Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 4.4e-71 271.2 134 100.0
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.5e-58 228.8 136 83.1
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 3.1e-53 211.8 134 79.1
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 1.7e-30 136.3 132 56.8
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 1.3e-22 110.2 138 51.4
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 1.6e-20 103.2 135 48.1
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 2.1e-20 102.8 117 53.8
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 2.7e-20 102.4 124 50.0
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 2.3e-19 99.4 124 50.8
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.0e-19 99.0 135 45.2
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 5.1e-19 98.2 134 45.5
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.6e-17 92.0 141 46.8
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.1e-16 89.0 135 45.2
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 5.2e-16 88.2 136 43.4
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 5.2e-16 88.2 134 44.0
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.5e-15 86.7 111 45.9
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 2.0e-15 86.3 128 43.0
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 2.6e-15 85.9 137 46.7
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 3.4e-15 85.5 126 47.6
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 4.4e-15 85.1 127 46.5
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 9.9e-15 84.0 138 43.5
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 1.3e-14 83.6 123 42.3
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 1.3e-14 83.6 129 43.4
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 2.2e-14 82.8 130 43.1
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 2.9e-14 82.4 113 46.0
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 4.9e-14 81.6 112 43.8
SalBow1G4058 Salvia bowleyana HOM05D006722 ORTHO05D007944 6.4e-14 81.3 73 61.6
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.9e-13 79.7 110 46.4
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 1.9e-13 79.7 128 41.4
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 3.2e-13 79.0 120 44.2
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 4.1e-13 78.6 132 42.4
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 5.4e-13 78.2 118 39.8
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 5.4e-13 78.2 124 40.3
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 7.1e-13 77.8 115 40.9
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 7.1e-13 77.8 126 41.3
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 7.1e-13 77.8 126 41.3
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 7.1e-13 77.8 112 47.3
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 7.1e-13 77.8 139 43.2
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 9.2e-13 77.4 81 53.1
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 9.2e-13 77.4 94 53.2
SGA_v2.0_scaffold356G49791 Striga asiatica HOM05D006722 ORTHO05D007944 9.2e-13 77.4 78 53.8
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.2e-12 77.0 130 39.2
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 1.6e-12 76.6 124 46.8
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 1.6e-12 76.6 112 41.1
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 1.6e-12 76.6 112 41.1
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 1.6e-12 76.6 132 40.2
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.6e-12 76.6 96 50.0
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 1.6e-12 76.6 135 39.3
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 2.1e-12 76.3 108 42.6
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 2.1e-12 76.3 108 42.6
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 2.1e-12 76.3 108 42.6
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 6.0e-12 74.7 124 42.7
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 7.8e-12 74.3 77 51.9
Nitab4.5_0005380g0010 Nicotiana tabacum HOM05D006722 ORTHO05D007944 7.8e-12 74.3 116 39.7
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 7.8e-12 74.3 161 35.4
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.0e-11 73.9 126 41.3
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 1.3e-11 73.6 131 38.2
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 1.3e-11 73.6 85 49.4
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 1.7e-11 73.2 133 42.1
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 2.3e-11 72.8 126 42.1
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 6.6e-11 71.2 129 38.8
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 1.5e-10 70.1 127 39.4
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 2.5e-10 69.3 134 36.6
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 4.3e-10 68.6 124 39.5
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 7.3e-10 67.8 124 39.5
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 7.3e-10 67.8 138 40.6
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 9.6e-10 67.4 125 38.4
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 1.2e-09 67.0 129 36.4
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 1.6e-09 66.6 71 50.7
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.6e-09 66.6 131 36.6
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 2.1e-09 66.2 141 36.2
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 2.8e-09 65.9 124 38.7
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.8e-09 65.9 121 38.8
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 3.6e-09 65.5 159 37.1
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 6.2e-09 64.7 135 39.3
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 6.2e-09 64.7 119 37.8
HPP92_001821 Vanilla planifolia HOM05D026263 ORTHO05D007944 1.1e-08 63.9 128 39.1
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.8e-08 63.2 120 40.0
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.8e-08 63.2 130 37.7
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.8e-08 63.2 130 37.7
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 1.8e-08 63.2 130 37.7
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 1.2e-07 60.5 145 35.9
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 2.6e-07 59.3 117 35.0
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 1.7e-06 56.6 75 46.7
TPR.G21773 Trifolium pratense HOM05D006722 ORTHO05D007944 1.7e-06 56.6 123 37.4
Actinidia11070 Actinidia chinensis HOM05D006722 ORTHO05D007944 6.4e-06 54.7 76 47.4
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 6.4e-06 54.7 180 30.6
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 6.4e-06 54.7 137 32.8


User provided reference genes

Program Settings