Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 3.6e-68 261.5 139 100.0
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 6.0e-23 111.3 145 51.7
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 4.7e-20 101.7 133 55.6
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 3.2e-16 89.0 125 50.4
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.1e-14 81.6 125 46.4
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 5.1e-14 81.6 139 44.6
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 6.6e-14 81.3 134 43.3
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 8.7e-14 80.9 122 43.4
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.5e-13 80.1 125 48.0
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 4.3e-13 78.6 125 46.4
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.6e-12 76.6 116 41.4
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.6e-12 76.6 115 45.2
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 2.8e-12 75.9 115 44.3
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.6e-12 75.5 119 45.4
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.8e-12 75.1 115 44.3
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 6.9e-11 71.2 134 41.0
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 2.6e-10 69.3 131 44.3
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 5.8e-10 68.2 116 45.7
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.3e-09 67.0 123 39.0
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 6.4e-09 64.7 103 44.7
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.1e-08 63.9 121 38.8
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.1e-08 63.9 129 41.1
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.4e-08 63.5 121 38.8
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.9e-08 63.2 121 38.8
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 3.2e-08 62.4 124 37.9
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 3.2e-08 62.4 124 40.3
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 7.1e-08 61.2 117 41.9
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 7.1e-08 61.2 114 37.7
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 9.3e-08 60.8 116 41.4
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 9.3e-08 60.8 110 40.9
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.1e-07 59.7 121 42.1
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 2.1e-07 59.7 124 38.7
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 2.7e-07 59.3 121 43.0
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.5e-07 58.9 119 42.0
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 6.0e-07 58.2 107 43.0
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 6.0e-07 58.2 107 43.0
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 6.0e-07 58.2 107 43.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.0e-06 57.4 119 41.2
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.3e-06 57.0 133 35.3
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.7e-06 56.6 108 41.7
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.7e-06 56.6 104 44.2
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 2.3e-06 56.2 110 43.6
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.3e-06 56.2 118 40.7
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 3.9e-06 55.5 106 42.5
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 5.1e-06 55.1 107 43.0
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 6.6e-06 54.7 124 37.9
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 6.6e-06 54.7 130 33.8
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 6.6e-06 54.7 110 40.0
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 8.7e-06 54.3 127 37.8
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 8.7e-06 54.3 133 34.6
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 8.7e-06 54.3 117 38.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 8.7e-06 54.3 101 38.6


User provided reference genes

Program Settings