Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 1.1e-90 336.7 171 100.0
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 8.4e-35 151.0 139 61.2
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.1e-31 140.6 150 50.7
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 2.5e-31 139.4 150 50.7
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.3e-31 139.0 150 51.3
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 5.6e-31 138.3 155 52.9
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 3.4e-28 129.0 153 49.7
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 9.9e-28 127.5 153 48.4
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.0e-24 117.5 151 45.0
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 1.8e-24 116.7 117 55.6
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.6e-22 110.2 149 49.0
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.1e-22 109.8 182 40.7
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.1e-22 109.8 182 40.7
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 2.1e-22 109.8 152 46.7
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 3.1e-21 105.9 151 41.1
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.9e-21 104.8 153 41.8
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.2e-20 104.0 157 43.9
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.2e-20 104.0 157 43.9
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 5.8e-20 101.7 157 43.3
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 1.3e-19 100.5 159 39.6
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 1.7e-19 100.1 155 42.6
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 2.2e-19 99.8 154 43.5
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 2.2e-19 99.8 153 43.1
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 8.4e-19 97.8 121 46.3
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 8.4e-19 97.8 148 41.2
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.1e-18 97.4 157 44.6
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.4e-18 97.1 182 39.6
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.9e-18 96.7 150 41.3
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 2.5e-18 96.3 152 41.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 3.2e-18 95.9 154 42.2
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 4.2e-18 95.5 150 42.0
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 5.5e-18 95.1 153 41.2
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 5.5e-18 95.1 153 43.1
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 9.3e-18 94.4 152 40.8
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 2.1e-17 93.2 161 38.5
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.1e-17 93.2 159 39.6
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.1e-17 93.2 159 39.6
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 3.5e-17 92.4 150 38.0
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.5e-17 92.4 152 41.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 4.6e-17 92.0 145 41.4
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 4.6e-17 92.0 177 40.7
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 1.3e-16 90.5 189 38.1
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.8e-16 90.1 154 40.9
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.8e-16 90.1 142 41.5
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 3.0e-16 89.4 152 40.8
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 3.9e-16 89.0 157 38.9
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 3.9e-16 89.0 160 39.4
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 5.1e-16 88.6 151 41.1
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 6.7e-16 88.2 142 40.1
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 1.1e-15 87.4 142 41.5
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.1e-15 87.4 146 42.5
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 1.5e-15 87.0 144 40.3
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.9e-15 86.7 155 40.0
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 1.9e-15 86.7 155 36.8
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 2.5e-15 86.3 159 42.1
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 3.3e-15 85.9 162 35.2
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 3.3e-15 85.9 144 41.0
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 3.3e-15 85.9 155 41.9
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 3.3e-15 85.9 164 37.2
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 4.3e-15 85.5 182 36.8
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 4.3e-15 85.5 142 41.5
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 4.3e-15 85.5 152 41.4
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 5.7e-15 85.1 155 39.4
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 5.7e-15 85.1 160 40.0
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 7.4e-15 84.7 142 40.8
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 7.4e-15 84.7 154 40.9
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 1.3e-14 84.0 152 38.2
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.6e-14 83.6 152 42.1
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.6e-14 83.6 152 42.1
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.6e-14 83.6 152 42.1
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.6e-14 83.6 152 42.1
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.6e-14 83.6 162 41.4
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 2.1e-14 83.2 156 38.5
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 2.1e-14 83.2 149 38.3
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 2.1e-14 83.2 143 38.5
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 3.7e-14 82.4 158 38.6
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 3.7e-14 82.4 145 41.4
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 4.8e-14 82.0 153 38.6
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.1e-13 80.9 160 35.6
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.8e-13 80.1 140 40.0
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.8e-13 80.1 143 37.8
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 2.4e-13 79.7 162 38.3
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 3.1e-13 79.3 152 38.8
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 3.1e-13 79.3 155 37.4
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 4.1e-13 79.0 146 39.0
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 6.9e-13 78.2 157 38.9
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 9.0e-13 77.8 144 35.4
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.5e-12 77.0 164 37.2
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 2.0e-12 76.6 145 37.2
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 3.4e-12 75.9 159 35.8
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 3.4e-12 75.9 152 39.5
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 3.4e-12 75.9 155 37.4
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 4.5e-12 75.5 162 37.0
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 4.5e-12 75.5 162 37.0
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 4.5e-12 75.5 168 37.5
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 4.5e-12 75.5 146 35.6
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 5.8e-12 75.1 79 49.4
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 7.6e-12 74.7 162 37.0
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.7e-11 73.6 150 37.3
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.7e-11 73.6 40 82.5
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 2.2e-11 73.2 144 40.3
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 2.2e-11 73.2 117 43.6
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 2.9e-11 72.8 155 36.1
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 5.0e-11 72.0 164 34.1
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 6.5e-11 71.6 152 38.8
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.1e-10 70.9 137 38.7
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 1.4e-10 70.5 171 36.8
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 1.9e-10 70.1 157 34.4
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.5e-10 69.7 150 34.7
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 2.5e-10 69.7 142 37.3
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 5.5e-10 68.6 151 33.8
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 5.5e-10 68.6 161 32.9
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-09 67.4 155 32.3
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 2.1e-09 66.6 134 34.3
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 4.6e-09 65.5 72 50.0
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-08 63.9 39 76.9
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 3.0e-08 62.8 39 74.4
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 4.8e-06 55.5 157 33.8


User provided reference genes

Program Settings