Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 0.0e+00 1781.1 938 100.0
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 0.0e+00 1119.0 984 65.9
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 7.3e-306 1053.9 1077 59.1
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 2.9e-286 988.8 1031 57.9
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.6e-268 929.9 1095 53.6
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 4.6e-268 928.3 1095 53.5
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 6.0e-260 901.4 1012 53.8
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 5.3e-248 861.7 1012 52.8
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 3.9e-243 845.5 852 57.7
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 3.4e-239 832.4 1022 52.1
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 7.6e-239 831.2 1002 50.6
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.3e-238 830.5 1020 51.4
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 1.7e-238 830.1 987 51.9
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.9e-237 826.6 1002 51.0
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 8.7e-235 817.8 1021 51.7
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 8.5e-230 801.2 829 56.7
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 3.7e-225 785.8 991 51.9
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 6.3e-225 785.0 830 56.0
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 2.3e-219 766.5 742 59.8
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 3.9e-219 765.8 1084 46.2
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 2.0e-218 763.5 785 56.1
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 9.7e-218 761.1 858 53.0
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 1.3e-217 760.8 790 56.3
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 3.1e-216 756.1 850 53.9
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 4.1e-216 755.7 1031 48.9
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 2.6e-215 753.1 778 56.2
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 3.5e-215 752.7 1022 47.3
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 7.7e-215 751.5 803 54.9
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.7e-214 750.4 782 55.4
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 6.5e-214 748.4 976 48.8
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.1e-213 747.7 780 56.3
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 3.6e-212 742.7 798 53.9
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 8.0e-212 741.5 1025 49.4
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 8.0e-212 741.5 969 50.6
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 6.7e-211 738.4 1178 43.4
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.3e-209 734.2 828 53.1
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 5.3e-208 728.8 789 55.3
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 5.9e-207 725.3 994 48.5
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 2.9e-206 723.0 777 55.6
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 5.0e-206 722.2 876 52.4
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 1.1e-205 721.1 773 53.6
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 1.9e-205 720.3 826 53.8
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 4.2e-205 719.2 830 52.4
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 5.5e-205 718.8 855 51.8
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 7.2e-205 718.4 879 51.2
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 7.2e-205 718.4 792 53.0
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 9.8e-202 708.0 791 53.7
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 9.8e-202 708.0 855 51.6
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 8.3e-201 704.9 801 53.6
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 8.3e-201 704.9 788 53.3
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.4e-200 704.1 876 50.6
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 7.0e-200 701.8 995 47.2
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 1.2e-199 701.0 824 52.1
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 1.2e-199 701.0 832 52.2
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 1.6e-199 700.7 854 51.6
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.0e-199 700.3 1026 46.2
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 1.3e-198 697.6 775 52.6
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 2.3e-198 696.8 951 48.5
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 3.8e-198 696.0 801 52.9
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 2.8e-196 689.9 801 52.6
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 2.8e-196 689.9 782 52.9
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 1.0e-195 688.0 815 51.9
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 1.4e-195 687.6 795 53.1
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.7e-193 680.6 785 53.6
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 2.2e-193 680.2 857 49.9
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 8.3e-193 678.3 874 48.7
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 1.8e-192 677.2 852 50.8
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 3.1e-192 676.4 1006 44.9
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.3e-190 671.0 816 52.0
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.3e-190 670.2 816 52.0
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 3.8e-190 669.5 866 49.1
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 5.0e-190 669.1 883 48.0
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 1.9e-189 667.2 718 54.9
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 3.3e-189 666.4 791 51.7
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 1.4e-187 661.0 784 50.0
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.0e-186 657.1 820 50.2
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 2.6e-186 656.8 874 47.5
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.4e-186 656.4 833 49.8
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 7.5e-186 655.2 852 49.1
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 7.5e-186 655.2 833 50.2
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 1.3e-185 654.4 819 50.1
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 1.7e-185 654.1 780 50.4
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 1.1e-184 651.4 779 50.1
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 2.4e-184 650.2 849 47.6
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 3.2e-184 649.8 853 47.8
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 5.4e-184 649.0 1026 44.2
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 3.5e-183 646.4 1133 42.7
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 3.5e-183 646.4 848 47.3
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 5.9e-183 645.6 779 49.9
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 1.0e-182 644.8 808 49.0
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 1.7e-182 644.0 786 48.2
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 3.0e-182 643.3 803 51.2
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 3.0e-182 643.3 770 48.8
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 3.0e-182 643.3 770 48.8
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 7.3e-181 638.6 861 46.2
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 9.5e-181 638.3 779 50.8
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 5.2e-179 632.5 942 47.2
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 8.9e-179 631.7 846 45.9
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 1.5e-178 630.9 823 49.2
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 3.4e-178 629.8 900 45.3
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 6.4e-177 625.5 760 50.4
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 8.3e-177 625.2 866 45.4
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.4e-176 624.4 861 45.6
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 3.2e-176 623.2 1088 41.3
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 2.0e-175 620.5 836 45.1
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 2.7e-175 620.2 760 50.3
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 7.8e-175 618.6 800 49.8
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 3.9e-174 616.3 773 48.5
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 6.6e-174 615.5 766 50.0
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.9e-173 614.0 769 48.1
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 5.6e-173 612.5 860 46.0
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.6e-172 610.9 771 48.2
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 2.1e-172 610.5 1079 41.2
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.1e-171 608.2 879 46.6
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 1.8e-171 607.4 748 49.7
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 4.0e-171 606.3 1073 41.1
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 6.4e-169 599.0 780 47.1
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 5.4e-168 595.9 726 49.7
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 7.1e-168 595.5 796 46.4
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 2.1e-167 594.0 779 46.2
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 3.0e-166 590.1 784 46.6
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 1.1e-165 588.2 716 50.0
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 3.4e-162 576.6 769 47.3
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 7.1e-160 568.9 776 45.6
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 3.9e-158 563.1 801 43.8
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 1.0e-150 538.5 706 47.9
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.3e-148 531.6 802 46.6
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 3.8e-129 466.8 1029 38.5
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 8.4e-129 465.7 1031 37.7
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 1.4e-118 431.8 1104 33.2
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.4e-118 431.8 791 38.1
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.4e-118 431.8 791 38.1
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 4.7e-111 406.8 736 37.5
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 5.7e-109 399.8 521 49.9
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 4.5e-106 390.2 664 40.1
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 1.7e-89 335.1 314 57.6
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 2.2e-84 318.2 318 59.1
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 8.9e-78 296.2 287 56.1
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 7.8e-74 283.1 951 28.7
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 5.6e-72 276.9 357 50.4
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 2.0e-69 268.5 394 47.5
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.5e-64 251.5 357 47.1
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 5.2e-62 243.8 363 43.0
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 2.1e-58 231.9 251 55.0
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 3.7e-52 211.1 259 46.3
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 5.8e-45 187.2 137 70.1
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 4.9e-44 184.1 412 36.9
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 5.3e-38 164.1 177 57.6
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.3e-33 149.4 143 60.8
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 3.0e-33 148.3 195 44.1
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.6e-31 142.5 200 47.5
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 4.9e-28 131.0 172 49.4
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 6.4e-28 130.6 93 72.0
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 2.4e-27 128.6 111 60.4
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 1.0e-25 123.2 156 43.6
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 6.9e-22 110.5 85 65.9
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 2.7e-18 98.6 78 65.4
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 3.5e-18 98.2 57 89.5
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 3.5e-18 98.2 89 56.2
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 1.8e-17 95.9 69 65.2
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 6.7e-17 94.0 65 70.8
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 1.5e-16 92.8 89 53.9
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 1.9e-16 92.4 65 66.2
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.5e-16 92.0 67 73.1
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 9.6e-16 90.1 118 44.1
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 1.6e-15 89.4 76 61.8
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 2.1e-15 89.0 71 62.0
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 2.0e-13 82.4 59 64.4
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.2e-12 79.0 64 67.2
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.5e-12 77.4 69 56.5
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.4e-11 76.3 92 47.8
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 9.3e-11 73.6 88 50.0
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 1.2e-10 73.2 78 50.0
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 6.1e-10 70.9 126 38.1
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 6.7e-09 67.4 40 87.5
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 8.7e-09 67.0 66 50.0
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 3.3e-08 65.1 114 35.1
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 7.4e-08 63.9 97 39.2
MCO02G174 Micromonas commoda HOM05D003782 ORTHO05D004361 7.4e-08 63.9 307 27.0
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 1.3e-07 63.2 88 39.8
MBI19_g13594_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 1.1e-06 60.1 81 35.8
MBI19_g07393_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 6.9e-06 57.4 54 48.1


User provided reference genes

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