Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 8.6e-61 236.9 126 100.0
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 6.6e-37 157.5 126 65.9
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 2.2e-32 142.5 128 63.3
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.6e-30 136.3 126 64.3
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 3.5e-30 135.2 130 57.7
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 4.6e-30 134.8 126 62.7
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 7.8e-30 134.0 128 58.6
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.0e-29 133.7 127 59.1
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.7e-29 132.9 127 57.5
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.7e-29 132.9 126 61.1
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.3e-29 132.5 127 59.1
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.3e-29 132.5 127 59.1
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.3e-29 132.5 127 59.1
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.0e-29 132.1 127 59.1
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 3.0e-29 132.1 113 61.9
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 3.0e-29 132.1 128 60.2
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 3.9e-29 131.7 115 63.5
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 8.6e-29 130.6 105 66.7
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.1e-28 130.2 108 64.8
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.1e-28 130.2 99 66.7
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 2.5e-28 129.0 92 67.4
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 3.3e-28 128.6 107 64.5
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 3.3e-28 128.6 128 57.8
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 3.3e-28 128.6 129 55.8
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 4.3e-28 128.3 84 75.0
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.3e-28 128.3 83 75.9
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 4.3e-28 128.3 128 58.6
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 5.6e-28 127.9 100 63.0
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 7.3e-28 127.5 83 74.7
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 7.3e-28 127.5 96 68.8
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 7.3e-28 127.5 96 68.8
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 9.6e-28 127.1 114 62.3
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 9.6e-28 127.1 82 75.6
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.2e-27 126.7 83 74.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.2e-27 126.7 83 74.7
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 1.2e-27 126.7 83 74.7
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.2e-27 126.7 83 74.7
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 1.2e-27 126.7 83 74.7
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 1.2e-27 126.7 83 74.7
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.6e-27 126.3 82 74.4
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.1e-27 125.9 127 57.5
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 2.1e-27 125.9 83 74.7
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.8e-27 125.6 83 73.5
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 2.8e-27 125.6 84 72.6
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 2.8e-27 125.6 65 90.8
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.8e-27 125.6 125 56.0
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 3.6e-27 125.2 129 55.0
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 3.6e-27 125.2 102 66.7
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 3.6e-27 125.2 108 64.8
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 3.6e-27 125.2 66 87.9
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 3.6e-27 125.2 106 60.4
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 3.6e-27 125.2 66 87.9
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 4.7e-27 124.8 65 90.8
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 6.2e-27 124.4 100 69.0
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 6.2e-27 124.4 66 87.9
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 6.2e-27 124.4 127 54.3
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 6.2e-27 124.4 88 68.2
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.1e-26 123.6 85 71.8
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.1e-26 123.6 102 62.7
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.1e-26 123.6 111 62.2
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.4e-26 123.2 88 71.6
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 1.8e-26 122.9 89 67.4
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.8e-26 122.9 88 69.3
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.8e-26 122.9 98 60.2
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.4e-26 122.5 83 72.3
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 2.4e-26 122.5 127 55.1
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 3.1e-26 122.1 66 86.4
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 4.0e-26 121.7 107 63.6
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 4.0e-26 121.7 65 84.6
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 5.2e-26 121.3 126 57.9
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 6.8e-26 120.9 107 59.8
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 6.8e-26 120.9 105 63.8
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 8.9e-26 120.6 65 84.6
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 8.9e-26 120.6 126 54.8
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.2e-25 120.2 102 60.8
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.2e-25 120.2 96 61.5
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.5e-25 119.8 84 70.2
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 2.0e-25 119.4 83 78.3
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 2.0e-25 119.4 80 73.8
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 3.4e-25 118.6 123 56.1
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 4.4e-25 118.2 126 47.6
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 5.8e-25 117.9 65 84.6
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 1.7e-24 116.3 64 79.7
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 2.9e-24 115.5 61 86.9
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 6.4e-24 114.4 65 81.5
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.4e-23 113.2 84 66.7
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 2.4e-23 112.5 58 86.2
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 2.1e-22 109.4 100 54.0
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 4.6e-22 108.2 54 92.6
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 3.0e-21 105.5 52 90.4
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 5.1e-21 104.8 62 72.6
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 5.6e-20 101.3 171 40.4
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 3.6e-19 98.6 48 89.6
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 4.8e-19 98.2 49 89.8
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 8.4e-16 87.4 57 68.4
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 1.6e-14 83.2 52 71.2
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 3.9e-13 78.6 52 71.2
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.3e-08 63.5 99 39.4


User provided reference genes

Program Settings