Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01048 Erythranthe guttata HOM05D007208 ORTHO05D009090 4.1e-120 436.0 542 100.0
Oeu041287.1 Olea europaea HOM05D007208 ORTHO05D009090 1.1e-43 182.2 505 76.8
arahy.Tifrunner.gnm1.ann1.B872W9 Arachis hypogaea HOM05D007208 ORTHO05D009090 8.8e-38 162.5 486 74.9
Peaxi162Scf01258g00013 Petunia axillaris HOM05D007208 ORTHO05D009090 1.2e-37 162.2 502 77.9
arahy.Tifrunner.gnm1.ann1.LJ4E0Z Arachis hypogaea HOM05D007208 ORTHO05D009090 3.4e-37 160.6 486 77.0
SGA_v2.0_scaffold261G45922 Striga asiatica HOM05D007208 ORTHO05D009090 1.4e-35 155.2 106 88.7
Solyc10g008510.3 Solanum lycopersicum HOM05D007208 ORTHO05D009090 1.7e-33 148.3 106 84.0
PGSC0003DMG400021677 Solanum tuberosum HOM05D007208 ORTHO05D009090 2.3e-33 147.9 106 83.0
Nitab4.5_0000635g0090 Nicotiana tabacum HOM05D007208 ORTHO05D009090 2.9e-33 147.5 106 84.0
Sopen10g004330 Solanum pennellii HOM05D007208 ORTHO05D009090 2.9e-33 147.5 106 83.0
Nitab4.5_0000998g0040 Nicotiana tabacum HOM05D007208 ORTHO05D009090 5.0e-33 146.7 106 83.0
Lalb_Chr03g0031321 Lupinus albus HOM05D007208 ORTHO05D009090 6.5e-33 146.4 106 81.1
VMungo1127G1221 Vigna mungo HOM05D007208 ORTHO05D009090 8.6e-33 146.0 106 81.1
CAN.G168.33 Capsicum annuum HOM05D007208 ORTHO05D009090 1.9e-32 144.8 106 82.1
Phvul.011G168600 Phaseolus vulgaris HOM05D007208 ORTHO05D009090 1.9e-32 144.8 106 80.2
TPR.G16118 Trifolium pratense HOM05D007208 ORTHO05D009090 2.5e-32 144.4 106 80.2
CSS0042005 Camellia sinensis var. sinensis HOM05D007208 ORTHO05D009090 7.2e-32 142.9 106 68.9
MELO3C018751.2 Cucumis melo HOM05D007208 ORTHO05D009090 9.5e-32 142.5 106 65.1
Medtr8g054410 Medicago truncatula HOM05D007208 ORTHO05D009090 2.1e-31 141.4 106 79.2
Psat4g156960 Pisum sativum HOM05D007208 ORTHO05D009090 2.1e-31 141.4 106 77.4
RcHm_v2.0_Chr2g0162271 Rosa chinensis HOM05D007208 ORTHO05D009090 2.1e-31 141.4 104 84.6
Ca_27341_v3 Cicer arietinum L. HOM05D007208 ORTHO05D009090 4.7e-31 140.2 106 78.3
Ca_30865_v3 Cicer arietinum L. HOM05D007208 ORTHO05D009090 4.7e-31 140.2 106 78.3
A10p02100 Brassica napus HOM05D007208 ORTHO05D009090 6.1e-31 139.8 105 79.0
BraA10t42479Z Brassica rapa HOM05D007208 ORTHO05D009090 6.1e-31 139.8 105 79.0
Hma1.2p1_0875F.1_g231470 Hydrangea macrophylla HOM05D007208 ORTHO05D009090 6.1e-31 139.8 102 83.3
SalBow1G0905 Salvia bowleyana HOM05D007208 ORTHO05D009090 1.0e-30 139.0 176 71.6
BcaB02g06917 Brassica carinata HOM05D007208 ORTHO05D009090 1.4e-30 138.7 105 78.1
BcaC05g24521 Brassica carinata HOM05D007208 ORTHO05D009090 1.4e-30 138.7 105 77.1
C05p02010 Brassica napus HOM05D007208 ORTHO05D009090 1.4e-30 138.7 105 77.1
BolC5t28979H Brassica oleracea HOM05D007208 ORTHO05D009090 1.4e-30 138.7 105 77.1
FAN05G4557 Fragaria x ananassa HOM05D007208 ORTHO05D009090 1.4e-30 138.7 104 80.8
Sp1g02490 Schrenkiella parvula HOM05D007208 ORTHO05D009090 1.4e-30 138.7 105 78.1
CARHR002920 Cardamine hirsuta HOM05D007208 ORTHO05D009090 3.0e-30 137.5 105 78.1
Manes.12G086900 Manihot esculenta HOM05D007208 ORTHO05D009090 3.0e-30 137.5 98 84.7
Aqoxy1G02638 Aquilegia oxysepala HOM05D007208 ORTHO05D009090 5.2e-30 136.7 106 79.2
arahy.Tifrunner.gnm1.ann1.KEA2PN Arachis hypogaea HOM05D007208 ORTHO05D009090 8.8e-30 136.0 486 77.8
Lj3g0013344 Lotus japonicus HOM05D007208 ORTHO05D009090 1.2e-29 135.6 98 84.7
Thhalv10007014m.g Eutrema salsugineum HOM05D007208 ORTHO05D009090 1.5e-29 135.2 105 76.2
AL1G13070 Arabidopsis lyrata HOM05D007208 ORTHO05D009090 3.4e-29 134.0 105 76.2
AT1G03560 Arabidopsis thaliana HOM05D007208 ORTHO05D009090 3.4e-29 134.0 105 76.2
Carub.0001s0270 Capsella rubella HOM05D007208 ORTHO05D009090 9.8e-29 132.5 104 76.0
TAR629G2939 Trochodendron aralioides HOM05D007208 ORTHO05D009090 1.8e-27 128.3 97 81.4
Aa31LG1G20920 Aethionema arabicum HOM05D000389 ORTHO05D009090 3.1e-27 127.5 104 72.1
Cc05_g06710 Coffea canephora HOM05D007208 ORTHO05D009090 1.2e-26 125.6 94 83.0
Rhsim06G0149200 Rhododendron simsii HOM05D007208 ORTHO05D009090 3.5e-26 124.0 92 82.6
arahy.Tifrunner.gnm1.ann1.VA1KA7 Arachis hypogaea HOM05D007208 ORTHO05D009090 7.8e-26 122.9 105 60.0
Glyma.10G265500 Glycine max HOM05D007208 ORTHO05D009090 1.7e-25 121.7 92 80.4
ECA233G0015 Erigeron canadensis HOM05D007208 ORTHO05D009090 1.9e-24 118.2 94 64.9
Sed0017509 Sechium edule HOM05D007208 ORTHO05D009090 1.9e-24 118.2 91 78.0
Manes.12G087100 Manihot esculenta HOM05D007208 ORTHO05D009090 2.5e-24 117.9 86 84.9
Potri.019G103400 Populus trichocarpa HOM05D007208 ORTHO05D009090 3.3e-24 117.5 86 87.2
COL.COLO4_35409 Corchorus olitorius HOM05D007208 ORTHO05D009090 5.6e-24 116.7 86 84.9
HanXRQChr15g0492931 Helianthus annuus HOM05D007208 ORTHO05D009090 5.6e-24 116.7 93 75.3
Duzib248G0625 Durio zibethinus HOM05D007208 ORTHO05D009090 9.5e-24 115.9 86 83.7
Sabra19G0114200 Salix brachista HOM05D007208 ORTHO05D009090 9.5e-24 115.9 86 86.0
MD17G1080900 Malus domestica HOM05D007208 ORTHO05D009090 1.2e-23 115.5 85 67.1
Prupe.3G234000 Prunus persica HOM05D007208 ORTHO05D009090 1.2e-23 115.5 86 67.4
HanXRQChr17g0557691 Helianthus annuus HOM05D007208 ORTHO05D009090 2.8e-23 114.4 92 73.9
Thecc.05G160800 Theobroma cacao HOM05D007208 ORTHO05D009090 2.8e-23 114.4 84 83.3
ClCG02G001180 Citrullus lanatus HOM05D007208 ORTHO05D009090 3.6e-23 114.0 86 64.0
Haze_13114 Corylus avellana HOM05D007208 ORTHO05D009090 3.6e-23 114.0 88 81.8
Hma1.2p1_0875F.1_g231460 Hydrangea macrophylla HOM05D007208 ORTHO05D009090 3.6e-23 114.0 86 81.4
RcHm_v2.0_Chr4g0446301 Rosa chinensis HOM05D007208 ORTHO05D009090 4.7e-23 113.6 84 84.5
FvH4_6g45000 Fragaria vesca HOM05D007208 ORTHO05D009090 6.1e-23 113.2 84 83.3
CiPaw.03G172500 Carya illinoinensis HOM05D007208 ORTHO05D009090 8.0e-23 112.8 86 77.9
Sc21g0002370 Simmondsia chinensis HOM05D007208 ORTHO05D009090 8.0e-23 112.8 84 81.0
GSVIVG01030557001 Vitis vinifera HOM05D007208 ORTHO05D009090 8.0e-23 112.8 84 78.6
EL10Ac9g22658 Beta vulgaris HOM05D007208 ORTHO05D009090 1.0e-22 112.5 471 80.9
Lj8P115T34 Lonicera japonica HOM05D007208 ORTHO05D009090 1.0e-22 112.5 83 84.3
SHI10482 Sapria himalayana HOM05D007208 ORTHO05D009090 1.0e-22 112.5 88 80.7
PGR042G3663 Punica granatum HOM05D007208 ORTHO05D009090 1.4e-22 112.1 85 81.2
Gohir.A03G158600 Gossypium hirsutum HOM05D007208 ORTHO05D009090 1.8e-22 111.7 84 83.3
Gorai.005G204300 Gossypium raimondii HOM05D007208 ORTHO05D009090 2.3e-22 111.3 86 82.6
QL10p048755 Quercus lobata HOM05D007208 ORTHO05D009090 4.0e-22 110.5 85 80.0
Ciclev10014552m.g Citrus clementina HOM05D007208 ORTHO05D009090 2.0e-21 108.2 86 76.7
Eucgr.A01782 Eucalyptus grandis HOM05D007208 ORTHO05D009090 4.4e-21 107.1 85 76.5
FAN09G1518 Fragaria x ananassa HOM05D007208 ORTHO05D009090 4.4e-21 107.1 84 79.8
Lsat_1_v5_gn_8_132240 Lactuca sativa HOM05D007208 ORTHO05D009090 5.7e-21 106.7 105 51.4
TWI75G0324 Tripterygium wilfordii HOM05D007208 ORTHO05D009090 1.7e-20 105.1 86 60.5
ATR0626G143 Amborella trichopoda HOM05D007208 ORTHO05D009090 2.9e-20 104.4 86 80.2
THA.LOC104826027 Tarenaya hassleriana HOM05D007208 ORTHO05D009090 3.7e-20 104.0 85 75.3
Ah.01g002470 Amaranthus hybridus HOM05D007208 ORTHO05D009090 8.3e-20 102.8 167 73.7
Zm00001eb069300 Zea mays HOM05D007208 ORTHO05D009090 2.4e-19 101.3 84 60.7
CDE05G2253 Ceratophyllum demersum HOM05D007208 ORTHO05D009090 3.5e-18 97.4 79 74.7
Atru.chr6.3038 Acer truncatum HOM05D007208 ORTHO05D009090 3.0e-17 94.4 84 73.8
PSO675G0351 Papaver somniferum HOM05D007208 ORTHO05D009090 3.0e-17 94.4 86 58.1
PSO541G2896 Papaver somniferum HOM05D007208 ORTHO05D009090 3.9e-17 94.0 86 58.1
SEGI_00392 Sequoiadendron giganteum HOM05D007208 ORTHO05D009090 3.9e-17 94.0 87 58.6
Actinidia09879 Actinidia chinensis HOM05D000006 ORTHO05D000001 1.2e-15 89.0 67 83.6
Nn1g06681 Nelumbo nucifera HOM05D007208 ORTHO05D009090 1.1e-14 85.9 67 83.6
CDE05G0255 Ceratophyllum demersum HOM05D007208 ORTHO05D009090 1.8e-14 85.1 69 58.0
Dinv03836 Davidia involucrata HOM05D007208 ORTHO05D009090 3.1e-14 84.3 63 88.9
DCAR_021232 Daucus carota HOM05D007208 ORTHO05D009090 4.0e-14 84.0 86 68.6
CANSAT35G0587 Cannabis sativa HOM05D007208 ORTHO05D009090 6.8e-14 83.2 84 67.9
MBI18_g13208_MAGBIO Magnolia biondii HOM05D007208 ORTHO05D009090 4.4e-13 80.5 86 68.6
AUR62014989 Chenopodium quinoa HOM05D007208 ORTHO05D009090 6.4e-12 76.6 84 63.1
CsaV3_7G004270 Cucumis sativus L. HOM05D007208 ORTHO05D009090 1.4e-11 75.5 62 61.3
HPP92_009506 Vanilla planifolia HOM05D007208 ORTHO05D009090 3.2e-11 74.3 84 46.4
RcHm_v2.0_Chr2g0162291 Rosa chinensis HOM05D007208 ORTHO05D009090 4.1e-11 73.9 47 72.3
FAN02G1502 Fragaria x ananassa HOM05D007208 ORTHO05D009090 5.4e-11 73.6 47 68.1
MD09G1090900 Malus domestica HOM05D007208 ORTHO05D009090 1.0e-09 69.3 43 69.8
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 2.3e-09 68.2 60 56.7
Hund14539 Selenicereus undatus HOM05D007208 ORTHO05D009090 1.5e-08 65.5 79 63.3
Os07g0491500 Oryza sativa ssp. japonica HOM05D007208 ORTHO05D009090 2.5e-08 64.7 84 58.3
Thecc.02G175200 Theobroma cacao HOM05D007208 ORTHO05D009090 7.3e-08 63.2 63 50.8
FAN14G2434 Fragaria x ananassa HOM05D007208 ORTHO05D009090 1.2e-07 62.4 39 76.9
arahy.Tifrunner.gnm1.ann1.APG80P Arachis hypogaea HOM05D007208 ORTHO05D009090 1.6e-07 62.0 55 78.2
C07p02640 Brassica napus HOM05D026336 ORTHO05D026439 3.6e-07 60.8 45 55.6
BolC7t40662H Brassica oleracea HOM05D026336 ORTHO05D026439 3.6e-07 60.8 45 55.6


User provided reference genes

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