Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01277 Erythranthe guttata HOM05D006736 ORTHO05D008459 3.5e-65 251.5 131 100.0
SGA_v2.0_scaffold49G18393 Striga asiatica HOM05D006736 ORTHO05D008459 6.3e-14 81.3 114 51.8
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 3.4e-12 75.5 101 51.5
Hma1.2p1_0599F.1_g186970 Hydrangea macrophylla HOM05D006736 ORTHO05D008459 1.0e-11 73.9 72 62.5
Peaxi162Scf00047g02119 Petunia axillaris HOM05D006736 ORTHO05D008459 1.7e-11 73.2 80 56.2
Solyc12g006220.3 Solanum lycopersicum HOM05D006736 ORTHO05D008459 8.4e-11 70.9 74 56.8
Sopen12g002170 Solanum pennellii HOM05D006736 ORTHO05D008459 8.4e-11 70.9 74 56.8
CSS0010283 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 4.2e-10 68.6 69 55.1
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 4.2e-10 68.6 63 65.1
Sopen07g023750 Solanum pennellii HOM05D006736 ORTHO05D008459 5.5e-10 68.2 72 54.2
Peaxi162Scf01164g00020 Petunia axillaris HOM05D006736 ORTHO05D008459 9.3e-10 67.4 92 48.9
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 1.2e-09 67.0 67 61.2
SGA_v2.0_scaffold73G24482 Striga asiatica HOM05D002257 ORTHO05D002417 4.6e-09 65.1 98 52.0
Sp3g11420 Schrenkiella parvula HOM05D006736 ORTHO05D008459 7.9e-09 64.3 68 55.9
Solyc07g045200.1 Solanum lycopersicum HOM05D006736 ORTHO05D008459 1.3e-08 63.5 58 58.6
Lalb_Chr20g0114121 Lupinus albus HOM05D006736 ORTHO05D008459 3.9e-08 62.0 68 55.9
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 5.1e-08 61.6 75 46.7
AT3G13227 Arabidopsis thaliana HOM05D006736 ORTHO05D008459 6.7e-08 61.2 59 59.3
BcaB06g25478 Brassica carinata HOM05D006736 ORTHO05D008459 6.7e-08 61.2 58 58.6
BcaC05g29199 Brassica carinata HOM05D006736 ORTHO05D008459 6.7e-08 61.2 58 58.6
BolC5t34141H Brassica oleracea HOM05D006736 ORTHO05D008459 6.7e-08 61.2 58 58.6
CARHR087850 Cardamine hirsuta HOM05D006736 ORTHO05D008459 6.7e-08 61.2 59 59.3
Thhalv10021795m.g Eutrema salsugineum HOM05D006736 ORTHO05D008459 6.7e-08 61.2 54 63.0
AL3G25020 Arabidopsis lyrata HOM05D006736 ORTHO05D008459 1.1e-07 60.5 58 58.6
Sc03g0011540 Simmondsia chinensis HOM05D006736 ORTHO05D008459 1.9e-07 59.7 52 67.3
MD03G1035000 Malus domestica HOM05D006736 ORTHO05D008459 2.5e-07 59.3 59 59.3
Carub.0003s1260 Capsella rubella HOM05D006736 ORTHO05D008459 3.3e-07 58.9 59 55.9
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 3.3e-07 58.9 74 44.6
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 3.3e-07 58.9 76 47.4
Psat5g166560 Pisum sativum HOM05D006736 ORTHO05D008459 3.3e-07 58.9 71 47.9
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 3.3e-07 58.9 78 50.0
Aa31LG8G450 Aethionema arabicum HOM05D006736 ORTHO05D008459 4.3e-07 58.5 67 50.7
COL.COLO4_07740 Corchorus olitorius HOM05D006736 ORTHO05D008459 4.3e-07 58.5 94 44.7
Glyma.14G011700 Glycine max HOM05D006736 ORTHO05D008459 5.7e-07 58.2 66 48.5
Prupe.6G028200 Prunus persica HOM05D006736 ORTHO05D008459 5.7e-07 58.2 64 51.6
Atru.chr2.3834 Acer truncatum HOM05D006736 ORTHO05D008459 7.4e-07 57.8 62 61.3
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 7.4e-07 57.8 75 44.0
PGR083G0815 Punica granatum HOM05D006736 ORTHO05D008459 7.4e-07 57.8 48 66.7
CSS0024852 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 9.7e-07 57.4 71 53.5
CSS0048788 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 9.7e-07 57.4 71 53.5
BcaC01g04005 Brassica carinata HOM05D006736 ORTHO05D008459 1.3e-06 57.0 48 62.5
A03p38090 Brassica napus HOM05D006736 ORTHO05D008459 1.3e-06 57.0 48 62.5
C03p46220 Brassica napus HOM05D006736 ORTHO05D008459 1.3e-06 57.0 48 62.5
BolC3t16893H Brassica oleracea HOM05D006736 ORTHO05D008459 1.3e-06 57.0 48 62.5
BraA03t12962Z Brassica rapa HOM05D006736 ORTHO05D008459 1.3e-06 57.0 48 62.5
CsaV3_7G023850 Cucumis sativus L. HOM05D006736 ORTHO05D008459 1.3e-06 57.0 68 52.9
DCAR_008749 Daucus carota HOM05D006736 ORTHO05D008459 1.3e-06 57.0 74 45.9
Medtr3g461010 Medicago truncatula HOM05D006736 ORTHO05D008459 1.3e-06 57.0 78 55.1
Potri.001G371400 Populus trichocarpa HOM05D006736 ORTHO05D008459 1.3e-06 57.0 68 51.5
Sabra16G0244100 Salix brachista HOM05D006736 ORTHO05D008459 1.3e-06 57.0 79 50.6
Cpa.g.sc12.109 Carica papaya HOM05D006736 ORTHO05D008459 1.6e-06 56.6 67 55.2
Lalb_Chr15g0082301 Lupinus albus HOM05D006736 ORTHO05D008459 1.6e-06 56.6 71 52.1
MBI14_g39127_MAGBIO Magnolia biondii HOM05D006736 ORTHO05D008459 3.7e-06 55.5 71 47.9
TWI39G1297 Tripterygium wilfordii HOM05D006736 ORTHO05D008459 3.7e-06 55.5 64 53.1
BcaB04g18747 Brassica carinata HOM05D006736 ORTHO05D008459 4.8e-06 55.1 69 52.2
ClCG09G021530 Citrullus lanatus HOM05D006736 ORTHO05D008459 4.8e-06 55.1 74 48.6
TPR.G17947 Trifolium pratense HOM05D006736 ORTHO05D008459 4.8e-06 55.1 73 50.7
Ah.06g181490 Amaranthus hybridus HOM05D006736 ORTHO05D008459 6.3e-06 54.7 57 59.6
FvH4_3g42280 Fragaria vesca HOM05D006736 ORTHO05D008459 6.3e-06 54.7 58 58.6
FAN11G0661 Fragaria x ananassa HOM05D006736 ORTHO05D008459 6.3e-06 54.7 58 58.6
FAN16G2066 Fragaria x ananassa HOM05D002691 ORTHO05D003304 6.3e-06 54.7 58 58.6
FAN21G1732 Fragaria x ananassa HOM05D006736 ORTHO05D008459 6.3e-06 54.7 58 58.6
FAN25G3397 Fragaria x ananassa HOM05D006736 ORTHO05D008459 6.3e-06 54.7 58 58.6
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 6.3e-06 54.7 76 44.7
Lsat_1_v5_gn_5_122340 Lactuca sativa HOM05D006736 ORTHO05D008459 6.3e-06 54.7 61 47.5
Manes.05G200400 Manihot esculenta HOM05D006736 ORTHO05D008459 6.3e-06 54.7 64 54.7
EL10Ac4g07540 Beta vulgaris HOM05D006736 ORTHO05D008459 8.2e-06 54.3 91 44.0
Phvul.008G281200 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 8.2e-06 54.3 71 46.5
QL08p003180 Quercus lobata HOM05D006736 ORTHO05D008459 8.2e-06 54.3 65 52.3


User provided reference genes

Program Settings