Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 3.0e-105 385.2 195 100.0
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 5.7e-88 327.8 198 85.4
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 4.8e-87 324.7 199 81.9
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 3.8e-84 315.1 202 78.7
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 2.5e-83 312.4 195 77.9
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 2.5e-83 312.4 195 77.9
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 3.6e-82 308.5 177 82.5
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.3e-81 305.8 197 79.2
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.3e-81 305.8 197 79.2
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.3e-81 305.8 197 79.2
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 1.3e-79 300.1 196 79.1
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 2.8e-79 298.9 199 78.4
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.1e-78 297.0 182 82.4
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 1.8e-78 296.2 199 77.4
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 3.1e-78 295.4 198 76.3
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 4.1e-78 295.0 201 73.6
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 9.1e-78 293.9 179 80.4
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 9.1e-78 293.9 179 80.4
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 9.1e-78 293.9 179 80.4
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 9.1e-78 293.9 179 80.4
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.2e-77 293.5 197 77.2
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 1.6e-77 293.1 196 74.5
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 1.6e-77 293.1 197 76.6
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.0e-77 292.7 201 77.1
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 2.0e-77 292.7 197 77.7
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 2.7e-77 292.4 182 80.8
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.5e-77 292.0 193 76.7
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 3.5e-77 292.0 197 74.1
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 3.5e-77 292.0 180 80.0
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 4.5e-77 291.6 182 80.2
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 4.5e-77 291.6 182 80.2
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 7.7e-77 290.8 176 80.1
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.0e-76 290.4 182 80.2
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 1.0e-76 290.4 179 81.6
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.3e-76 290.0 182 79.7
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.7e-76 289.7 180 79.4
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.3e-76 289.3 182 79.7
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 2.3e-76 289.3 182 79.1
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 2.9e-76 288.9 179 79.9
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 3.8e-76 288.5 186 76.9
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 5.0e-76 288.1 196 72.4
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 5.0e-76 288.1 203 72.4
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.5e-76 287.7 176 79.5
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 2.5e-75 285.8 185 76.2
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 4.2e-75 285.0 200 74.0
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 7.2e-75 284.3 197 73.1
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 7.2e-75 284.3 178 79.8
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.2e-74 283.5 183 77.6
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.8e-74 282.3 198 72.2
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 2.8e-74 282.3 178 78.7
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 2.8e-74 282.3 183 77.6
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 2.8e-74 282.3 167 83.2
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.0e-73 280.4 204 71.6
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.0e-73 280.4 177 78.5
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.0e-73 280.4 203 70.9
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.4e-73 280.0 198 72.2
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 2.3e-73 279.3 196 73.0
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 3.0e-73 278.9 201 70.6
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 4.0e-73 278.5 182 76.9
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 5.2e-73 278.1 184 75.5
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 8.8e-73 277.3 203 70.4
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.2e-72 276.9 175 78.9
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.2e-72 276.9 183 76.5
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.2e-71 272.7 174 75.9
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 2.2e-71 272.7 180 75.6
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 6.3e-71 271.2 176 75.6
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 5.4e-70 268.1 179 75.4
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 5.4e-70 268.1 196 71.4
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 7.0e-70 267.7 196 71.9
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 1.3e-68 263.5 192 71.9
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.3e-68 263.5 197 68.5
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 3.8e-68 261.9 199 69.3
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 2.5e-67 259.2 172 73.8
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.2e-66 256.9 187 68.4
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.2e-66 256.9 187 68.4
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 3.6e-66 255.4 209 65.1
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 6.1e-66 254.6 174 71.8
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 6.8e-65 251.1 201 66.7
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.2e-64 250.4 186 68.8
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.2e-64 250.4 186 68.8
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.2e-64 250.4 186 68.8
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.2e-64 250.4 186 68.8
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 1.2e-64 250.4 170 71.2
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 3.4e-64 248.8 204 63.7
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 3.4e-64 248.8 188 69.7
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 3.4e-64 248.8 190 65.8
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 4.4e-64 248.4 204 63.7
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 9.8e-64 247.3 196 65.8
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.3e-63 246.9 174 74.7
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 2.2e-63 246.1 187 66.3
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.2e-63 246.1 175 70.3
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 2.9e-63 245.7 189 66.1
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 2.9e-63 245.7 189 66.1
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.9e-63 245.7 167 73.7
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 8.3e-63 244.2 176 69.9
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 4.3e-59 231.9 212 60.4
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 2.6e-56 222.6 156 71.8
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 4.4e-56 221.9 144 73.6
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 2.3e-49 199.5 175 57.1
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.5e-48 196.8 196 57.1
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 3.4e-48 195.7 174 55.2
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.1e-45 186.4 105 83.8
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.7e-45 186.0 105 82.9
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 3.5e-45 185.7 143 65.7
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 9.5e-43 177.6 173 51.4
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.1e-41 174.1 175 54.9
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 7.6e-40 167.9 174 47.7
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 4.9e-39 165.2 98 81.6
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.5e-32 143.7 173 49.1
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.1e-30 137.5 114 59.6
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 3.4e-24 115.9 132 51.5
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 1.1e-17 94.4 58 75.9
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.9e-15 85.5 63 69.8
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.1e-11 74.3 46 76.1
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 4.0e-09 65.9 60 60.0


User provided reference genes

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