Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 4.6e-89 331.3 173 100.0
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.5e-68 263.1 173 76.3
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 2.5e-63 245.7 165 73.9
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 4.8e-62 241.5 173 68.2
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 6.2e-62 241.1 173 70.5
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 1.2e-60 236.9 173 67.6
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.6e-60 235.7 162 71.6
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 2.6e-60 235.7 162 71.6
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 4.5e-60 235.0 173 67.6
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 7.6e-60 234.2 173 65.9
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 4.9e-59 231.5 172 67.4
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 4.9e-59 231.5 156 73.7
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 8.4e-59 230.7 176 65.3
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.4e-58 229.9 165 68.5
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 1.4e-58 229.9 173 65.9
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 4.2e-58 228.4 172 66.9
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 7.1e-58 227.6 172 66.9
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 9.3e-58 227.3 175 64.0
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 1.6e-57 226.5 169 67.5
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 2.1e-57 226.1 173 63.0
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 1.3e-56 223.4 166 66.9
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 5.1e-56 221.5 157 68.8
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 8.7e-56 220.7 161 65.8
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 8.7e-56 220.7 157 68.8
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 1.5e-55 219.9 166 64.5
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 1.5e-55 219.9 166 63.9
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 2.5e-55 219.2 173 63.0
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 4.3e-55 218.4 171 61.4
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 5.7e-55 218.0 169 63.9
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 5.7e-55 218.0 169 63.9
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 2.1e-54 216.1 154 67.5
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 2.1e-54 216.1 175 65.7
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 3.7e-54 215.3 169 63.3
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 4.8e-54 214.9 165 64.2
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 4.8e-54 214.9 168 65.5
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 8.2e-54 214.2 173 64.7
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 1.1e-53 213.8 161 64.6
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.4e-53 213.4 156 67.3
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 1.4e-53 213.4 156 67.9
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.4e-53 213.4 172 63.4
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 1.4e-53 213.4 176 64.2
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 2.4e-53 212.6 161 63.4
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 3.1e-53 212.2 173 63.0
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 3.1e-53 212.2 171 63.2
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 4.1e-53 211.8 175 61.1
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 4.1e-53 211.8 176 64.8
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 5.3e-53 211.5 156 64.7
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 5.3e-53 211.5 161 62.7
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 2.0e-52 209.5 165 63.6
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 2.0e-52 209.5 163 67.5
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 2.6e-52 209.1 173 63.0
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 5.8e-52 208.0 175 61.7
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 7.6e-52 207.6 170 62.4
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.0e-51 207.2 178 62.4
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-51 207.2 176 59.7
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 1.0e-51 207.2 176 63.6
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 1.3e-51 206.8 162 62.3
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 1.3e-51 206.8 176 62.5
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 1.3e-51 206.8 168 63.1
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 1.7e-51 206.5 173 57.2
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 2.9e-51 205.7 140 73.6
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 3.8e-51 205.3 173 57.8
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 3.8e-51 205.3 178 61.8
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 5.0e-51 204.9 161 61.5
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 6.5e-51 204.5 174 60.3
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 8.4e-51 204.1 176 58.5
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 1.1e-50 203.8 161 60.9
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 1.1e-50 203.8 154 62.3
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 1.4e-50 203.4 154 62.3
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 1.4e-50 203.4 154 62.3
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.9e-50 203.0 160 62.5
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 1.9e-50 203.0 160 62.5
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 1.9e-50 203.0 174 62.1
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.5e-50 202.6 172 62.8
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.5e-50 202.6 168 62.5
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 4.2e-50 201.8 174 58.0
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 7.1e-50 201.1 173 60.7
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 7.1e-50 201.1 145 69.0
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.2e-49 200.3 157 62.4
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.1e-49 199.5 154 66.9
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 2.7e-49 199.1 174 61.5
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 1.0e-48 197.2 175 60.6
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 1.3e-48 196.8 163 61.3
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 2.3e-48 196.1 170 60.0
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 3.9e-48 195.3 145 69.7
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 5.1e-48 194.9 156 62.8
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 6.7e-48 194.5 141 66.0
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 1.9e-47 193.0 156 60.9
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 1.9e-47 193.0 199 52.3
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 5.7e-47 191.4 165 60.6
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 1.3e-46 190.3 174 58.6
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 1.6e-46 189.9 173 61.3
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 2.8e-46 189.1 163 58.3
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 4.8e-46 188.3 237 47.7
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 2.4e-45 186.0 159 60.4
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 9.0e-45 184.1 175 56.6
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.2e-44 183.7 152 63.2
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 1.5e-44 183.3 165 55.8
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 2.9e-43 179.1 146 65.1
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 6.5e-43 177.9 184 54.3
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 8.5e-43 177.6 141 63.8
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 8.5e-43 177.6 144 59.7
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 4.2e-42 175.3 137 64.2
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 7.9e-41 171.0 139 63.3
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 1.8e-40 169.9 148 60.1
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 3.9e-40 168.7 158 55.1
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 3.3e-39 165.6 137 61.3
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 1.3e-38 163.7 159 56.0
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 4.8e-38 161.8 108 71.3
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 2.7e-33 146.0 133 59.4
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 1.5e-31 140.2 110 67.3
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.0e-31 139.8 86 75.6
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 4.4e-31 138.7 104 67.3
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 9.1e-29 131.0 77 79.2
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.5e-28 130.2 90 68.9
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.5e-28 130.2 126 60.3
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 1.9e-26 123.2 135 45.9
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 3.6e-25 119.0 115 56.5
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 1.1e-23 114.0 130 45.4
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 2.0e-23 113.2 84 65.5
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 5.9e-20 101.7 66 69.7
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 3.8e-19 99.0 124 49.2
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 5.5e-18 95.1 54 81.5
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 9.4e-18 94.4 83 61.4
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.4e-16 90.5 70 64.3
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.4e-16 90.5 70 64.3
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.2e-15 87.4 50 80.0
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 2.2e-14 83.2 56 73.2
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 3.7e-14 82.4 52 71.2
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 8.5e-11 71.2 85 35.3
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.9e-10 70.1 53 56.6


User provided reference genes

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