Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 0.0e+00 4336.2 2173 100.0
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 0.0e+00 3223.3 2221 74.0
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 0.0e+00 3035.4 2198 70.5
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 0.0e+00 2923.7 2249 67.6
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 0.0e+00 2746.1 2238 63.8
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 0.0e+00 2642.5 2225 61.0
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 2634.4 2240 61.7
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 0.0e+00 2622.8 2255 61.0
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 0.0e+00 2604.7 2234 61.1
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2596.6 2242 60.4
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 0.0e+00 2585.1 2246 60.5
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2585.1 2245 60.3
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 0.0e+00 2583.5 2221 60.6
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 0.0e+00 2579.7 2221 60.4
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 2578.5 2239 60.9
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 0.0e+00 2578.1 2230 60.5
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2556.9 2239 60.5
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 0.0e+00 2512.6 2232 59.0
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 0.0e+00 2508.0 2234 58.7
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 0.0e+00 2482.2 2239 59.3
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2479.5 2245 58.4
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 0.0e+00 2471.4 2248 58.3
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 0.0e+00 2471.0 2244 58.3
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 0.0e+00 2468.3 2241 58.5
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 0.0e+00 2461.8 2238 57.9
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 0.0e+00 2457.9 2240 58.6
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 0.0e+00 2450.2 2248 58.0
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 0.0e+00 2447.5 2246 57.6
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 2445.6 2244 57.3
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 2445.6 2238 57.7
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 2442.5 2247 57.9
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2439.5 2238 57.4
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 0.0e+00 2414.0 2253 57.1
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 0.0e+00 2414.0 2216 58.3
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 2411.3 2249 57.0
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 0.0e+00 2404.4 2233 57.2
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 2388.2 2231 56.4
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 0.0e+00 2387.5 2206 56.9
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 0.0e+00 2385.1 2249 56.8
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 0.0e+00 2380.1 2235 56.5
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 0.0e+00 2378.6 2204 57.3
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 0.0e+00 2377.8 2229 56.6
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 2371.3 2237 57.2
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 0.0e+00 2367.8 2229 57.7
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2364.7 2236 56.6
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 0.0e+00 2360.1 2230 55.9
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 2353.6 2239 57.0
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 0.0e+00 2345.5 2240 56.7
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 0.0e+00 2339.7 2220 56.2
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 0.0e+00 2338.5 2229 56.8
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 0.0e+00 2323.1 2240 55.5
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 0.0e+00 2312.7 2242 56.2
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 0.0e+00 2307.7 2230 56.0
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 0.0e+00 2303.9 2236 55.9
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 0.0e+00 2298.1 2235 55.7
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 2297.7 2213 56.3
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 0.0e+00 2290.8 2242 55.9
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 2290.8 2240 55.7
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 0.0e+00 2289.6 2228 54.8
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 2283.4 2244 55.7
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 0.0e+00 2281.5 2243 55.6
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 2280.4 2228 56.2
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 2278.4 2223 55.8
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 0.0e+00 2267.7 2217 54.8
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 0.0e+00 2265.7 2208 56.3
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 0.0e+00 2260.3 2265 54.1
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 0.0e+00 2229.5 2250 54.7
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 0.0e+00 2202.9 2211 54.5
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 0.0e+00 2199.1 2214 54.2
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 0.0e+00 2196.0 2241 53.2
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 2184.8 2211 53.7
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 0.0e+00 2184.8 2211 53.7
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 0.0e+00 2184.5 2209 53.9
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 0.0e+00 2180.2 2215 53.7
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 2174.1 2205 53.6
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 0.0e+00 2174.1 2205 53.6
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 0.0e+00 2173.3 2209 53.9
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2162.5 2335 51.6
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 0.0e+00 2065.4 2211 51.7
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 0.0e+00 2043.9 1829 58.4
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 0.0e+00 2041.9 2044 54.7
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 0.0e+00 2033.1 1834 58.6
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 0.0e+00 2026.1 2243 50.7
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 0.0e+00 2024.2 2317 49.7
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 2022.7 1900 56.1
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 0.0e+00 1992.6 1841 58.0
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 0.0e+00 1976.1 2227 49.8
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 1895.9 1730 58.3
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 0.0e+00 1839.3 2198 48.2
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 0.0e+00 1716.0 2399 43.1
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 0.0e+00 1679.1 2166 46.4
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 0.0e+00 1671.4 1419 60.8
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 0.0e+00 1518.4 1700 49.9
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 0.0e+00 1469.1 1374 57.9
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 0.0e+00 1394.8 2350 38.4
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 0.0e+00 1353.2 2338 37.3
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 0.0e+00 1335.1 2237 37.9
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 1209.1 1138 57.3
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1176.4 1023 59.0
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1124.0 1052 56.8
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1114.0 1198 51.7
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 6.5e-310 1068.5 947 59.2
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 3.9e-294 1016.1 1417 44.5
Lju41A18T48 Lonicera japonica HOM05D005746 ORTHO05D007105 3.5e-271 939.9 778 63.9
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.1e-259 901.7 1015 50.6
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 5.5e-248 862.8 2173 31.3
BcaNung05131 Brassica carinata HOM05D005746 ORTHO05D007105 1.8e-206 724.9 859 46.3
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 7.3e-200 703.0 1331 35.8
CDE09G1403 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 1.5e-197 695.3 724 52.5
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 8.7e-153 546.6 979 37.4
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 2.6e-149 535.0 2578 25.4
Migut.L00530 Erythranthe guttata HOM05D005746 ORTHO05D007105 6.9e-142 510.4 748 45.7
Cpa.g.sc14.9 Carica papaya HOM05D005746 ORTHO05D007105 8.5e-108 397.1 441 47.4
Gohir.D09G015833 Gossypium hirsutum HOM05D005746 ORTHO05D007105 1.6e-98 366.3 379 52.5
CAN.G284.10 Capsicum annuum HOM05D005746 ORTHO05D007105 1.5e-83 316.6 324 52.5
CAN.G691.2 Capsicum annuum HOM05D005746 ORTHO05D007105 1.2e-77 297.0 311 51.8
CARHR159400 Cardamine hirsuta HOM05D005746 ORTHO05D007105 2.3e-76 292.7 272 59.9
CAN.G525.35 Capsicum annuum HOM05D005746 ORTHO05D007105 1.5e-67 263.5 242 55.8
CAN.G65.185 Capsicum annuum HOM05D005746 ORTHO05D007105 1.8e-65 256.5 324 46.3
CAN.G697.12 Capsicum annuum HOM05D005746 ORTHO05D007105 4.0e-57 228.8 235 52.8
CAN.G352.19 Capsicum annuum HOM05D005746 ORTHO05D007105 1.9e-51 209.9 279 43.7
CsaV3_UNG114880 Cucumis sativus L. HOM05D005746 ORTHO05D007105 3.1e-49 202.6 173 61.8
CAN.G385.2 Capsicum annuum HOM05D005746 ORTHO05D007105 9.3e-38 164.5 225 43.1
Lj2g0022018 Lotus japonicus HOM05D005746 ORTHO05D007105 6.0e-37 161.8 138 61.6
VMungo1127G1036 Vigna mungo HOM05D005746 ORTHO05D007105 8.7e-36 157.9 97 79.4
CAN.G853.24 Capsicum annuum HOM05D005746 ORTHO05D007105 8.4e-31 141.4 143 53.1
Gohir.A11G290200 Gossypium hirsutum HOM05D005746 ORTHO05D007105 7.9e-29 134.8 118 56.8
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis HOM05D005746 ORTHO05D007105 1.3e-28 134.0 483 25.9
Cre15.g642050 Chlamydomonas reinhardtii HOM05D005746 ORTHO05D007105 1.8e-28 133.7 253 36.0
VMungo1127G1975 Vigna mungo HOM05D005746 ORTHO05D007105 2.5e-22 113.2 109 59.6
VMungo0331G1774 Vigna mungo HOM05D005746 ORTHO05D007105 3.4e-16 92.8 103 54.4
Cfa022176 Carpinus fangiana HOM05D005746 ORTHO05D125765 9.4e-14 84.7 384 23.4
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis HOM05D005746 ORTHO05D007105 3.3e-11 76.3 97 38.1


User provided reference genes

Program Settings