Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 4.4e-118 427.9 210 100.0
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 3.8e-61 238.8 192 62.0
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 3.2e-52 209.1 186 58.1
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 2.4e-47 193.0 182 55.5
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 4.0e-47 192.2 165 60.6
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 2.7e-43 179.5 174 54.6
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 1.3e-42 177.2 134 61.2
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 1.5e-41 173.7 197 48.2
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 1.3e-40 170.6 158 55.1
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 2.1e-40 169.9 187 51.3
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 6.2e-40 168.3 173 57.2
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 6.9e-39 164.9 160 51.2
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 4.5e-38 162.2 155 54.8
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 4.5e-38 162.2 155 54.8
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 7.6e-38 161.4 167 49.1
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 7.6e-38 161.4 187 45.5
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 2.2e-37 159.8 182 45.1
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 2.9e-37 159.5 153 54.2
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 4.9e-37 158.7 172 48.8
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.1e-36 157.5 165 49.1
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.1e-36 157.5 165 49.1
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 1.9e-36 156.8 155 54.2
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 3.2e-36 156.0 181 48.1
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 1.6e-35 153.7 186 48.4
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 2.1e-35 153.3 166 49.4
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 3.5e-35 152.5 153 52.9
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 6.0e-35 151.8 148 50.7
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 2.3e-34 149.8 185 43.8
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 3.0e-34 149.4 149 53.0
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 5.1e-34 148.7 165 50.3
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 6.7e-34 148.3 144 51.4
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 1.5e-33 147.1 170 44.1
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 2.5e-33 146.4 143 51.7
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 2.5e-33 146.4 188 42.6
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 2.5e-33 146.4 140 52.1
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 3.3e-33 146.0 179 47.5
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 5.7e-33 145.2 172 45.9
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 5.7e-33 145.2 168 45.2
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 5.7e-33 145.2 196 44.9
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 9.6e-33 144.4 163 46.6
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 2.1e-32 143.3 170 47.1
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 1.8e-31 140.2 181 45.9
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 2.4e-31 139.8 183 44.8
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 9.0e-31 137.9 161 46.6
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 2.0e-30 136.7 160 46.2
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 2.0e-30 136.7 171 43.3
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 2.6e-30 136.3 179 42.5
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 7.6e-30 134.8 164 45.7
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 7.6e-30 134.8 184 43.5
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 1.0e-29 134.4 159 44.0
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 1.3e-29 134.0 137 48.9
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 1.3e-29 134.0 172 45.3
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 2.2e-29 133.3 133 53.4
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 3.8e-29 132.5 179 41.9
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 5.0e-29 132.1 166 45.8
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 6.5e-29 131.7 195 41.0
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.9e-28 130.2 165 42.4
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 1.9e-28 130.2 166 44.6
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 4.2e-28 129.0 164 43.9
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 4.2e-28 129.0 167 44.3
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 5.5e-28 128.6 165 44.8
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 5.5e-28 128.6 150 41.3
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 7.1e-28 128.3 164 41.5
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 7.1e-28 128.3 163 42.3
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 9.3e-28 127.9 127 48.0
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.2e-27 127.5 163 41.7
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 1.6e-27 127.1 168 43.5
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 2.1e-27 126.7 150 46.0
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 2.1e-27 126.7 152 45.4
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 2.7e-27 126.3 154 45.5
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 3.5e-27 125.9 178 42.1
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 4.6e-27 125.6 159 42.1
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 6.1e-27 125.2 125 49.6
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 6.1e-27 125.2 106 56.6
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 7.9e-27 124.8 172 40.1
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 7.9e-27 124.8 149 42.3
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 7.9e-27 124.8 138 48.6
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 1.3e-26 124.0 156 42.9
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 1.3e-26 124.0 146 50.0
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 1.8e-26 123.6 155 45.8
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.8e-26 123.6 132 47.0
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.3e-26 123.2 132 46.2
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 2.3e-26 123.2 133 48.1
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 3.0e-26 122.9 147 45.6
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 3.9e-26 122.5 171 38.6
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 5.1e-26 122.1 150 45.3
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 6.7e-26 121.7 152 40.1
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 6.7e-26 121.7 201 39.3
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 8.7e-26 121.3 172 39.0
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 8.7e-26 121.3 164 42.1
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 8.7e-26 121.3 142 40.8
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 8.7e-26 121.3 158 43.7
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 8.7e-26 121.3 145 47.6
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 1.1e-25 120.9 132 45.5
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 1.1e-25 120.9 195 41.0
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 1.5e-25 120.6 166 42.2
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 1.5e-25 120.6 136 52.9
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 1.9e-25 120.2 138 42.8
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 1.9e-25 120.2 138 42.8
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 2.5e-25 119.8 145 46.9
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 4.3e-25 119.0 167 40.1
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 4.3e-25 119.0 132 47.0
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 4.3e-25 119.0 162 39.5
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 5.7e-25 118.6 135 47.4
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 5.7e-25 118.6 138 43.5
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 5.7e-25 118.6 135 47.4
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 5.7e-25 118.6 130 45.4
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 7.4e-25 118.2 153 45.1
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 9.7e-25 117.9 141 46.8
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 9.7e-25 117.9 141 46.8
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 9.7e-25 117.9 167 40.1
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 9.7e-25 117.9 135 46.7
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 9.7e-25 117.9 162 38.9
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 1.3e-24 117.5 135 47.4
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 1.3e-24 117.5 167 40.1
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 1.3e-24 117.5 141 46.8
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 1.3e-24 117.5 135 47.4
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.6e-24 117.1 132 43.9
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 1.6e-24 117.1 132 44.7
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 2.2e-24 116.7 133 47.4
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 2.2e-24 116.7 163 41.1
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 2.2e-24 116.7 132 44.7
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 2.8e-24 116.3 147 46.3
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 2.8e-24 116.3 150 43.3
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 3.7e-24 115.9 133 44.4
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 3.7e-24 115.9 133 44.4
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 4.8e-24 115.5 135 46.7
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 4.8e-24 115.5 159 40.3
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 8.2e-24 114.8 135 47.4
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 8.2e-24 114.8 173 40.5
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 1.1e-23 114.4 177 41.8
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 1.1e-23 114.4 161 42.9
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 1.8e-23 113.6 195 38.5
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 2.4e-23 113.2 154 37.0
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 3.1e-23 112.8 141 42.6
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 3.1e-23 112.8 164 42.1
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 4.1e-23 112.5 133 42.1
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 4.1e-23 112.5 133 42.1
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 4.1e-23 112.5 164 40.9
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 2.0e-22 110.2 150 37.3
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 2.6e-22 109.8 138 41.3
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 3.4e-22 109.4 144 38.9
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 4.5e-22 109.0 137 46.0
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 5.9e-22 108.6 132 40.9
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 7.7e-22 108.2 133 45.9
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 1.3e-21 107.5 178 37.1
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 1.3e-21 107.5 140 42.9
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 1.3e-21 107.5 140 38.6
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 1.3e-21 107.5 151 41.7
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 3.8e-21 105.9 161 37.3
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 5.0e-21 105.5 140 41.4
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 5.0e-21 105.5 174 39.7
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 5.0e-21 105.5 136 41.9
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 6.5e-21 105.1 133 44.4
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 8.5e-21 104.8 124 41.1
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.1e-20 104.4 132 40.2
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 1.4e-20 104.0 165 37.6
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 1.4e-20 104.0 165 37.6
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 1.4e-20 104.0 165 37.6
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 5.5e-20 102.1 140 41.4
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 9.4e-20 101.3 132 40.2
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 9.4e-20 101.3 132 40.2
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 1.2e-19 100.9 161 37.3
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 3.6e-19 99.4 132 40.2
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 3.6e-19 99.4 132 40.2
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 3.6e-19 99.4 132 40.2
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 1.0e-18 97.8 132 40.9
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 5.1e-18 95.5 136 37.5
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.1e-17 94.4 163 35.6
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 2.8e-16 89.7 91 47.3
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 4.8e-16 89.0 142 37.3
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 6.9e-15 85.1 106 43.4
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 9.1e-15 84.7 139 41.7
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 2.6e-14 83.2 115 38.3
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 7.7e-14 81.6 139 39.6
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 2.2e-13 80.1 140 37.1
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 2.9e-13 79.7 90 43.3
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 9.4e-12 74.7 80 50.0
Dinv34907 Davidia involucrata HOM05D003328 ORTHO05D003722 4.1e-07 59.3 116 31.9
PGSC0003DMG400001380 Solanum tuberosum HOM05D003328 ORTHO05D003722 5.3e-07 58.9 112 30.4
Solyc02g089250.4 Solanum lycopersicum HOM05D003328 ORTHO05D003722 7.0e-07 58.5 112 31.2
Cc07_g04510 Coffea canephora HOM05D003328 ORTHO05D003722 9.1e-07 58.2 115 31.3
Sopen02g034040 Solanum pennellii HOM05D003328 ORTHO05D003722 1.5e-06 57.4 112 31.2
MBI19_g00148_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 2.0e-06 57.0 147 27.2
CAN.G497.56 Capsicum annuum HOM05D003328 ORTHO05D003722 3.5e-06 56.2 112 30.4
HanXRQChr15g0489341 Helianthus annuus HOM05D003328 ORTHO05D003722 5.9e-06 55.5 128 25.0
Peaxi162Scf00020g02335 Petunia axillaris HOM05D003328 ORTHO05D003722 7.7e-06 55.1 112 30.4


User provided reference genes

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