Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.4e-47 192.6 98 100.0
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 8.5e-32 140.2 82 85.4
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 4.2e-31 137.9 83 81.9
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 4.2e-31 137.9 83 80.7
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 1.2e-30 136.3 96 74.0
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 1.6e-30 136.0 83 80.7
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.6e-30 136.0 83 80.7
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 1.6e-30 136.0 83 80.7
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 2.1e-30 135.6 83 80.7
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 2.7e-30 135.2 83 79.5
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 2.7e-30 135.2 83 78.3
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 3.6e-30 134.8 93 74.2
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 3.6e-30 134.8 83 79.5
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.6e-30 134.8 83 80.7
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.6e-30 134.8 83 80.7
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 3.6e-30 134.8 83 80.7
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 4.7e-30 134.4 83 79.5
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.7e-30 134.4 83 79.5
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.7e-30 134.4 83 79.5
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 4.7e-30 134.4 96 75.0
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 4.7e-30 134.4 96 74.0
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 4.7e-30 134.4 83 80.7
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 6.1e-30 134.0 83 78.3
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 6.1e-30 134.0 83 78.3
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 7.9e-30 133.7 83 80.7
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 7.9e-30 133.7 83 79.5
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 7.9e-30 133.7 98 74.5
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 1.0e-29 133.3 79 84.8
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 1.0e-29 133.3 83 79.5
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 1.4e-29 132.9 83 80.7
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.4e-29 132.9 83 80.7
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 1.4e-29 132.9 96 71.9
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.8e-29 132.5 92 73.9
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.8e-29 132.5 92 73.9
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.8e-29 132.5 83 78.3
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.8e-29 132.5 96 72.9
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.8e-29 132.5 83 77.1
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 2.3e-29 132.1 83 78.3
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 2.3e-29 132.1 83 78.3
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 2.3e-29 132.1 83 78.3
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 3.0e-29 131.7 83 78.3
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 3.0e-29 131.7 96 74.0
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 3.9e-29 131.3 92 70.7
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 3.9e-29 131.3 83 77.1
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 3.9e-29 131.3 83 77.1
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 5.1e-29 131.0 86 75.6
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 5.1e-29 131.0 86 74.4
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 5.1e-29 131.0 96 70.8
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 5.1e-29 131.0 83 77.1
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 6.7e-29 130.6 83 79.5
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 6.7e-29 130.6 90 74.4
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 6.7e-29 130.6 80 80.0
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 6.7e-29 130.6 80 80.0
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 8.8e-29 130.2 80 80.0
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 8.8e-29 130.2 92 72.8
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 8.8e-29 130.2 96 71.9
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.1e-28 129.8 90 75.6
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.1e-28 129.8 94 73.4
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 1.1e-28 129.8 93 72.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 1.1e-28 129.8 83 77.1
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.1e-28 129.8 83 78.3
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.1e-28 129.8 83 75.9
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.5e-28 129.4 96 71.9
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 2.6e-28 128.6 87 75.9
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 2.6e-28 128.6 78 84.6
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 5.7e-28 127.5 83 73.5
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 5.7e-28 127.5 83 73.5
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 9.7e-28 126.7 94 71.3
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 9.7e-28 126.7 94 71.3
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 9.7e-28 126.7 94 71.3
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.3e-27 126.3 80 78.8
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.7e-27 125.9 83 74.7
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 2.2e-27 125.6 83 73.5
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 2.8e-27 125.2 89 70.8
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 2.8e-27 125.2 89 73.0
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 6.3e-27 124.0 83 73.5
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 6.3e-27 124.0 78 78.2
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 6.3e-27 124.0 78 78.2
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 6.3e-27 124.0 78 78.2
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 6.3e-27 124.0 78 78.2
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 6.3e-27 124.0 80 77.5
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 6.3e-27 124.0 95 67.4
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.8e-26 122.5 78 76.9
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.8e-26 122.5 96 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 2.4e-26 122.1 83 72.3
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 2.4e-26 122.1 96 69.8
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 3.1e-26 121.7 90 71.1
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 4.1e-26 121.3 78 76.9
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 4.1e-26 121.3 92 69.6
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 5.3e-26 120.9 90 71.1
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 4.5e-25 117.9 80 72.5
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 1.0e-24 116.7 84 69.0
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 2.2e-24 115.5 95 65.3
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 6.5e-24 114.0 88 67.0
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 9.4e-23 110.2 76 72.4
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 2.1e-22 109.0 90 66.7
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.6e-22 108.2 66 80.3
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 6.1e-22 107.5 65 81.5
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 1.8e-21 105.9 80 67.5
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.3e-21 105.5 63 81.0
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 3.0e-21 105.1 158 43.0
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 5.2e-21 104.4 73 72.6
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 5.2e-21 104.4 68 75.0
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 2.0e-20 102.4 72 72.2
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 4.4e-20 101.3 62 79.0
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 7.4e-20 100.5 77 68.8
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 9.7e-20 100.1 75 69.3
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 3.7e-19 98.2 62 75.8
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 6.3e-19 97.4 62 77.4
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 8.2e-19 97.1 59 79.7
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.4e-18 96.3 71 70.4
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.8e-18 95.9 62 74.2
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 1.6e-17 92.8 78 62.8
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 3.5e-17 91.7 73 68.5
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 5.0e-16 87.8 86 54.7
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.6e-14 82.8 104 51.0
Cre08.g385900 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.7e-06 55.5 78 35.9


User provided reference genes

Program Settings