Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01199 Erythranthe guttata HOM05D005346 ORTHO05D007051 8.3e-51 203.4 100 100.0
Migut.E01266 Erythranthe guttata HOM05D005346 ORTHO05D007051 1.9e-42 175.6 96 90.6
Migut.E01045 Erythranthe guttata HOM05D005346 ORTHO05D007051 2.4e-42 175.3 96 89.6
MSTRG.25547 Avicennia marina HOM05D005346 ORTHO05D007051 7.3e-23 110.5 104 57.7
unitig_749.g13414 Utricularia gibba HOM05D005346 ORTHO05D007051 2.1e-22 109.0 96 57.3
SalBow6G4970 Salvia bowleyana HOM05D005346 ORTHO05D007051 9.0e-21 103.6 100 57.0
MSTRG.12059 Avicennia marina HOM05D005346 ORTHO05D007051 2.9e-19 98.6 94 59.6
Oeu016508.1 Olea europaea HOM05D005346 ORTHO05D007051 3.8e-19 98.2 97 51.5
SGA_v2.0_scaffold196G40944 Striga asiatica HOM05D005346 ORTHO05D007051 1.2e-17 93.2 96 55.2
SGA_v2.0_scaffold146G36182 Striga asiatica HOM05D005346 ORTHO05D007051 7.9e-17 90.5 103 53.4
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 6.2e-14 80.9 88 54.5
PGSC0003DMG400003934 Solanum tuberosum HOM05D005346 ORTHO05D007051 5.5e-10 67.8 107 43.0
Solyc08g079490.4 Solanum lycopersicum HOM05D005346 ORTHO05D007051 7.1e-10 67.4 107 43.9
Sopen08g027860 Solanum pennellii HOM05D005346 ORTHO05D007051 7.1e-10 67.4 107 43.0
CAN.G630.80 Capsicum annuum HOM05D005346 ORTHO05D007051 9.3e-10 67.0 104 42.3
SalBow1G0489 Salvia bowleyana HOM05D005346 ORTHO05D007051 3.5e-09 65.1 67 59.7
CSS0033087 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 1.3e-08 63.2 101 42.6
vmacro14041 Vaccinium macrocarpon HOM05D005346 ORTHO05D007051 6.7e-08 60.8 98 43.9
Dinv39076 Davidia involucrata HOM05D005346 ORTHO05D007051 8.7e-08 60.5 103 41.7
Actinidia02087 Actinidia chinensis HOM05D005346 ORTHO05D007051 1.5e-07 59.7 96 38.5
Peaxi162Scf00271g00130 Petunia axillaris HOM05D005346 ORTHO05D007051 1.5e-07 59.7 100 40.0
BcaC04g22452 Brassica carinata HOM05D005346 ORTHO05D007051 2.5e-07 58.9 55 52.7
A09p15920 Brassica napus HOM05D005346 ORTHO05D007051 2.5e-07 58.9 55 52.7
BraA09t37228Z Brassica rapa HOM05D005346 ORTHO05D007051 2.5e-07 58.9 55 52.7
C09p19170 Brassica napus HOM05D005346 ORTHO05D007051 3.3e-07 58.5 55 52.7
BolC9t54826H Brassica oleracea HOM05D005346 ORTHO05D007051 3.3e-07 58.5 55 52.7
CSS0010264 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 1.6e-06 56.2 96 38.5
CSS0047104 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 1.6e-06 56.2 96 38.5
DCAR_006800 Daucus carota HOM05D005346 ORTHO05D007051 1.6e-06 56.2 98 33.7
Nitab4.5_0003534g0100 Nicotiana tabacum HOM05D005346 ORTHO05D007051 1.6e-06 56.2 103 38.8
CARHR048890 Cardamine hirsuta HOM05D005346 ORTHO05D007051 6.2e-06 54.3 100 40.0
Eucgr.E00475 Eucalyptus grandis HOM05D005346 ORTHO05D007051 6.2e-06 54.3 94 43.6


User provided reference genes

Program Settings