Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01190 Erythranthe guttata HOM05D002915 ORTHO05D003004 3.4e-112 408.3 202 100.0
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.3e-100 369.0 236 80.5
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.4e-97 359.0 236 78.4
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 5.3e-97 357.8 234 78.6
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.9e-95 352.1 236 77.5
Migut.F00575 Erythranthe guttata HOM05D002915 ORTHO05D003004 5.2e-68 261.5 133 93.2
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 6.6e-39 164.9 227 41.0
SGA_v2.0_scaffold169G38697 Striga asiatica HOM05D002915 ORTHO05D003004 7.3e-38 161.4 219 40.6
Dinv28571 Davidia involucrata HOM05D002915 ORTHO05D003004 7.8e-32 141.4 170 44.7
SGA_v2.0_scaffold51G18778 Striga asiatica HOM05D002915 ORTHO05D003004 3.0e-31 139.4 192 39.1
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 7.6e-27 124.8 218 37.6
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.2e-25 119.0 223 34.1
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 7.1e-25 118.2 235 33.6
Cc08_g03020 Coffea canephora HOM05D002915 ORTHO05D003004 1.6e-24 117.1 217 36.4
Cc00_g21400 Coffea canephora HOM05D002915 ORTHO05D003004 2.7e-24 116.3 225 33.3
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 3.5e-24 115.9 222 33.3
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 1.1e-22 110.9 232 33.2
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 1.9e-22 110.2 224 32.6
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.4e-20 104.0 233 30.5
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 3.1e-20 102.8 225 32.4
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 4.0e-20 102.4 215 31.2
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 3.4e-19 99.4 233 30.0
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 3.4e-19 99.4 233 29.6
Sopen06g010910 Solanum pennellii HOM05D000025 ORTHO05D000136 1.0e-18 97.8 190 33.7
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 1.7e-18 97.1 242 26.0
PGSC0003DMG400043877 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.7e-18 97.1 219 29.7
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 2.2e-18 96.7 230 28.7
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 3.8e-18 95.9 217 30.9
CSS0048418 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 4.9e-18 95.5 143 37.1
SalBow8G4835 Salvia bowleyana HOM05D002915 ORTHO05D003004 1.1e-17 94.4 90 48.9
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-17 94.0 224 28.6
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 1.9e-17 93.6 216 28.7
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 2.5e-17 93.2 216 28.7
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 3.2e-17 92.8 240 28.3
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 3.2e-17 92.8 218 29.4
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 1.2e-16 90.9 220 29.1
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.6e-16 90.5 218 29.4
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.6e-16 90.5 232 31.0
Cc00_g09710 Coffea canephora HOM05D002915 ORTHO05D003004 2.7e-16 89.7 172 33.1
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 3.5e-16 89.4 218 31.2
PGSC0003DMG400043813 Solanum tuberosum HOM05D002915 ORTHO05D003004 3.5e-16 89.4 189 33.9
Glyma.07G247800 Glycine max HOM05D002915 ORTHO05D003004 6.0e-16 88.6 234 26.1
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.0e-15 87.8 218 28.0
Dinv28573 Davidia involucrata HOM05D002915 ORTHO05D003004 3.0e-15 86.3 106 48.1
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.0e-15 86.3 235 29.4
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 3.0e-15 86.3 230 27.0
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 3.9e-15 85.9 227 27.8
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 6.7e-15 85.1 238 26.5
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 8.7e-15 84.7 230 28.7
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.1e-14 84.3 228 29.4
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.1e-14 84.3 228 29.4
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 1.1e-14 84.3 168 31.5
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 3.3e-14 82.8 232 28.4
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 3.3e-14 82.8 243 26.7
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 3.3e-14 82.8 162 29.6
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 4.3e-14 82.4 240 26.2
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 5.7e-14 82.0 217 28.1
Thecc.03G155800 Theobroma cacao HOM05D002915 ORTHO05D003004 5.7e-14 82.0 133 36.8
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 7.4e-14 81.6 200 27.5
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 1.3e-13 80.9 230 28.3
HanXRQChr05g0131161 Helianthus annuus HOM05D002915 ORTHO05D003004 1.3e-13 80.9 128 37.5
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.6e-13 80.5 239 27.2
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 2.1e-13 80.1 229 26.6
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 2.1e-13 80.1 229 26.6
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 2.1e-13 80.1 220 26.8
Peaxi162Scf00072g00109 Petunia axillaris HOM05D000002 ORTHO05D003004 2.1e-13 80.1 118 39.8
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 2.8e-13 79.7 252 27.8
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 2.8e-13 79.7 234 26.1
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 3.7e-13 79.3 230 27.0
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 3.7e-13 79.3 213 25.8
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 3.7e-13 79.3 218 24.3
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 4.8e-13 79.0 242 26.4
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 4.8e-13 79.0 246 24.8
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 6.2e-13 78.6 240 25.4
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 8.2e-13 78.2 180 31.1
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 1.1e-12 77.8 215 26.0
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 1.4e-12 77.4 211 28.4
Lj3g0023229 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-12 77.4 225 26.7
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 1.4e-12 77.4 181 29.8
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 2.4e-12 76.6 217 27.2
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 2.4e-12 76.6 241 27.0
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 2.4e-12 76.6 230 28.7
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 2.4e-12 76.6 220 28.2
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 3.1e-12 76.3 218 27.5
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 3.1e-12 76.3 189 30.7
PGSC0003DMG400043755 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.1e-12 75.9 128 38.3
Ah.15g098230 Amaranthus hybridus HOM05D002915 ORTHO05D003004 5.3e-12 75.5 228 25.9
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 5.3e-12 75.5 173 27.2
Medtr3g075360 Medicago truncatula HOM05D002915 ORTHO05D003004 5.3e-12 75.5 245 26.1
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 9.0e-12 74.7 220 27.7
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 9.0e-12 74.7 220 26.4
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.2e-11 74.3 213 25.4
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 1.5e-11 73.9 242 24.8
Lj1g0000366 Lotus japonicus HOM05D002915 ORTHO05D003004 2.0e-11 73.6 206 26.2
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 2.0e-11 73.6 240 27.5
Lj3g0026757 Lotus japonicus HOM05D002915 ORTHO05D003004 2.6e-11 73.2 210 27.1
Lj5g0000576 Lotus japonicus HOM05D002915 ORTHO05D003004 4.5e-11 72.4 245 26.5
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 5.8e-11 72.0 249 26.1
Lj5g0020165 Lotus japonicus HOM05D002915 ORTHO05D003004 5.8e-11 72.0 225 27.1
Lj2g0021070 Lotus japonicus HOM05D002915 ORTHO05D003004 7.6e-11 71.6 214 27.1
CANSAT64G2697 Cannabis sativa HOM05D002915 ORTHO05D003004 1.0e-10 71.2 228 27.6
Ca_21504_v3 Cicer arietinum L. HOM05D002915 ORTHO05D003004 1.0e-10 71.2 242 27.3
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 1.0e-10 71.2 247 25.9
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.3e-10 70.9 123 35.8
Thecc.06G218700 Theobroma cacao HOM05D002915 ORTHO05D003004 1.3e-10 70.9 225 26.7
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 1.3e-10 70.9 238 25.2
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 1.7e-10 70.5 221 25.3
Lj5g0016376 Lotus japonicus HOM05D002915 ORTHO05D003004 1.7e-10 70.5 249 26.1
Glyma.17G083900 Glycine max HOM05D002915 ORTHO05D003004 2.2e-10 70.1 201 29.9
Lj6A815T43 Lonicera japonica HOM05D002915 ORTHO05D003004 2.2e-10 70.1 214 27.6
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 5.0e-10 68.9 204 28.4
MELO3C011803.2 Cucumis melo HOM05D002915 ORTHO05D003004 6.5e-10 68.6 232 26.3
CsaV3_5G029620 Cucumis sativus L. HOM05D002915 ORTHO05D003004 6.5e-10 68.6 217 24.0
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 8.4e-10 68.2 138 31.2
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 1.4e-09 67.4 238 24.4
Nn1g09544 Nelumbo nucifera HOM05D002915 ORTHO05D003004 1.4e-09 67.4 174 28.7
MELO3C029741.2 Cucumis melo HOM05D002915 ORTHO05D003004 1.9e-09 67.0 245 24.1
SalBow8G1873 Salvia bowleyana HOM05D002915 ORTHO05D003004 1.9e-09 67.0 62 58.1
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 2.5e-09 66.6 222 23.0
Duzib168G1329 Durio zibethinus HOM05D002915 ORTHO05D003004 3.2e-09 66.2 172 27.3
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 3.2e-09 66.2 242 24.0
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 3.2e-09 66.2 226 22.1
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 3.2e-09 66.2 226 22.1
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 5.5e-09 65.5 174 27.6
Lj4g0005635 Lotus japonicus HOM05D002915 ORTHO05D003004 5.5e-09 65.5 204 27.5
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 5.5e-09 65.5 230 25.2
PGSC0003DMG400012872 Solanum tuberosum HOM05D000002 ORTHO05D003004 5.5e-09 65.5 120 33.3
Thecc.03G155900 Theobroma cacao HOM05D002915 ORTHO05D003004 5.5e-09 65.5 100 43.0
Lj4g0013622 Lotus japonicus HOM05D002915 ORTHO05D003004 7.1e-09 65.1 204 27.0
Duzib168G1942 Durio zibethinus HOM05D002915 ORTHO05D003004 9.3e-09 64.7 172 26.2
Lj4g0001937 Lotus japonicus HOM05D002915 ORTHO05D003004 9.3e-09 64.7 204 27.0
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.2e-08 64.3 123 35.8
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.6e-08 63.9 172 26.7
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 2.7e-08 63.2 221 24.9
RcHm_v2.0_Chr4g0422141 Rosa chinensis HOM05D002915 ORTHO05D003004 2.7e-08 63.2 248 24.6
Solyc04g049540.4 Solanum lycopersicum HOM05D000002 ORTHO05D003004 2.7e-08 63.2 118 33.1
Cpa.g.sc3.322 Carica papaya HOM05D002915 ORTHO05D003004 3.5e-08 62.8 80 41.2
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 4.6e-08 62.4 187 24.1
MELO3C034049.2 Cucumis melo HOM05D002915 ORTHO05D003004 6.1e-08 62.0 232 25.4
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 6.1e-08 62.0 193 25.4
Gorai.009G177500 Gossypium raimondii HOM05D002915 ORTHO05D003004 1.0e-07 61.2 193 25.4
FAN07G0523 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.3e-07 60.8 100 39.0
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 1.3e-07 60.8 221 24.9
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 1.8e-07 60.5 232 25.9
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 2.3e-07 60.1 218 27.5
Glyma.17G026300 Glycine max HOM05D002915 ORTHO05D003004 2.3e-07 60.1 183 26.2
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 2.3e-07 60.1 245 21.6
Carub.0002s2166 Capsella rubella HOM05D002915 ORTHO05D003004 3.0e-07 59.7 199 28.6
Eucgr.H01273 Eucalyptus grandis HOM05D002915 ORTHO05D003004 3.0e-07 59.7 52 50.0
TAR374G0847 Trochodendron aralioides HOM05D002915 ORTHO05D003004 3.0e-07 59.7 96 35.4
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 3.9e-07 59.3 212 23.6
Medtr4g123430 Medicago truncatula HOM05D002915 ORTHO05D003004 6.7e-07 58.5 155 26.5
THA.LOC104810144 Tarenaya hassleriana HOM05D002915 ORTHO05D003004 1.1e-06 57.8 200 25.5
Lj6g0001752 Lotus japonicus HOM05D002915 ORTHO05D003004 1.5e-06 57.4 211 24.6
Psat0s6185g0040 Pisum sativum HOM05D002915 ORTHO05D003004 5.7e-06 55.5 279 20.8
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 7.4e-06 55.1 90 35.6
CAN.G853.27 Capsicum annuum HOM05D002915 ORTHO05D003004 9.7e-06 54.7 116 31.0


User provided reference genes

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