Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 0.0e+00 1327.8 698 100.0
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 2.1e-294 1015.4 694 76.4
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 3.3e-279 964.9 683 74.7
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 1.2e-236 823.5 649 67.5
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 9.4e-226 787.3 700 60.7
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 1.8e-224 783.1 700 60.0
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 2.3e-224 782.7 686 61.1
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 3.0e-224 782.3 689 60.7
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 9.7e-223 777.3 618 64.4
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 7.0e-221 771.2 654 62.1
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 2.0e-220 769.6 696 59.1
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 6.5e-219 764.6 679 61.1
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 1.0e-216 757.3 682 60.4
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 1.4e-216 756.9 656 61.6
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 2.3e-216 756.1 693 58.3
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 6.8e-216 754.6 687 57.5
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 8.8e-216 754.2 698 58.6
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 7.5e-215 751.1 670 61.0
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 1.3e-214 750.4 692 58.2
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 2.2e-214 749.6 662 62.1
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 6.3e-214 748.0 695 59.0
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 2.4e-213 746.1 693 59.0
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 4.1e-213 745.3 669 60.1
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 5.4e-213 745.0 694 58.2
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 7.7e-212 741.1 693 59.7
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 7.7e-212 741.1 689 57.9
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 2.9e-211 739.2 688 58.0
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 5.0e-211 738.4 686 58.3
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 1.5e-210 736.9 684 58.9
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 2.5e-210 736.1 696 56.8
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 7.2e-210 734.6 665 59.8
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 1.0e-208 730.7 697 57.1
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 1.0e-208 730.7 619 64.6
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 3.0e-208 729.2 691 57.9
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 8.9e-208 727.6 695 57.3
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 8.3e-206 721.1 669 58.3
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 2.4e-205 719.5 671 57.8
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 9.2e-205 717.6 676 59.3
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.7e-204 716.1 706 57.1
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 1.0e-203 714.1 660 55.8
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 1.0e-203 714.1 699 55.5
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 1.0e-203 714.1 699 55.5
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 6.6e-203 711.4 681 55.4
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 8.6e-203 711.1 657 58.6
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 8.6e-203 711.1 696 56.5
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 8.6e-203 711.1 670 56.3
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 4.3e-202 708.8 698 57.4
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 4.3e-202 708.8 696 56.3
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 4.7e-201 705.3 695 57.3
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.0e-200 704.1 658 57.4
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 1.5e-199 700.3 666 57.4
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 5.8e-199 698.4 711 53.9
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 1.9e-197 693.3 699 55.7
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 2.4e-197 693.0 670 56.0
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 4.6e-196 688.7 675 55.4
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 1.7e-195 686.8 666 54.5
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.3e-195 686.4 656 57.2
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.9e-194 683.3 696 55.7
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 5.6e-194 681.8 637 56.5
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 9.5e-194 681.0 653 56.2
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 2.1e-193 679.9 707 53.0
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.8e-193 679.5 628 57.8
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 3.6e-193 679.1 698 53.2
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 8.0e-193 677.9 687 53.3
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 8.9e-192 674.5 616 58.1
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 3.4e-191 672.5 697 51.6
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 7.5e-191 671.4 683 52.0
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 9.8e-191 671.0 730 52.9
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 1.3e-190 670.6 734 53.1
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 2.2e-190 669.8 685 52.7
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 4.9e-190 668.7 741 52.1
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 4.9e-190 668.7 734 53.0
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 4.9e-190 668.7 587 60.8
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 8.3e-190 667.9 791 49.1
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 4.1e-189 665.6 687 54.4
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 2.1e-188 663.3 686 53.8
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 4.6e-188 662.1 694 52.9
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.7e-187 660.2 700 51.6
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 3.0e-187 659.4 646 56.7
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.1e-186 657.5 751 51.1
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 1.5e-186 657.1 763 50.5
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 2.5e-186 656.4 751 50.9
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 7.3e-186 654.8 700 51.6
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.6e-185 653.7 633 54.3
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 2.1e-185 653.3 698 51.4
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 3.6e-185 652.5 700 50.6
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 6.2e-185 651.7 714 49.3
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 1.4e-184 650.6 700 51.3
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 1.8e-184 650.2 707 49.5
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 1.8e-184 650.2 698 51.6
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 2.3e-184 649.8 659 52.8
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 4.0e-184 649.0 652 52.9
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 1.5e-183 647.1 675 52.9
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 9.9e-183 644.4 711 49.4
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 3.7e-182 642.5 685 52.0
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 6.4e-182 641.7 699 52.6
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 1.1e-181 641.0 677 53.5
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 1.9e-181 640.2 705 52.5
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 5.4e-181 638.6 695 52.5
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 1.2e-180 637.5 677 51.1
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 3.0e-179 632.9 647 54.1
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 3.9e-179 632.5 556 61.0
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 1.5e-178 630.6 626 56.4
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 3.3e-178 629.4 684 52.2
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 7.3e-178 628.2 706 52.1
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 8.1e-177 624.8 596 57.6
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 1.8e-176 623.6 700 47.9
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 5.2e-176 622.1 658 52.9
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 2.4e-173 613.2 733 50.1
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 1.6e-172 610.5 673 51.7
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 2.1e-172 610.1 706 48.9
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 8.1e-169 598.2 699 50.4
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 6.9e-168 595.1 670 49.3
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 2.0e-167 593.6 705 47.4
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 8.4e-166 588.2 679 49.2
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 1.6e-164 583.9 698 47.9
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 2.1e-164 583.6 678 48.8
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 3.6e-161 572.8 520 61.7
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 4.8e-161 572.4 702 47.0
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 1.1e-160 571.2 702 46.9
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.5e-159 567.4 648 48.6
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 3.2e-157 559.7 709 46.0
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 4.6e-156 555.8 637 49.1
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 4.6e-156 555.8 660 47.4
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 1.3e-155 554.3 669 47.2
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 1.3e-155 554.3 628 51.3
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 1.6e-153 547.4 676 46.9
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 8.4e-150 535.0 689 44.8
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 8.4e-150 535.0 716 45.5
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 7.6e-143 511.9 473 59.8
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.1e-138 498.0 484 54.3
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.9e-138 497.3 498 54.2
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 5.0e-126 456.1 678 43.1
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 3.9e-123 446.4 725 40.0
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.0e-118 431.8 670 42.1
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 3.7e-113 413.3 505 46.7
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 7.0e-112 409.1 420 55.2
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 3.6e-108 396.7 664 39.2
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 4.0e-107 393.3 649 38.5
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.3e-105 388.3 660 38.0
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 4.5e-103 379.8 650 38.2
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 4.5e-103 379.8 680 36.9
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 7.7e-103 379.0 392 53.1
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 1.1e-101 375.2 627 38.4
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 4.9e-97 359.8 661 38.3
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 9.2e-96 355.5 756 34.5
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 6.6e-94 349.4 729 34.8
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 1.5e-90 338.2 645 38.4
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 3.9e-86 323.6 800 32.2
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 4.7e-84 316.6 515 39.0
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 1.4e-80 305.1 524 37.4
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 1.2e-79 302.0 736 32.9
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 3.5e-79 300.4 364 47.0
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 4.7e-76 290.0 214 66.4
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 5.2e-75 286.6 524 36.6
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 6.8e-75 286.2 218 65.1
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 4.9e-73 280.0 314 50.6
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 3.2e-72 277.3 527 36.6
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.2e-68 263.1 526 33.5
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 1.3e-54 218.8 332 37.3
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.6e-34 151.4 262 35.1
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.4e-27 128.3 101 63.4
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 5.3e-27 127.1 191 40.8
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.5e-24 118.2 116 51.7
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.7e-22 110.2 109 55.0
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.2e-18 99.4 66 72.7
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 1.4e-16 92.4 70 65.7
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 2.7e-15 88.2 52 78.8
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 7.4e-13 80.1 151 37.1
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 1.7e-12 79.0 166 33.7
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 4.2e-08 64.3 54 53.7
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 1.4e-06 59.3 49 53.1


User provided reference genes

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