Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01320 Erythranthe guttata HOM05D001896 ORTHO05D001862 1.9e-86 322.4 158 100.0
Oeu015171.1 Olea europaea HOM05D001896 ORTHO05D001862 5.2e-31 138.3 160 45.6
SalBow8G0760 Salvia bowleyana HOM05D001896 ORTHO05D001862 1.3e-26 123.6 155 45.8
Dinv16071 Davidia involucrata HOM05D001896 ORTHO05D001862 1.2e-19 100.5 161 39.1
Dinv42246 Davidia involucrata HOM05D001896 ORTHO05D001862 6.0e-19 98.2 161 38.5
Ciclev10030063m.g Citrus clementina HOM05D001896 ORTHO05D001862 4.3e-17 92.0 149 33.6
Ciclev10029922m.g Citrus clementina HOM05D001896 ORTHO05D001862 3.6e-16 89.0 135 34.8
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 4.7e-16 88.6 156 32.7
Duzib147G1417 Durio zibethinus HOM05D001896 ORTHO05D001862 1.1e-15 87.4 156 31.4
DCAR_007834 Daucus carota HOM05D001896 ORTHO05D001862 1.2e-14 84.0 158 31.6
Oeu013335.1 Olea europaea HOM05D001896 ORTHO05D001862 1.2e-14 84.0 144 34.7
CiPaw.02G001600 Carya illinoinensis HOM05D001896 ORTHO05D001862 2.0e-14 83.2 157 30.6
Nitab4.5_0003129g0070 Nicotiana tabacum HOM05D001896 ORTHO05D001862 4.4e-14 82.0 149 35.6
PGR142G1913 Punica granatum HOM05D001896 ORTHO05D001862 4.4e-14 82.0 152 33.6
Nn6g34510 Nelumbo nucifera HOM05D001896 ORTHO05D001862 5.8e-14 81.6 156 32.1
Cpa.g.sc106.35 Carica papaya HOM05D001896 ORTHO05D001862 9.8e-14 80.9 161 32.3
Prupe.6G218500 Prunus persica HOM05D001896 ORTHO05D001862 9.8e-14 80.9 159 30.8
Oeu021445.1 Olea europaea HOM05D001896 ORTHO05D001862 1.7e-13 80.1 152 32.2
QL11p029532 Quercus lobata HOM05D001896 ORTHO05D001862 1.7e-13 80.1 154 32.5
CiPaw.05G020300 Carya illinoinensis HOM05D001896 ORTHO05D001862 2.9e-13 79.3 152 35.5
Ciclev10026650m.g Citrus clementina HOM05D001896 ORTHO05D001862 3.7e-13 79.0 150 31.3
Thecc.02G119300 Theobroma cacao HOM05D001896 ORTHO05D001862 3.7e-13 79.0 153 34.6
TAR625G0391 Trochodendron aralioides HOM05D001896 ORTHO05D001862 3.7e-13 79.0 150 32.0
Gohir.A02G150400 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.9e-13 78.6 152 30.9
Potri.009G086000 Populus trichocarpa HOM05D001896 ORTHO05D001862 4.9e-13 78.6 164 31.7
Cc07_g07270 Coffea canephora HOM05D001896 ORTHO05D001862 8.3e-13 77.8 148 34.5
COL.COLO4_11600 Corchorus olitorius HOM05D001896 ORTHO05D001862 2.4e-12 76.3 156 31.4
Nn5g30636 Nelumbo nucifera HOM05D001896 ORTHO05D001862 4.1e-12 75.5 163 29.4
Peaxi162Scf00548g00211 Petunia axillaris HOM05D001896 ORTHO05D001862 4.1e-12 75.5 136 31.6
Gorai.003G031600 Gossypium raimondii HOM05D001896 ORTHO05D001862 7.1e-12 74.7 151 30.5
Aqoxy6G02538 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 1.2e-11 73.9 148 29.7
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 1.2e-11 73.9 155 32.9
Manes.12G116200 Manihot esculenta HOM05D001896 ORTHO05D001862 1.2e-11 73.9 155 29.7
Atru.chr5.2309 Acer truncatum HOM05D001896 ORTHO05D001862 2.1e-11 73.2 131 32.8
TAR381G1204 Trochodendron aralioides HOM05D001896 ORTHO05D001862 2.1e-11 73.2 158 30.4
Gohir.D03G029900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.7e-11 72.8 152 28.9
Atru.chr3.1040 Acer truncatum HOM05D001896 ORTHO05D001862 3.5e-11 72.4 155 31.6
COL.COLO4_32491 Corchorus olitorius HOM05D001896 ORTHO05D001862 3.5e-11 72.4 112 34.8
QL06p039341 Quercus lobata HOM05D001896 ORTHO05D001862 3.5e-11 72.4 158 31.0
Duzib264G0605 Durio zibethinus HOM05D001896 ORTHO05D001862 4.6e-11 72.0 161 27.3
Gohir.A12G018801 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.6e-11 72.0 152 32.9
Atru.chr5.2308 Acer truncatum HOM05D001896 ORTHO05D001862 7.8e-11 71.2 155 34.2
Duzib052G0412 Durio zibethinus HOM05D001896 ORTHO05D001862 7.8e-11 71.2 156 30.1
Potri.001G290400 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.0e-10 70.9 162 29.0
Eucgr.I00689 Eucalyptus grandis HOM05D001896 ORTHO05D001862 1.3e-10 70.5 148 31.1
Cfa004148 Carpinus fangiana HOM05D001896 ORTHO05D001862 1.7e-10 70.1 156 29.5
Oeu053665.1 Olea europaea HOM05D001896 ORTHO05D001862 1.7e-10 70.1 151 33.1
GSVIVG01009317001 Vitis vinifera HOM05D001896 ORTHO05D001862 1.7e-10 70.1 150 32.0
Lj7P110T16 Lonicera japonica HOM05D001896 ORTHO05D001862 2.3e-10 69.7 165 30.9
Aqoxy6G02540 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 3.0e-10 69.3 145 30.3
Ciclev10030194m.g Citrus clementina HOM05D001896 ORTHO05D001862 3.9e-10 68.9 149 36.2
Gohir.D12G019300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 3.9e-10 68.9 152 32.2
Gorai.008G019600 Gossypium raimondii HOM05D001896 ORTHO05D001862 3.9e-10 68.9 152 32.2
Nitab4.5_0000142g0300 Nicotiana tabacum HOM05D001896 ORTHO05D001862 3.9e-10 68.9 147 33.3
Nitab4.5_0003129g0080 Nicotiana tabacum HOM05D001896 ORTHO05D001862 5.1e-10 68.6 139 30.2
TAR628G1651 Trochodendron aralioides HOM05D001896 ORTHO05D001862 5.1e-10 68.6 150 29.3
Nitab4.5_0000142g0290 Nicotiana tabacum HOM05D001896 ORTHO05D001862 6.6e-10 68.2 139 30.9
Peaxi162Scf00449g00045 Petunia axillaris HOM05D001896 ORTHO05D001862 6.6e-10 68.2 143 31.5
PGR004G2665 Punica granatum HOM05D001896 ORTHO05D001862 6.6e-10 68.2 152 30.9
Eucgr.I01030 Eucalyptus grandis HOM05D001896 ORTHO05D001862 8.6e-10 67.8 146 34.2
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 1.1e-09 67.4 153 32.7
Gohir.D11G209900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.1e-09 67.4 144 27.8
Gorai.007G225100 Gossypium raimondii HOM05D001896 ORTHO05D001862 1.1e-09 67.4 144 27.8
MD15G1299400 Malus domestica HOM05D001896 ORTHO05D001862 1.1e-09 67.4 156 31.4
Oeu054204.1 Olea europaea HOM05D001896 ORTHO05D001862 1.1e-09 67.4 150 34.0
CSS0026617 Camellia sinensis var. sinensis HOM05D001896 ORTHO05D001862 1.5e-09 67.0 165 30.3
Glyma.17G159800 Glycine max HOM05D001896 ORTHO05D001862 1.9e-09 66.6 152 29.6
Manes.07G053000 Manihot esculenta HOM05D001896 ORTHO05D001862 1.9e-09 66.6 157 34.4
Nitab4.5_0002379g0010 Nicotiana tabacum HOM05D001896 ORTHO05D001862 1.9e-09 66.6 165 32.1
Rhsim06G0063700 Rhododendron simsii HOM05D001896 ORTHO05D001862 1.9e-09 66.6 167 29.9
VMungo0251G2220 Vigna mungo HOM05D001896 ORTHO05D001862 1.9e-09 66.6 152 30.3
Eucgr.I01031 Eucalyptus grandis HOM05D001896 ORTHO05D001862 2.5e-09 66.2 161 31.1
PGR083G2885 Punica granatum HOM05D001896 ORTHO05D001862 2.5e-09 66.2 159 30.2
Thecc.02G119200 Theobroma cacao HOM05D001896 ORTHO05D001862 2.5e-09 66.2 135 31.9
CAN.G1075.50 Capsicum annuum HOM05D001896 ORTHO05D001862 3.3e-09 65.9 149 31.5
Haze_15187 Corylus avellana HOM05D001896 ORTHO05D001862 3.3e-09 65.9 150 29.3
Potri.014G006300 Populus trichocarpa HOM05D001896 ORTHO05D001862 3.3e-09 65.9 155 28.4
Gohir.A11G213300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.3e-09 65.5 144 27.8
Manes.10G086000 Manihot esculenta HOM05D001896 ORTHO05D001862 4.3e-09 65.5 154 34.4
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 4.3e-09 65.5 159 29.6
Cpa.g.c26343.5 Carica papaya HOM05D001896 ORTHO05D001862 5.6e-09 65.1 185 27.6
Eucgr.L02595 Eucalyptus grandis HOM05D001896 ORTHO05D001862 5.6e-09 65.1 158 29.1
Glyma.05G107000 Glycine max HOM05D001896 ORTHO05D001862 7.3e-09 64.7 152 28.3
Solyc02g092190.1 Solanum lycopersicum HOM05D001896 ORTHO05D001862 7.3e-09 64.7 147 33.3
Sopen02g036760 Solanum pennellii HOM05D001896 ORTHO05D001862 7.3e-09 64.7 147 33.3
SGA_v2.0_scaffold152G36823 Striga asiatica HOM05D001896 ORTHO05D001862 7.3e-09 64.7 161 31.7
Cfa013755 Carpinus fangiana HOM05D001896 ORTHO05D001862 1.2e-08 63.9 164 29.9
Manes.10G086100 Manihot esculenta HOM05D001896 ORTHO05D001862 1.2e-08 63.9 138 33.3
Oeu048568.1 Olea europaea HOM05D001896 ORTHO05D001862 1.2e-08 63.9 162 29.0
MELO3C010793.2 Cucumis melo HOM05D001896 ORTHO05D001862 1.6e-08 63.5 152 27.0
Ciclev10030311m.g Citrus clementina HOM05D001896 ORTHO05D001862 2.1e-08 63.2 148 28.4
Phvul.003G233900 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 2.1e-08 63.2 153 28.8
Psat4g227240 Pisum sativum HOM05D015234 ORTHO05D016919 2.1e-08 63.2 170 30.0
FAN23G2360 Fragaria x ananassa HOM05D001896 ORTHO05D001862 2.8e-08 62.8 157 28.0
FAN26G2644 Fragaria x ananassa HOM05D001896 ORTHO05D001862 2.8e-08 62.8 157 28.0
FAN27G2593 Fragaria x ananassa HOM05D000371 ORTHO05D001484 2.8e-08 62.8 171 31.6
PGSC0003DMG400021411 Solanum tuberosum HOM05D001896 ORTHO05D001862 2.8e-08 62.8 153 31.4
Gohir.A03G181250 Gossypium hirsutum HOM05D001896 ORTHO05D001862 3.6e-08 62.4 136 30.9
Sabra07G0004400 Salix brachista HOM05D001896 ORTHO05D001862 3.6e-08 62.4 167 28.7
CsaV3_2G026000 Cucumis sativus L. HOM05D001896 ORTHO05D001862 4.7e-08 62.0 152 27.0
MD08G1080000 Malus domestica HOM05D001896 ORTHO05D001862 4.7e-08 62.0 176 30.7
Manes.13G110000 Manihot esculenta HOM05D001896 ORTHO05D001862 4.7e-08 62.0 161 30.4
FAN20G2517 Fragaria x ananassa HOM05D001896 ORTHO05D001862 6.2e-08 61.6 171 31.6
Potri.009G085900 Populus trichocarpa HOM05D001896 ORTHO05D037395 6.2e-08 61.6 73 42.5
Prupe.1G420800 Prunus persica HOM05D001896 ORTHO05D001862 6.2e-08 61.6 167 29.3
Actinidia32848 Actinidia chinensis HOM05D001896 ORTHO05D001862 8.1e-08 61.2 158 26.6
Ciclev10029661m.g Citrus clementina HOM05D001896 ORTHO05D001862 8.1e-08 61.2 99 38.4
Duzib116G0259 Durio zibethinus HOM05D001896 ORTHO05D001862 8.1e-08 61.2 154 29.9
FvH4_1g17980 Fragaria vesca HOM05D001896 ORTHO05D001862 1.1e-07 60.8 157 27.4
FAN19G1457 Fragaria x ananassa HOM05D001896 ORTHO05D001862 1.1e-07 60.8 157 27.4
Gorai.005G230100 Gossypium raimondii HOM05D001896 ORTHO05D001862 1.1e-07 60.8 136 30.1
Ciclev10029578m.g Citrus clementina HOM05D001896 ORTHO05D001862 1.4e-07 60.5 146 33.6
FvH4_2g32830 Fragaria vesca HOM05D001896 ORTHO05D001862 1.4e-07 60.5 171 30.4
FAN24G0761 Fragaria x ananassa HOM05D000371 ORTHO05D001484 1.4e-07 60.5 171 30.4
Gohir.D02G203218 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.4e-07 60.5 136 30.1
Potri.007G006100 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.4e-07 60.5 161 28.0
TWI12G1251 Tripterygium wilfordii HOM05D001896 ORTHO05D001862 1.4e-07 60.5 150 30.7
CiPaw.07G173200 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.8e-07 60.1 156 29.5
ClCG08G016610 Citrullus lanatus HOM05D001896 ORTHO05D001862 1.8e-07 60.1 142 25.4
Sed0003560 Sechium edule HOM05D001896 ORTHO05D001862 1.8e-07 60.1 143 26.6
Sabra14G0006000 Salix brachista HOM05D001896 ORTHO05D001862 3.1e-07 59.3 155 28.4
CiPaw.08G051100 Carya illinoinensis HOM05D001896 ORTHO05D001862 4.0e-07 58.9 153 29.4
DCAR_008863 Daucus carota HOM05D001896 ORTHO05D001862 4.0e-07 58.9 194 28.9
Dinv44941 Davidia involucrata HOM05D001896 ORTHO05D001862 5.2e-07 58.5 176 27.8
Gohir.A05G211200 Gossypium hirsutum HOM05D001896 ORTHO05D001862 5.2e-07 58.5 160 28.1
Oeu053629.1 Olea europaea HOM05D001896 ORTHO05D001862 5.2e-07 58.5 168 30.4
TPR.G33724 Trifolium pratense HOM05D001896 ORTHO05D001862 5.2e-07 58.5 160 28.8
Aa31LG2G10650 Aethionema arabicum HOM05D001896 ORTHO05D001862 6.8e-07 58.2 160 29.4
Gohir.D05G214500 Gossypium hirsutum HOM05D001896 ORTHO05D001862 8.9e-07 57.8 153 29.4
Medtr4g097260 Medicago truncatula HOM05D001896 ORTHO05D001862 8.9e-07 57.8 161 26.1
Manes.05G182700 Manihot esculenta HOM05D001896 ORTHO05D001862 1.2e-06 57.4 157 27.4
PSO170G5938 Papaver somniferum HOM05D001896 ORTHO05D001862 1.2e-06 57.4 164 29.3
RcHm_v2.0_Chr6g0309871 Rosa chinensis HOM05D001896 ORTHO05D001862 1.2e-06 57.4 164 28.7
Lj4P164T35 Lonicera japonica HOM05D001896 ORTHO05D001862 1.5e-06 57.0 157 25.5
DCAR_021946 Daucus carota HOM05D001896 ORTHO05D001862 2.0e-06 56.6 153 30.7
Potri.014G014500 Populus trichocarpa HOM05D001896 ORTHO05D001862 2.0e-06 56.6 164 26.2
PGSC0003DMG400044830 Solanum tuberosum HOM05D001896 ORTHO05D001862 2.6e-06 56.2 149 30.9
CANSAT25G3829 Cannabis sativa HOM05D001896 ORTHO05D001862 3.4e-06 55.8 173 28.3
Gorai.009G221200 Gossypium raimondii HOM05D001896 ORTHO05D001862 3.4e-06 55.8 154 28.6
Lalb_Chr23g0267571 Lupinus albus HOM05D001896 ORTHO05D001862 3.4e-06 55.8 149 28.9
Eucgr.F00091 Eucalyptus grandis HOM05D001896 ORTHO05D001862 4.4e-06 55.5 171 28.7
Nitab4.5_0010576g0010 Nicotiana tabacum HOM05D001896 ORTHO05D001862 4.4e-06 55.5 163 31.9
Oeu037286.1 Olea europaea HOM05D026127 ORTHO05D029209 4.4e-06 55.5 107 37.4
Lj4g0024702 Lotus japonicus HOM05D001896 ORTHO05D001862 5.8e-06 55.1 136 25.7
QL12p038359 Quercus lobata HOM05D001896 ORTHO05D001862 5.8e-06 55.1 162 27.8
Glyma.06G047600 Glycine max HOM05D001896 ORTHO05D001862 7.6e-06 54.7 162 29.0
Manes.18G048000 Manihot esculenta HOM05D001896 ORTHO05D001862 7.6e-06 54.7 157 26.8
PSO017G0117 Papaver somniferum HOM05D001896 ORTHO05D001862 7.6e-06 54.7 164 28.7
TPR.G24259 Trifolium pratense HOM05D001896 ORTHO05D001862 7.6e-06 54.7 153 26.8
DCAR_012821 Daucus carota HOM05D001896 ORTHO05D001862 9.9e-06 54.3 189 25.4
TWI56G0236 Tripterygium wilfordii HOM05D001896 ORTHO05D001862 9.9e-06 54.3 168 27.4


User provided reference genes

Program Settings