Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 4.7e-44 180.6 82 100.0
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 2.3e-30 135.2 79 75.9
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.9e-29 132.1 77 68.8
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.3e-29 131.0 81 67.9
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 4.3e-29 131.0 82 65.9
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.3e-28 129.4 76 71.1
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 2.8e-28 128.3 77 66.2
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 3.6e-28 127.9 73 71.2
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 4.8e-28 127.5 84 61.9
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 8.1e-28 126.7 84 60.7
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 8.1e-28 126.7 76 68.4
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 1.4e-27 125.9 78 69.2
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 1.8e-27 125.6 72 66.7
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 1.8e-27 125.6 78 61.5
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 2.4e-27 125.2 77 64.9
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 4.0e-27 124.4 84 59.5
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 2.6e-26 121.7 77 63.6
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 4.5e-26 120.9 74 66.2
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 4.5e-26 120.9 74 66.2
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 5.8e-26 120.6 74 67.6
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 7.6e-26 120.2 77 62.3
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 1.7e-25 119.0 79 63.3
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 1.7e-25 119.0 74 66.2
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 2.9e-25 118.2 80 61.2
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 2.9e-25 118.2 74 63.5
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.9e-25 117.5 82 63.4
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 8.4e-25 116.7 82 61.0
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 1.1e-24 116.3 78 59.0
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 1.1e-24 116.3 78 61.5
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 7.1e-24 113.6 76 64.5
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 1.2e-23 112.8 70 62.9
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 1.6e-23 112.5 78 57.7
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 3.5e-23 111.3 81 61.7
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 4.6e-23 110.9 79 58.2
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 6.0e-23 110.5 78 61.5
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 1.3e-22 109.4 82 57.3
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.3e-22 108.6 78 59.0
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 2.3e-22 108.6 79 54.4
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 3.9e-22 107.8 74 55.4
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 6.7e-22 107.1 86 55.8
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.1e-21 106.3 78 59.0
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 5.6e-21 104.0 70 60.0
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 6.2e-20 100.5 81 55.6
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 6.2e-20 100.5 81 55.6
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.4e-19 98.6 68 58.8
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 5.3e-19 97.4 81 53.1
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 1.5e-18 95.9 76 50.0
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 2.6e-18 95.1 73 54.8
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 1.7e-17 92.4 69 52.2
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 3.8e-17 91.3 80 50.0
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 4.9e-17 90.9 72 52.8
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 4.9e-17 90.9 68 52.9
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 1.4e-16 89.4 72 52.8
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.9e-16 89.0 72 50.0
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 1.9e-16 89.0 61 60.7
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 1.9e-16 89.0 70 51.4
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 2.5e-16 88.6 74 51.4
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 4.2e-16 87.8 80 48.8
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 4.2e-16 87.8 80 48.8
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 4.2e-16 87.8 80 48.8
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 4.2e-16 87.8 76 50.0
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 5.5e-16 87.4 78 51.3
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 5.5e-16 87.4 78 51.3
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 5.5e-16 87.4 78 51.3
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 9.3e-16 86.7 72 48.6
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 9.3e-16 86.7 72 50.0
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 2.1e-15 85.5 80 47.5
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 2.1e-15 85.5 80 47.5
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 2.7e-15 85.1 69 56.5
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 4.6e-15 84.3 78 47.4
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 1.0e-14 83.2 67 50.7
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 1.0e-14 83.2 80 47.5
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 1.0e-14 83.2 80 47.5
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 9.6e-13 76.6 69 47.8
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 1.6e-12 75.9 69 47.8
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 2.1e-12 75.5 74 43.2
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 1.1e-11 73.2 69 46.4
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 1.1e-11 73.2 69 46.4
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 1.8e-11 72.4 72 43.1
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 3.4e-10 68.2 72 41.7
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 2.3e-06 55.5 41 51.2


User provided reference genes

Program Settings