Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 1.7e-67 259.2 134 100.0
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.9e-26 122.9 140 54.3
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 1.6e-25 119.8 154 55.8
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 5.4e-21 104.8 122 54.1
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 3.5e-20 102.1 122 54.1
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-18 96.7 139 54.0
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 2.1e-17 92.8 130 50.0
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 2.8e-17 92.4 111 54.1
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 8.1e-17 90.9 134 49.3
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 1.4e-16 90.1 107 56.1
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 8.9e-16 87.4 135 48.1
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.2e-15 87.0 137 45.3
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 2.0e-15 86.3 140 47.1
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 2.6e-15 85.9 100 56.0
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 3.4e-15 85.5 134 50.0
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 5.8e-15 84.7 108 52.8
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 7.6e-15 84.3 132 47.0
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 7.6e-15 84.3 139 46.8
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 1.3e-14 83.6 102 53.9
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 1.3e-14 83.6 137 46.7
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 1.3e-14 83.6 133 46.6
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 1.7e-14 83.2 136 44.1
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.7e-14 83.2 107 51.4
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 2.2e-14 82.8 101 53.5
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 2.2e-14 82.8 127 44.9
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 2.9e-14 82.4 78 61.5
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 2.9e-14 82.4 132 44.7
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 4.9e-14 81.6 106 50.9
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.9e-14 81.6 125 48.0
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 6.4e-14 81.3 132 46.2
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 6.4e-14 81.3 132 42.4
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 6.4e-14 81.3 136 47.8
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 6.4e-14 81.3 114 48.2
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 8.4e-14 80.9 108 50.0
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-13 80.5 126 46.0
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.1e-13 80.5 120 45.0
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.1e-13 80.5 132 50.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.1e-13 80.5 134 43.3
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.4e-13 80.1 103 48.5
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 1.4e-13 80.1 139 47.5
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.9e-13 79.7 160 46.2
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 2.4e-13 79.3 129 41.9
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 3.2e-13 79.0 95 55.8
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 4.1e-13 78.6 74 60.8
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 4.1e-13 78.6 89 55.1
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 5.4e-13 78.2 131 43.5
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 5.4e-13 78.2 131 43.5
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 5.4e-13 78.2 73 61.6
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 7.1e-13 77.8 146 43.2
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 9.2e-13 77.4 134 44.8
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 9.2e-13 77.4 134 44.8
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 9.2e-13 77.4 73 64.4
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 1.2e-12 77.0 106 46.2
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 1.2e-12 77.0 106 46.2
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.2e-12 77.0 146 43.2
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 1.2e-12 77.0 142 43.0
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.2e-12 77.0 131 47.3
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.6e-12 76.6 125 47.2
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.6e-12 76.6 139 45.3
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 2.1e-12 76.3 130 41.5
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.1e-12 76.3 138 41.3
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 2.7e-12 75.9 121 46.3
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 2.7e-12 75.9 106 49.1
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 3.5e-12 75.5 141 44.0
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 3.5e-12 75.5 120 45.0
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 4.6e-12 75.1 133 42.9
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 6.0e-12 74.7 91 54.9
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 7.8e-12 74.3 121 43.8
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 7.8e-12 74.3 144 43.8
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.0e-11 73.9 112 49.1
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.0e-11 73.9 136 46.3
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 1.3e-11 73.6 135 45.2
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 1.3e-11 73.6 74 55.4
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.7e-11 73.2 72 61.1
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.7e-11 73.2 122 43.4
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 3.0e-11 72.4 100 49.0
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 3.9e-11 72.0 101 52.5
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 5.1e-11 71.6 83 55.4
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 6.6e-11 71.2 107 45.8
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 1.5e-10 70.1 138 39.9
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.9e-10 69.7 106 41.5
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.9e-10 69.7 131 41.2
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.5e-10 69.3 96 49.0
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.5e-10 69.3 122 43.4
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 2.5e-10 69.3 125 42.4
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 3.3e-10 68.9 144 41.7
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.3e-10 68.9 77 55.8
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 1.2e-09 67.0 104 46.2
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.6e-09 66.6 139 43.2
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 2.1e-09 66.2 84 48.8
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 2.8e-09 65.9 61 63.9
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 3.6e-09 65.5 135 40.0
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.6e-09 65.5 86 50.0
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 4.7e-09 65.1 103 48.5
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.7e-09 65.1 103 48.5
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.7e-09 65.1 104 47.1
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 6.2e-09 64.7 87 51.7
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 8.1e-09 64.3 103 46.6
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 1.4e-08 63.5 71 54.9
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 1.4e-08 63.5 96 43.8
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.4e-08 62.8 139 41.0
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 2.4e-08 62.8 100 46.0
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 2.4e-08 62.8 75 54.7
SalBow5G1753 Salvia bowleyana HOM05D006100 ORTHO05D007539 3.1e-08 62.4 103 42.7
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 5.2e-08 61.6 92 44.6
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 6.8e-08 61.2 131 38.9
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 1.2e-07 60.5 71 54.9
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.6e-07 59.3 67 52.2
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 3.4e-07 58.9 83 48.2
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 7.6e-07 57.8 89 47.2
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.2e-06 56.2 112 42.0
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 2.2e-06 56.2 121 37.2
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 2.9e-06 55.8 112 40.2
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 8.4e-06 54.3 118 39.8


User provided reference genes

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