Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01417 Erythranthe guttata HOM05D001425 ORTHO05D001272 1.3e-76 289.7 152 100.0
MSTRG.16167 Avicennia marina HOM05D001425 ORTHO05D001272 7.2e-38 161.0 118 72.0
SalBow7G3660 Salvia bowleyana HOM05D001425 ORTHO05D001272 1.6e-37 159.8 117 74.4
MSTRG.13230 Avicennia marina HOM05D001425 ORTHO05D001272 1.5e-35 153.3 122 71.3
MSTRG.7426 Avicennia marina HOM05D001425 ORTHO05D001272 3.2e-30 135.6 118 62.7
SGA_v2.0_scaffold1G00076 Striga asiatica HOM05D001425 ORTHO05D001272 6.1e-29 131.3 116 61.2
Migut.L00714 Erythranthe guttata HOM05D001425 ORTHO05D001272 1.0e-28 130.6 125 59.2
Oeu041734.1 Olea europaea HOM05D001425 ORTHO05D001272 5.2e-28 128.3 119 61.3
Oeu060166.1 Olea europaea HOM05D001425 ORTHO05D001272 3.4e-27 125.6 122 59.8
Oeu039884.1 Olea europaea HOM05D001425 ORTHO05D001272 6.3e-26 121.3 112 60.7
Dinv12758 Davidia involucrata HOM05D001425 ORTHO05D001272 1.8e-25 119.8 123 56.1
Cc02_g15540 Coffea canephora HOM05D001425 ORTHO05D001272 2.0e-24 116.3 116 54.3
Peaxi162Scf00405g00117 Petunia axillaris HOM05D001425 ORTHO05D001272 1.0e-23 114.0 120 55.8
Nitab4.5_0002458g0050 Nicotiana tabacum HOM05D001425 ORTHO05D001272 2.9e-23 112.5 121 53.7
Solyc03g006040.3 Solanum lycopersicum HOM05D001425 ORTHO05D001272 6.5e-23 111.3 118 53.4
GSVIVG01021251001 Vitis vinifera HOM05D001425 ORTHO05D001272 1.1e-22 110.5 116 54.3
Dinv32343 Davidia involucrata HOM05D001425 ORTHO05D001272 1.5e-22 110.2 118 52.5
Sopen03g002050 Solanum pennellii HOM05D001425 ORTHO05D001272 1.5e-22 110.2 118 53.4
CAN.G866.32 Capsicum annuum HOM05D001425 ORTHO05D001272 1.2e-21 107.1 128 49.2
Nitab4.5_0005428g0040 Nicotiana tabacum HOM05D001425 ORTHO05D001272 8.8e-20 100.9 134 48.5
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.8e-19 97.4 118 48.3
Atru.chr10.1575 Acer truncatum HOM05D001425 ORTHO05D001272 2.4e-17 92.8 134 47.0
PGSC0003DMG400026751 Solanum tuberosum HOM05D001425 ORTHO05D001272 2.4e-17 92.8 103 51.5
TWI09G0354 Tripterygium wilfordii HOM05D001425 ORTHO05D001272 2.4e-17 92.8 130 45.4
Actinidia35598 Actinidia chinensis HOM05D001425 ORTHO05D001272 5.4e-17 91.7 96 54.2
Actinidia16777 Actinidia chinensis HOM05D001425 ORTHO05D001272 2.7e-16 89.4 125 45.6
COL.COLO4_31243 Corchorus olitorius HOM05D001425 ORTHO05D001272 1.1e-14 84.0 133 40.6
Thecc.06G166200 Theobroma cacao HOM05D001425 ORTHO05D001272 1.1e-14 84.0 130 40.8
MD10G1275900 Malus domestica HOM05D001425 ORTHO05D001272 3.3e-14 82.4 133 45.1
Medtr8g085150 Medicago truncatula HOM05D001425 ORTHO05D001272 3.3e-14 82.4 134 40.3
DCAR_005135 Daucus carota HOM05D001425 ORTHO05D001272 4.3e-14 82.0 121 43.0
Lalb_Chr07g0186331 Lupinus albus HOM05D001425 ORTHO05D001272 5.6e-14 81.6 132 38.6
Potri.004G060800 Populus trichocarpa HOM05D001425 ORTHO05D001272 5.6e-14 81.6 141 42.6
PSO170G6757 Papaver somniferum HOM05D001425 ORTHO05D001272 7.3e-14 81.3 102 52.0
TAR626G1246 Trochodendron aralioides HOM05D001425 ORTHO05D001272 1.2e-13 80.5 121 45.5
Duzib160G0077 Durio zibethinus HOM05D001425 ORTHO05D001272 1.6e-13 80.1 134 40.3
Gorai.011G037600 Gossypium raimondii HOM05D001425 ORTHO05D001272 1.6e-13 80.1 123 41.5
PSO782G3214 Papaver somniferum HOM05D001425 ORTHO05D001272 1.6e-13 80.1 102 51.0
Gohir.D10G035700 Gossypium hirsutum HOM05D001425 ORTHO05D001272 2.1e-13 79.7 120 41.7
Gohir.A10G035000 Gossypium hirsutum HOM05D001425 ORTHO05D001272 2.8e-13 79.3 120 40.8
Nn3g21110 Nelumbo nucifera HOM05D001425 ORTHO05D001272 2.8e-13 79.3 119 45.4
Duzib235G0112 Durio zibethinus HOM05D001425 ORTHO05D001272 6.1e-13 78.2 132 41.7
Manes.16G038700 Manihot esculenta HOM05D001425 ORTHO05D001272 6.1e-13 78.2 133 43.6
Gohir.D06G138400 Gossypium hirsutum HOM05D001425 ORTHO05D001272 8.0e-13 77.8 132 40.2
TPR.G6742 Trifolium pratense HOM05D001425 ORTHO05D001272 8.0e-13 77.8 126 42.9
Prupe.4G066300 Prunus persica HOM05D001425 ORTHO05D001272 1.4e-12 77.0 146 41.1
Ciclev10016999m.g Citrus clementina HOM05D001425 ORTHO05D001272 1.8e-12 76.6 132 42.4
Manes.17G058800 Manihot esculenta HOM05D001425 ORTHO05D001272 1.8e-12 76.6 142 39.4
Psat0s2741g0080 Pisum sativum HOM05D001425 ORTHO05D001272 1.8e-12 76.6 139 37.4
Gohir.A06G132900 Gossypium hirsutum HOM05D001425 ORTHO05D001272 3.0e-12 75.9 132 39.4
Gorai.010G160900 Gossypium raimondii HOM05D001425 ORTHO05D001272 3.0e-12 75.9 132 39.4
TAR629G2569 Trochodendron aralioides HOM05D001425 ORTHO05D001272 3.0e-12 75.9 116 45.7
Nn1g04511 Nelumbo nucifera HOM05D001425 ORTHO05D001272 4.0e-12 75.5 121 43.8
Gohir.A05G153700 Gossypium hirsutum HOM05D001425 ORTHO05D001272 8.9e-12 74.3 132 39.4
Gohir.D05G156400 Gossypium hirsutum HOM05D001425 ORTHO05D001272 8.9e-12 74.3 132 39.4
Gorai.009G160900 Gossypium raimondii HOM05D001425 ORTHO05D001272 8.9e-12 74.3 133 39.1
Glyma.05G160700 Glycine max HOM05D001425 ORTHO05D001272 3.4e-11 72.4 136 34.6
Potri.011G070000 Populus trichocarpa HOM05D001425 ORTHO05D001272 3.4e-11 72.4 132 42.4
Ca_17900_v3 Cicer arietinum L. HOM05D001425 ORTHO05D001272 4.4e-11 72.0 131 39.7
Lj4g0009651 Lotus japonicus HOM05D001425 ORTHO05D001272 4.4e-11 72.0 127 37.0
Sabra04G0040100 Salix brachista HOM05D001425 ORTHO05D001272 5.7e-11 71.6 116 46.6
GSVIVG01020751001 Vitis vinifera HOM05D001425 ORTHO05D001272 5.7e-11 71.6 97 46.4
RcHm_v2.0_Chr5g0011571 Rosa chinensis HOM05D001425 ORTHO05D001272 7.5e-11 71.2 135 37.8
VMungo0251G3022 Vigna mungo HOM05D001425 ORTHO05D001272 7.5e-11 71.2 130 36.9
MD05G1295800 Malus domestica HOM05D001425 ORTHO05D001272 9.8e-11 70.9 133 40.6
Sabra11G0058000 Salix brachista HOM05D001425 ORTHO05D001272 1.3e-10 70.5 145 40.0
Lalb_Chr12g0204971 Lupinus albus HOM05D001425 ORTHO05D001272 1.7e-10 70.1 126 38.1
FvH4_3g07370 Fragaria vesca HOM05D001425 ORTHO05D001272 2.2e-10 69.7 134 39.6
FAN11G3009 Fragaria x ananassa HOM05D001425 ORTHO05D001272 2.9e-10 69.3 139 38.1
FAN25G1823 Fragaria x ananassa HOM05D001425 ORTHO05D001272 3.7e-10 68.9 134 38.8
arahy.Tifrunner.gnm1.ann1.A8KLXT Arachis hypogaea HOM05D001425 ORTHO05D001272 6.4e-10 68.2 115 37.4
FAN16G2157 Fragaria x ananassa HOM05D001425 ORTHO05D001272 6.4e-10 68.2 134 38.8
Medtr8g087020 Medicago truncatula HOM05D001425 ORTHO05D001272 6.4e-10 68.2 134 35.8
Eucgr.D00475 Eucalyptus grandis HOM05D001425 ORTHO05D001272 1.4e-09 67.0 130 37.7
Hma1.2p1_0829F.1_g225230 Hydrangea macrophylla HOM05D001425 ORTHO05D001272 3.2e-09 65.9 81 49.4
arahy.Tifrunner.gnm1.ann1.T2RFJB Arachis hypogaea HOM05D001425 ORTHO05D001272 5.4e-09 65.1 117 36.8
Glyma.08G118100 Glycine max HOM05D001425 ORTHO05D001272 5.4e-09 65.1 130 33.1
Phvul.002G240800 Phaseolus vulgaris HOM05D001425 ORTHO05D001272 5.4e-09 65.1 130 34.6
AT1G29270 Arabidopsis thaliana HOM05D001425 ORTHO05D001272 7.0e-09 64.7 113 41.6
EL10Ac8g20563 Beta vulgaris HOM05D001425 ORTHO05D001272 7.0e-09 64.7 129 38.8
FAN21G1795 Fragaria x ananassa HOM05D001425 ORTHO05D001272 9.2e-09 64.3 134 38.1
FAN13G2418 Fragaria x ananassa HOM05D001425 ORTHO05D001272 1.2e-08 63.9 139 37.4
Cpa.g.sc7.94 Carica papaya HOM05D001425 ORTHO05D001272 1.6e-08 63.5 146 37.0
Sed0026621 Sechium edule HOM05D001425 ORTHO05D001272 1.6e-08 63.5 111 40.5
QL05p049746 Quercus lobata HOM05D001425 ORTHO05D001272 4.6e-08 62.0 134 37.3
Aqoxy1G01998 Aquilegia oxysepala HOM05D001425 ORTHO05D001272 7.8e-08 61.2 120 32.5
MELO3C007201.2 Cucumis melo HOM05D001425 ORTHO05D001272 7.8e-08 61.2 116 37.9
Hund21446 Selenicereus undatus HOM05D001425 ORTHO05D001272 1.3e-07 60.5 130 35.4
THA.LOC104812642 Tarenaya hassleriana HOM05D001425 ORTHO05D001272 1.7e-07 60.1 104 40.4
ClCG01G023870 Citrullus lanatus HOM05D001425 ORTHO05D001272 2.3e-07 59.7 111 40.5
Sed0000998 Sechium edule HOM05D001425 ORTHO05D001272 2.3e-07 59.7 123 34.1
CsaV3_6G051020 Cucumis sativus L. HOM05D001425 ORTHO05D001272 3.0e-07 59.3 108 39.8
PGR042G0512 Punica granatum HOM05D001425 ORTHO05D001272 3.0e-07 59.3 132 35.6
AL1G43060 Arabidopsis lyrata HOM05D001425 ORTHO05D001272 5.0e-07 58.5 98 40.8
CDE06G2729 Ceratophyllum demersum HOM05D001425 ORTHO05D001272 5.0e-07 58.5 122 34.4
ATR0012G037 Amborella trichopoda HOM05D001425 ORTHO05D001272 3.3e-06 55.8 122 34.4
BcaB03g13893 Brassica carinata HOM05D001425 ORTHO05D001272 5.6e-06 55.1 113 38.1
Sp1g25200 Schrenkiella parvula HOM05D001425 ORTHO05D001272 5.6e-06 55.1 94 42.6


User provided reference genes

Program Settings