 547.7 378 70.4
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.5e-153 546.6 334 77.2
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 2.0e-153 546.2 383 72.1
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 2.6e-153 545.8 365 72.1
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 5.9e-153 544.7 381 68.2
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 7.6e-153 544.3 319 80.3
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.3e-152 543.5 307 82.7
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.7e-152 543.1 383 68.1
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 2.9e-152 542.3 393 68.7
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 2.9e-152 542.3 382 69.1
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.0e-152 541.6 315 78.4
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 8.4e-152 540.8 401 69.3
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 8.4e-152 540.8 393 67.9
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 1.1e-151 540.4 361 74.0
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 4.2e-151 538.5 383 68.1
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 4.2e-151 538.5 320 78.1
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 7.2e-151 537.7 319 76.5
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-150 535.8 383 67.9
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 3.5e-150 535.4 383 67.9
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 4.6e-150 535.0 381 69.3
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 7.9e-150 534.3 381 67.7
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.0e-149 533.9 387 68.0
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.3e-149 533.5 321 76.0
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 2.3e-149 532.7 368 72.6
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 3.0e-149 532.3 317 78.5
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 3.0e-149 532.3 320 77.5
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 8.7e-149 530.8 314 76.8
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 1.5e-148 530.0 378 68.3
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 2.5e-148 529.3 386 67.9
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 2.5e-148 529.3 317 77.0
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 2.5e-148 529.3 317 77.0
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 2.5e-148 529.3 317 77.0
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 3.3e-148 528.9 317 76.7
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 3.3e-148 528.9 317 76.7
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 9.7e-148 527.3 382 71.7
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 1.3e-147 526.9 384 68.5
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 4.8e-147 525.0 322 78.0
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 1.1e-146 523.9 313 78.6
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 5.3e-146 521.5 367 68.1
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 9.0e-146 520.8 385 66.5
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 9.0e-146 520.8 381 69.3
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-145 520.4 384 66.4
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 5.9e-145 518.1 381 68.0
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 5.9e-145 518.1 377 70.3
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 2.9e-144 515.8 306 76.1
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 3.2e-143 512.3 354 72.9
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 7.2e-143 511.1 315 73.0
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 2.3e-141 506.1 388 67.8
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 3.0e-141 505.8 321 72.6
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 2.5e-140 502.7 323 70.6
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 2.4e-138 496.1 321 71.3
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 3.1e-138 495.7 353 71.4
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 2.6e-137 492.7 341 72.7
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 1.3e-136 490.3 350 72.6
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 5.0e-136 488.4 327 75.5
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 1.9e-135 486.5 382 65.4
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 3.9e-133 478.8 353 70.5
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 2.4e-130 469.5 295 72.9
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 2.4e-130 469.5 321 70.1
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 4.5e-129 465.3 358 69.6
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 2.1e-126 456.4 354 66.7
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 2.3e-125 453.0 257 80.2
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 2.3e-125 453.0 257 80.2
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 7.5e-124 448.0 296 67.6
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.1e-122 444.1 322 66.8
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 3.5e-121 439.1 241 85.5
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 1.2e-118 430.6 345 60.3
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 4.7e-118 428.7 325 61.2
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 3.7e-115 419.1 329 59.3
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 1.7e-112 410.2 328 65.9
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 1.5e-111 407.1 290 72.1
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.1e-106 391.0 318 57.9
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 7.0e-106 388.3 387 54.3
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 2.3e-104 383.3 294 61.6
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.1e-103 380.9 235 73.6
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 7.3e-103 378.3 239 77.4
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 3.1e-93 346.3 198 82.3
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 8.9e-93 344.7 196 82.1
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 7.5e-92 341.7 239 74.9
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.9e-91 339.7 235 68.5
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 5.4e-90 335.5 303 59.4
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 3.2e-74 283.1 211 69.7
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 5.4e-74 282.3 351 45.3
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 4.3e-71 272.7 344 43.6
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 1.4e-69 267.7 219 62.1
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 7.6e-68 261.9 296 48.3
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 5.4e-66 255.8 327 42.5
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 4.6e-65 252.7 326 43.3
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.4e-53 214.5 153 71.2
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 5.8e-52 209.1 123 79.7
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 7.9e-41 172.2 185 54.6
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.3e-40 171.4 350 34.3
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 6.9e-37 159.1 94 83.0
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 1.2e-36 158.3 92 83.7
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 3.4e-36 156.8 131 63.4
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 1.3e-35 154.8 92 81.5
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 2.2e-35 154.1 131 62.6
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 1.1e-34 151.8 94 78.7
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 1.9e-34 151.0 131 61.1
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 1.8e-32 144.4 97 79.4
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 1.8e-29 134.4 77 83.1
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 9.1e-29 132.1 66 90.9
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 1.0e-27 128.6 72 81.9
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 6.1e-25 119.4 329 27.4
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.0e-23 114.4 63 81.0
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 3.3e-23 113.6 92 66.3
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 4.4e-23 113.2 123 52.0
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 5.7e-23 112.8 133 48.9
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 5.5e-18 96.3 61 72.1
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 3.0e-16 90.5 51 78.4
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 2.0e-15 87.8 264 29.5
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 7.0e-13 79.3 45 80.0
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 5.9e-12 76.3 103 48.5
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 7.7e-12 75.9 41 82.9
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 7.7e-12 75.9 75 52.0
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 3.6e-09 67.0 42 71.4
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 3.6e-09 67.0 42 71.4
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 5.2e-08 63.2 33 90.9
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 1.7e-06 58.2 39 71.8


User provided reference genes

Program Settings