Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01126 Erythranthe guttata HOM05D007385 ORTHO05D009349 1.6e-255 885.6 436 100.0
Migut.L01399 Erythranthe guttata HOM05D007385 ORTHO05D009349 2.1e-82 310.5 195 80.0
Migut.H01128 Erythranthe guttata HOM05D007385 ORTHO05D009349 1.2e-69 268.1 175 76.6
MSTRG.11333 Avicennia marina HOM05D007385 ORTHO05D009349 1.9e-67 260.8 208 63.5
SalBow5G4421 Salvia bowleyana HOM05D007385 ORTHO05D009349 4.3e-67 259.6 191 66.0
SGA_v2.0_scaffold28G11738 Striga asiatica HOM05D007385 ORTHO05D009349 4.0e-57 226.5 165 65.5
SGA_v2.0_scaffold733G53530 Striga asiatica HOM05D007385 ORTHO05D009349 4.0e-57 226.5 165 65.5
FvH4_5g13630 Fragaria vesca HOM05D007385 ORTHO05D009349 7.6e-56 222.2 189 57.1
HanXRQChr08g0230411 Helianthus annuus HOM05D007385 ORTHO05D009349 7.6e-56 222.2 189 53.4
FAN13G1154 Fragaria x ananassa HOM05D007385 ORTHO05D009349 1.3e-55 221.5 189 57.7
Dinv22764 Davidia involucrata HOM05D007385 ORTHO05D009349 1.7e-55 221.1 188 55.9
RcHm_v2.0_Chr7g0183331 Rosa chinensis HOM05D007385 ORTHO05D009349 2.2e-55 220.7 189 57.1
QL10p019987 Quercus lobata HOM05D007385 ORTHO05D009349 2.9e-55 220.3 210 51.9
FAN18G0626 Fragaria x ananassa HOM05D007385 ORTHO05D009349 4.9e-55 219.5 189 57.1
Lj5E134T0 Lonicera japonica HOM05D007385 ORTHO05D009349 6.4e-55 219.2 188 56.9
Lsat_1_v5_gn_5_22980 Lactuca sativa HOM05D007385 ORTHO05D009349 1.1e-54 218.4 189 52.4
CSS0026709 Camellia sinensis var. sinensis HOM05D007385 ORTHO05D009349 1.9e-54 217.6 194 56.2
Manes.14G087500 Manihot esculenta HOM05D007385 ORTHO05D009349 1.9e-54 217.6 214 51.4
Potri.018G051600 Populus trichocarpa HOM05D007385 ORTHO05D009349 2.4e-54 217.2 191 53.9
Lsat_1_v5_gn_5_22940 Lactuca sativa HOM05D007385 ORTHO05D009349 7.1e-54 215.7 189 51.9
Cpa.g.sc94.76 Carica papaya HOM05D007385 ORTHO05D009349 1.6e-53 214.5 208 50.0
Gohir.D10G254100 Gossypium hirsutum HOM05D007385 ORTHO05D009349 2.7e-53 213.8 208 50.0
Thecc.04G178800 Theobroma cacao HOM05D007385 ORTHO05D009349 3.5e-53 213.4 208 50.0
Sabra18G0048200 Salix brachista HOM05D007385 ORTHO05D009349 4.6e-53 213.0 189 52.9
Rhsim02G0022600 Rhododendron simsii HOM05D007385 ORTHO05D009349 3.0e-52 210.3 189 55.0
Gorai.011G295100 Gossypium raimondii HOM05D007385 ORTHO05D009349 3.9e-52 209.9 208 49.0
CiPaw.11G055800 Carya illinoinensis HOM05D007385 ORTHO05D009349 5.1e-52 209.5 189 55.0
FAN08G0404 Fragaria x ananassa HOM05D007385 ORTHO05D009349 8.6e-52 208.8 198 53.5
Gohir.A10G242100 Gossypium hirsutum HOM05D007385 ORTHO05D009349 1.9e-51 207.6 208 49.0
COL.COLO4_07677 Corchorus olitorius HOM05D007385 ORTHO05D009349 3.3e-51 206.8 189 53.4
Cfa019356 Carpinus fangiana HOM05D007385 ORTHO05D009349 4.3e-51 206.5 191 53.9
Haze_07747 Corylus avellana HOM05D007385 ORTHO05D009349 4.3e-51 206.5 218 50.0
Migut.H01127 Erythranthe guttata HOM05D007385 ORTHO05D009349 7.3e-51 205.7 151 71.5
Hma1.2p1_0322F.1_g124600 Hydrangea macrophylla HOM05D007385 ORTHO05D009349 2.1e-50 204.1 191 56.0
Thhalv10018549m.g Eutrema salsugineum HOM05D007385 ORTHO05D009349 4.7e-50 203.0 208 46.6
Duzib212G0687 Durio zibethinus HOM05D007385 ORTHO05D009349 6.2e-50 202.6 184 53.8
BcaC08g46845 Brassica carinata HOM05D007385 ORTHO05D009349 8.1e-50 202.2 208 47.6
PGR083G1273 Punica granatum HOM05D007385 ORTHO05D009349 1.1e-49 201.8 208 47.6
Atru.chr9.516 Acer truncatum HOM05D007385 ORTHO05D009349 1.4e-49 201.4 263 42.2
Ca_29560_v3 Cicer arietinum L. HOM05D007385 ORTHO05D009349 3.1e-49 200.3 184 52.2
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 3.1e-49 200.3 213 48.4
A07p40010 Brassica napus HOM05D007385 ORTHO05D009349 4.0e-49 199.9 210 45.2
BraA07t31546Z Brassica rapa HOM05D007385 ORTHO05D009349 4.0e-49 199.9 210 45.2
AUR62021530 Chenopodium quinoa HOM05D007385 ORTHO05D009349 4.0e-49 199.9 208 48.6
SHI17456 Sapria himalayana HOM05D007385 ORTHO05D009349 4.0e-49 199.9 195 53.3
Nitab4.5_0000309g0300 Nicotiana tabacum HOM05D007385 ORTHO05D009349 6.8e-49 199.1 169 55.6
Peaxi162Scf00251g00117 Petunia axillaris HOM05D007385 ORTHO05D009349 6.8e-49 199.1 182 55.5
AT1G74120 Arabidopsis thaliana HOM05D007385 ORTHO05D009349 8.9e-49 198.7 185 51.4
AUR62039653 Chenopodium quinoa HOM05D007385 ORTHO05D009349 8.9e-49 198.7 208 47.1
Ciclev10020129m.g Citrus clementina HOM05D007385 ORTHO05D009349 8.9e-49 198.7 208 48.1
EL10Ac5g11161 Beta vulgaris HOM05D007385 ORTHO05D009349 1.2e-48 198.4 194 49.5
C06p48270 Brassica napus HOM05D007385 ORTHO05D009349 1.2e-48 198.4 210 45.2
Sopen09g035860 Solanum pennellii HOM05D007385 ORTHO05D009349 1.2e-48 198.4 181 51.4
BcaC08g46812 Brassica carinata HOM05D007385 ORTHO05D009349 1.5e-48 198.0 208 45.7
BolC6t39859H Brassica oleracea HOM05D007385 ORTHO05D009349 1.5e-48 198.0 208 45.7
TAR626G0510 Trochodendron aralioides HOM05D007385 ORTHO05D009349 1.5e-48 198.0 189 53.4
Carub.0002s2092 Capsella rubella HOM05D007385 ORTHO05D009349 2.0e-48 197.6 208 46.2
AL2G34030 Arabidopsis lyrata HOM05D007385 ORTHO05D009349 2.6e-48 197.2 210 46.2
Solyc09g097920.3 Solanum lycopersicum HOM05D007385 ORTHO05D009349 2.6e-48 197.2 181 50.8
CAN.G681.4 Capsicum annuum HOM05D007385 ORTHO05D009349 3.4e-48 196.8 181 53.0
Prupe.5G207400 Prunus persica HOM05D007385 ORTHO05D009349 5.8e-48 196.1 164 56.1
GSVIVG01008120001 Vitis vinifera HOM05D007385 ORTHO05D009349 9.9e-48 195.3 163 55.8
CARHR067280 Cardamine hirsuta HOM05D007385 ORTHO05D009349 2.2e-47 194.1 208 45.2
Medtr2g061450 Medicago truncatula HOM05D007385 ORTHO05D009349 2.2e-47 194.1 207 48.3
Psat1g128320 Pisum sativum HOM05D007385 ORTHO05D009349 2.2e-47 194.1 207 47.3
PGSC0003DMG400016606 Solanum tuberosum HOM05D007385 ORTHO05D009349 2.2e-47 194.1 169 52.1
Aa31LG4G4430 Aethionema arabicum HOM05D007385 ORTHO05D009349 2.9e-47 193.7 189 48.1
Actinidia04811 Actinidia chinensis HOM05D007385 ORTHO05D009349 8.4e-47 192.2 166 59.6
Sp5g29350 Schrenkiella parvula HOM05D007385 ORTHO05D009349 8.4e-47 192.2 208 44.7
MD14G1214100 Malus domestica HOM05D007385 ORTHO05D009349 1.1e-46 191.8 164 54.9
THA.LOC104812111 Tarenaya hassleriana HOM05D007385 ORTHO05D009349 1.4e-46 191.4 210 47.1
Nitab4.5_0000309g0070 Nicotiana tabacum HOM05D007385 ORTHO05D009349 1.9e-46 191.0 168 54.2
CANSAT78G0918 Cannabis sativa HOM05D007385 ORTHO05D009349 3.2e-46 190.3 164 53.7
Sed0022204 Sechium edule HOM05D007385 ORTHO05D009349 4.2e-46 189.9 207 44.9
Ah.01g002510 Amaranthus hybridus HOM05D007385 ORTHO05D009349 9.3e-46 188.7 189 47.1
Sc04g0004300 Simmondsia chinensis HOM05D007385 ORTHO05D009349 2.1e-45 187.6 189 48.1
ClCG03G008530 Citrullus lanatus HOM05D007385 ORTHO05D009349 2.7e-45 187.2 207 45.4
MELO3C002869.2 Cucumis melo HOM05D007385 ORTHO05D009349 2.7e-45 187.2 207 44.9
MBI16_g10855_MAGBIO Magnolia biondii HOM05D007385 ORTHO05D009349 2.7e-45 187.2 207 46.9
CsaV3_1G037600 Cucumis sativus L. HOM05D007385 ORTHO05D009349 3.5e-45 186.8 207 44.9
Lalb_Chr11g0068081 Lupinus albus HOM05D007385 ORTHO05D009349 1.0e-44 185.3 189 49.2
Aqoxy3G03653 Aquilegia oxysepala HOM05D007385 ORTHO05D009349 2.3e-44 184.1 196 49.0
Glyma.04G160400 Glycine max HOM05D007385 ORTHO05D009349 4.3e-43 179.9 188 46.8
arahy.Tifrunner.gnm1.ann1.AV1VK7 Arachis hypogaea HOM05D007385 ORTHO05D009349 7.3e-43 179.1 208 43.8
arahy.Tifrunner.gnm1.ann1.9FHV3M Arachis hypogaea HOM05D007385 ORTHO05D009349 6.2e-42 176.0 185 47.0
Phvul.009G202900 Phaseolus vulgaris HOM05D007385 ORTHO05D009349 6.2e-42 176.0 196 43.4
VMungo1309G0993 Vigna mungo HOM05D007385 ORTHO05D009349 1.8e-41 174.5 209 43.5
ECA246G0832 Erigeron canadensis HOM05D007385 ORTHO05D009349 6.9e-41 172.6 146 54.1
Lj2g0011212 Lotus japonicus HOM05D007385 ORTHO05D009349 1.7e-39 167.9 207 42.0
ATR0680G420 Amborella trichopoda HOM05D007385 ORTHO05D009349 6.0e-37 159.5 187 42.8
BcaC08g46816 Brassica carinata HOM05D007385 ORTHO05D009349 9.9e-32 142.1 144 48.6
HPP92_019471 Vanilla planifolia HOM05D007385 ORTHO05D009349 2.4e-30 137.5 210 39.0
Rhsim08G0143700 Rhododendron simsii HOM05D007385 ORTHO05D009349 9.3e-30 135.6 130 53.1
COL.COLO4_37709 Corchorus olitorius HOM05D007385 ORTHO05D009349 3.9e-28 130.2 189 39.7
Os12g0490000 Oryza sativa ssp. japonica HOM05D007385 ORTHO05D009349 1.3e-20 105.1 177 33.9
Zm00001eb136360 Zea mays HOM05D007385 ORTHO05D009349 3.3e-19 100.5 177 32.2
Nitab4.5_0001689g0090 Nicotiana tabacum HOM05D007385 ORTHO05D009349 6.3e-18 96.3 101 46.5
Medtr2g060620 Medicago truncatula HOM05D007385 ORTHO05D009349 1.0e-12 79.0 79 45.6
Oeu014423.1 Olea europaea HOM05D007385 ORTHO05D009349 8.7e-12 75.9 64 53.1
Migut.H01129 Erythranthe guttata HOM05D007385 ORTHO05D009349 2.5e-11 74.3 70 58.6
Actinidia10453 Actinidia chinensis HOM05D007385 ORTHO05D009349 7.4e-11 72.8 86 46.5
COL.COLO4_15958 Corchorus olitorius HOM05D003335 ORTHO05D003853 2.2e-10 71.2 324 25.3
Phvul.006G024200 Phaseolus vulgaris HOM05D000161 ORTHO05D000111 6.9e-09 66.2 191 23.6
Glyma.08G306100 Glycine max HOM05D000161 ORTHO05D000111 2.6e-08 64.3 304 21.4
Glyma.08G275900 Glycine max HOM05D000161 ORTHO05D000111 3.4e-08 63.9 240 21.2
Thhalv10013278m.g Eutrema salsugineum HOM05D003457 ORTHO05D009746 1.0e-07 62.4 317 21.1
Sp6g16240 Schrenkiella parvula HOM05D003457 ORTHO05D009746 1.0e-07 62.4 434 21.4
Ca_16778_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009746 1.3e-07 62.0 238 21.0
Glyma.18G112300 Glycine max HOM05D000161 ORTHO05D000111 5.0e-07 60.1 208 21.6
COL.COLO4_32241 Corchorus olitorius HOM05D004798 ORTHO05D005809 8.5e-07 59.3 184 23.4
Eucgr.K00030 Eucalyptus grandis HOM05D003457 ORTHO05D009746 1.1e-06 58.9 210 21.4
CANSAT80G0679 Cannabis sativa HOM05D004798 ORTHO05D005809 1.4e-06 58.5 159 22.0
Glyma.08G305300 Glycine max HOM05D000161 ORTHO05D000111 1.9e-06 58.2 245 21.6
Glyma.08G306000 Glycine max HOM05D000161 ORTHO05D000111 1.9e-06 58.2 228 22.4
Psat5g188800 Pisum sativum HOM05D000161 ORTHO05D000111 1.9e-06 58.2 244 22.5
CANSAT78G2199 Cannabis sativa HOM05D007385 ORTHO05D009349 5.5e-06 56.6 44 50.0
TWI23G0525 Tripterygium wilfordii HOM05D003457 ORTHO05D009746 5.5e-06 56.6 158 22.8


User provided reference genes

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