Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01601 Erythranthe guttata HOM05D005388 ORTHO05D006281 2.8e-152 542.0 288 100.0
Migut.M01387 Erythranthe guttata HOM05D005388 ORTHO05D006281 2.5e-39 166.8 222 48.6
MSTRG.16020 Avicennia marina HOM05D005388 ORTHO05D006281 6.1e-38 162.2 225 45.8
GSVIVG01004448001 Vitis vinifera HOM05D005388 ORTHO05D006281 1.4e-37 161.0 219 47.0
Dinv13961 Davidia involucrata HOM05D005388 ORTHO05D006281 2.6e-36 156.8 227 43.6
Oeu044418.1 Olea europaea HOM05D005388 ORTHO05D006281 4.4e-36 156.0 228 45.2
Cc09_g05080 Coffea canephora HOM05D005388 ORTHO05D006281 3.1e-34 149.8 185 50.3
Actinidia26868 Actinidia chinensis HOM05D005388 ORTHO05D006281 7.0e-34 148.7 161 52.8
Solyc11g012100.2 Solanum lycopersicum HOM05D005388 ORTHO05D006281 1.2e-33 147.9 227 44.5
Thecc.06G231900 Theobroma cacao HOM05D005388 ORTHO05D006281 1.2e-33 147.9 223 44.4
Hma1.2p1_0660F.1_g197565 Hydrangea macrophylla HOM05D005388 ORTHO05D006281 1.6e-33 147.5 162 53.1
TAR629G3434 Trochodendron aralioides HOM05D005388 ORTHO05D006281 1.6e-33 147.5 223 43.9
Cc09_g05060 Coffea canephora HOM05D005388 ORTHO05D006281 2.0e-33 147.1 185 49.2
Sopen11g006890 Solanum pennellii HOM05D005388 ORTHO05D006281 2.7e-33 146.7 227 44.1
Atru.chr1.2476 Acer truncatum HOM05D005388 ORTHO05D006281 3.5e-33 146.4 224 45.1
TPR.G17170 Trifolium pratense HOM05D005388 ORTHO05D006281 3.5e-33 146.4 229 44.5
unitig_37.g12191 Utricularia gibba HOM05D005388 ORTHO05D006281 4.5e-33 146.0 221 41.6
arahy.Tifrunner.gnm1.ann1.506A6S Arachis hypogaea HOM05D005388 ORTHO05D006281 7.8e-33 145.2 168 51.8
arahy.Tifrunner.gnm1.ann1.UC4N4Q Arachis hypogaea HOM05D005388 ORTHO05D006281 1.0e-32 144.8 168 51.8
PGSC0003DMG400013269 Solanum tuberosum HOM05D005388 ORTHO05D006281 1.3e-32 144.4 227 44.1
Ciclev10016118m.g Citrus clementina HOM05D005388 ORTHO05D006281 1.7e-32 144.1 167 51.5
Lalb_Chr22g0358501 Lupinus albus HOM05D005388 ORTHO05D006281 1.7e-32 144.1 229 43.7
Sed0023635 Sechium edule HOM05D005388 ORTHO05D006281 1.7e-32 144.1 212 45.3
Lsat_1_v5_gn_5_121860 Lactuca sativa HOM05D005388 ORTHO05D006281 2.3e-32 143.7 164 51.2
Nitab4.5_0000143g0400 Nicotiana tabacum HOM05D005388 ORTHO05D006281 2.9e-32 143.3 219 43.4
CANSAT56G1966 Cannabis sativa HOM05D005388 ORTHO05D006281 3.8e-32 142.9 173 49.7
Gohir.A06G152900 Gossypium hirsutum HOM05D005388 ORTHO05D006281 5.0e-32 142.5 228 43.0
arahy.Tifrunner.gnm1.ann1.KLAQ17 Arachis hypogaea HOM05D005388 ORTHO05D006281 6.6e-32 142.1 135 57.0
Actinidia02320 Actinidia chinensis HOM05D005388 ORTHO05D006281 1.1e-31 141.4 171 49.7
QL03p029835 Quercus lobata HOM05D005388 ORTHO05D006281 1.5e-31 141.0 180 46.7
TAR624G0708 Trochodendron aralioides HOM05D005388 ORTHO05D006281 1.5e-31 141.0 180 47.8
Manes.03G134302 Manihot esculenta HOM05D005388 ORTHO05D006281 1.9e-31 140.6 225 42.7
arahy.Tifrunner.gnm1.ann1.NIL5QZ Arachis hypogaea HOM05D005388 ORTHO05D006281 2.5e-31 140.2 181 48.6
Gohir.D06G159300 Gossypium hirsutum HOM05D005388 ORTHO05D006281 3.3e-31 139.8 228 42.5
Lj1g0004963 Lotus japonicus HOM05D005388 ORTHO05D006281 3.3e-31 139.8 163 51.5
Nn1g07342 Nelumbo nucifera HOM05D005388 ORTHO05D006281 5.6e-31 139.0 168 52.4
Nitab4.5_0001198g0130 Nicotiana tabacum HOM05D005388 ORTHO05D006281 5.6e-31 139.0 230 42.2
Prupe.4G012000 Prunus persica HOM05D005388 ORTHO05D006281 5.6e-31 139.0 181 49.7
QL10p003604 Quercus lobata HOM05D005388 ORTHO05D006281 5.6e-31 139.0 222 41.0
MSTRG.14615 Avicennia marina HOM05D005388 ORTHO05D006281 9.5e-31 138.3 148 55.4
Gorai.010G186000 Gossypium raimondii HOM05D005388 ORTHO05D006281 1.2e-30 137.9 182 48.9
RcHm_v2.0_Chr7g0213451 Rosa chinensis HOM05D005388 ORTHO05D006281 1.2e-30 137.9 227 39.6
VMungo1383G1280 Vigna mungo HOM05D005388 ORTHO05D006281 1.2e-30 137.9 163 50.9
HanXRQChr12g0373991 Helianthus annuus HOM05D005388 ORTHO05D006281 1.6e-30 137.5 180 47.2
HanXRQChr12g0374001 Helianthus annuus HOM05D005388 ORTHO05D006281 1.6e-30 137.5 180 47.2
Medtr1g007170 Medicago truncatula HOM05D005388 ORTHO05D006281 1.6e-30 137.5 162 50.6
Peaxi162Scf00558g00317 Petunia axillaris HOM05D005388 ORTHO05D006281 1.6e-30 137.5 155 51.0
CSS0028564 Camellia sinensis var. sinensis HOM05D005388 ORTHO05D006281 2.1e-30 137.1 159 50.3
FAN13G1156 Fragaria x ananassa HOM05D005388 ORTHO05D006281 2.1e-30 137.1 221 41.2
Potri.012G107500 Populus trichocarpa HOM05D005388 ORTHO05D006281 2.1e-30 137.1 156 51.9
Sc04g0003930 Simmondsia chinensis HOM05D005388 ORTHO05D006281 2.1e-30 137.1 224 38.4
CiPaw.09G101500 Carya illinoinensis HOM05D005388 ORTHO05D006281 3.6e-30 136.3 181 47.0
PSO339G1452 Papaver somniferum HOM05D005388 ORTHO05D006281 3.6e-30 136.3 176 48.3
Psat6g035160 Pisum sativum HOM05D005388 ORTHO05D006281 3.6e-30 136.3 173 50.3
CsaV3_7G034450 Cucumis sativus L. HOM05D005388 ORTHO05D006281 4.7e-30 136.0 149 49.7
FAN18G0596 Fragaria x ananassa HOM05D005388 ORTHO05D006281 4.7e-30 136.0 221 40.7
FAN18G3073 Fragaria x ananassa HOM05D005388 ORTHO05D006281 4.7e-30 136.0 221 40.7
Phvul.001G115300 Phaseolus vulgaris HOM05D005388 ORTHO05D006281 4.7e-30 136.0 154 51.9
Sabra16G0117800 Salix brachista HOM05D005388 ORTHO05D006281 4.7e-30 136.0 156 48.7
vmacro03650 Vaccinium macrocarpon HOM05D005388 ORTHO05D006281 4.7e-30 136.0 158 50.0
MELO3C024353.2 Cucumis melo HOM05D005388 ORTHO05D006281 8.0e-30 135.2 216 39.4
AUR62009518 Chenopodium quinoa HOM05D005388 ORTHO05D006281 1.8e-29 134.0 165 50.3
FAN08G1835 Fragaria x ananassa HOM05D005388 ORTHO05D006281 1.8e-29 134.0 221 40.7
PSO384G2339 Papaver somniferum HOM05D005388 ORTHO05D006281 1.8e-29 134.0 217 42.4
HPP92_008146 Vanilla planifolia HOM05D005388 ORTHO05D006281 2.3e-29 133.7 163 50.3
AUR62034770 Chenopodium quinoa HOM05D005388 ORTHO05D006281 3.0e-29 133.3 162 48.8
ClCG09G000980 Citrullus lanatus HOM05D005388 ORTHO05D006281 3.0e-29 133.3 217 38.7
FAN04G2939 Fragaria x ananassa HOM05D005388 ORTHO05D006281 4.0e-29 132.9 226 40.3
COL.COLO4_31868 Corchorus olitorius HOM05D005388 ORTHO05D006281 5.2e-29 132.5 158 50.0
Glyma.16G037200 Glycine max HOM05D005388 ORTHO05D006281 5.2e-29 132.5 132 53.0
SalBow8G2877 Salvia bowleyana HOM05D005388 ORTHO05D006281 6.8e-29 132.1 139 56.8
ECA234G3218 Erigeron canadensis HOM05D005388 ORTHO05D006281 1.2e-28 131.3 144 50.7
Eucgr.A00642 Eucalyptus grandis HOM05D005388 ORTHO05D006281 1.2e-28 131.3 146 50.7
MD10G1330400 Malus domestica HOM05D005388 ORTHO05D006281 1.2e-28 131.3 162 51.2
THA.LOC104812711 Tarenaya hassleriana HOM05D005388 ORTHO05D006281 1.2e-28 131.3 135 53.3
AT1G31220 Arabidopsis thaliana HOM05D005388 ORTHO05D006281 1.5e-28 131.0 144 51.4
Cpa.g.sc89.56 Carica papaya HOM05D005388 ORTHO05D006281 1.5e-28 131.0 133 55.6
Duzib160G0783 Durio zibethinus HOM05D005388 ORTHO05D006281 1.5e-28 131.0 224 41.1
Duzib235G1331 Durio zibethinus HOM05D005388 ORTHO05D006281 2.0e-28 130.6 158 50.0
Ca_19224_v3 Cicer arietinum L. HOM05D005388 ORTHO05D006281 3.4e-28 129.8 193 45.6
Sp1g27030 Schrenkiella parvula HOM05D005388 ORTHO05D006281 3.4e-28 129.8 148 51.4
BcaB07g32784 Brassica carinata HOM05D005388 ORTHO05D006281 7.5e-28 128.6 148 49.3
Glyma.19G115900 Glycine max HOM05D005388 ORTHO05D006281 7.5e-28 128.6 156 46.8
AL2G29970 Arabidopsis lyrata HOM05D005388 ORTHO05D006281 9.8e-28 128.3 144 52.1
AL1G49260 Arabidopsis lyrata HOM05D005388 ORTHO05D006281 1.7e-27 127.5 144 50.0
CARHR030700 Cardamine hirsuta HOM05D005388 ORTHO05D006281 1.7e-27 127.5 142 50.7
MD03G1153200 Malus domestica HOM05D005388 ORTHO05D006281 2.2e-27 127.1 180 45.6
vmacro03839 Vaccinium macrocarpon HOM05D005388 ORTHO05D006281 2.2e-27 127.1 247 37.2
PGR044G2560 Punica granatum HOM05D005388 ORTHO05D006281 2.9e-27 126.7 175 44.6
Ah.00g000100 Amaranthus hybridus HOM05D005388 ORTHO05D006281 3.7e-27 126.3 176 42.6
Zm00001eb082710 Zea mays HOM05D005388 ORTHO05D006281 4.9e-27 125.9 134 53.7
Thhalv10008369m.g Eutrema salsugineum HOM05D005388 ORTHO05D006281 6.4e-27 125.6 148 49.3
Os08g0500900 Oryza sativa ssp. japonica HOM05D005388 ORTHO05D006281 6.4e-27 125.6 136 50.7
TPR.G24522 Trifolium pratense HOM05D005388 ORTHO05D006281 6.4e-27 125.6 136 53.7
Carub.0001s2962 Capsella rubella HOM05D005388 ORTHO05D006281 8.3e-27 125.2 142 50.7
A09p35020 Brassica napus HOM05D005388 ORTHO05D006281 1.1e-26 124.8 144 50.0
BraA09t39033Z Brassica rapa HOM05D005388 ORTHO05D006281 1.1e-26 124.8 144 50.0
Aqoxy7G03349 Aquilegia oxysepala HOM05D005388 ORTHO05D006281 1.4e-26 124.4 220 41.4
BolC5t31778H Brassica oleracea HOM05D005388 ORTHO05D006281 1.4e-26 124.4 146 50.0
Haze_06907 Corylus avellana HOM05D005388 ORTHO05D006281 1.4e-26 124.4 274 34.7
EL10Ac5g11305 Beta vulgaris HOM05D005388 ORTHO05D006281 1.8e-26 124.0 165 47.9
DCAR_027849 Daucus carota HOM05D005388 ORTHO05D006281 2.4e-26 123.6 182 46.7
C05p30410 Brassica napus HOM05D005388 ORTHO05D006281 2.0e-25 120.6 146 48.6
Lj2A262G50 Lonicera japonica HOM05D005388 ORTHO05D006281 4.6e-25 119.4 112 60.7
Os05g0270800 Oryza sativa ssp. japonica HOM05D005388 ORTHO05D006281 4.6e-25 119.4 136 49.3
BcaC05g27152 Brassica carinata HOM05D005388 ORTHO05D006281 5.9e-25 119.0 146 47.9
ATR0561G011 Amborella trichopoda HOM05D005388 ORTHO05D006281 1.0e-24 118.2 141 46.1
Aa31LG9G16020 Aethionema arabicum HOM05D005388 ORTHO05D006281 1.9e-23 114.0 151 46.4
FAN13G0148 Fragaria x ananassa HOM05D001252 ORTHO05D001263 2.5e-23 113.6 159 44.0
FAN04G2929 Fragaria x ananassa HOM05D001252 ORTHO05D006281 4.3e-23 112.8 159 44.0
FAN11G1084 Fragaria x ananassa HOM05D001252 ORTHO05D006281 4.3e-23 112.8 159 44.0
FAN24G1366 Fragaria x ananassa HOM05D001252 ORTHO05D006281 4.3e-23 112.8 159 44.0
Rhsim04G0092900 Rhododendron simsii HOM05D005388 ORTHO05D006281 1.4e-21 107.8 197 38.6
Rhsim04G0088400 Rhododendron simsii HOM05D005388 ORTHO05D006281 1.8e-21 107.5 116 50.0
FAN11G2435 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.1e-21 106.7 111 52.3
Mapoly0084s0080 Marchantia polymorpha HOM05D005388 ORTHO05D006281 1.2e-20 104.8 134 44.8
SMO353G0366 Selaginella moellendorffii HOM05D005388 ORTHO05D006281 2.0e-20 104.0 132 43.9
Rhsim04G0089100 Rhododendron simsii HOM05D005388 ORTHO05D006281 3.7e-19 99.8 245 32.7
CBR_g45412 Chara braunii HOM05D005388 ORTHO05D006281 8.3e-19 98.6 149 36.2
Pp3c13_14970 Physcomitrium patens HOM05D005388 ORTHO05D006281 2.4e-18 97.1 151 40.4
CDE04G0494 Ceratophyllum demersum HOM05D005388 ORTHO05D006281 2.0e-17 94.0 143 39.2
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.7e-17 93.6 155 40.6
SGA_v2.0_scaffold49G18245 Striga asiatica HOM05D005388 ORTHO05D006281 1.7e-16 90.9 100 51.0
Cre12.g550700 Chlamydomonas reinhardtii HOM05D005388 ORTHO05D006281 1.6e-14 84.3 161 35.4
Haze_05515 Corylus avellana HOM05D005388 ORTHO05D006281 1.8e-13 80.9 246 30.5
Hund08510 Selenicereus undatus HOM05D005388 ORTHO05D006281 2.6e-12 77.0 117 41.0
MCO11G941 Micromonas commoda HOM05D005388 ORTHO05D006281 4.4e-12 76.3 160 32.5
AagrBONN_evm.TU.Sc2ySwM_369.551 Anthoceros agrestis HOM05D005388 ORTHO05D006281 1.7e-11 74.3 81 45.7
Os08g0501132 Oryza sativa ssp. japonica HOM05D005388 ORTHO05D006281 1.6e-09 67.8 123 39.0
PRCOL_00005535 Prasinoderma coloniale HOM05D005388 ORTHO05D006281 1.3e-08 64.7 133 33.1
VMungo0647G0909 Vigna mungo HOM05D005388 ORTHO05D006281 1.3e-08 64.7 89 44.9
DCAR_016082 Daucus carota HOM05D005388 ORTHO05D006281 1.6e-06 57.8 46 60.9


User provided reference genes

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