Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 5.3e-97 358.2 264 100.0
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 5.8e-43 178.7 264 65.5
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 3.2e-33 146.4 263 37.3
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 4.2e-33 146.0 264 57.6
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.6e-32 144.1 223 63.7
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 9.6e-30 134.8 220 56.4
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 2.4e-28 130.2 262 56.5
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 2.4e-28 130.2 291 34.0
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 5.3e-28 129.0 266 56.4
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 1.5e-27 127.5 220 46.8
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 2.6e-27 126.7 262 33.2
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 3.4e-27 126.3 220 47.3
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 7.6e-27 125.2 262 34.4
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.4e-25 120.9 281 45.9
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 2.4e-25 120.2 269 33.1
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 4.6e-24 115.9 118 54.2
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.9e-23 112.8 259 32.8
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 5.1e-23 112.5 258 55.0
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 2.5e-22 110.2 259 48.6
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 5.6e-22 109.0 258 41.9
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 9.6e-22 108.2 278 32.0
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 4.0e-20 102.8 279 29.7
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 6.9e-20 102.1 262 44.3
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 6.9e-20 102.1 263 44.1
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 2.0e-19 100.5 259 43.2
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 2.6e-19 100.1 271 51.7
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 4.5e-19 99.4 220 51.4
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 1.0e-18 98.2 223 45.3
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 1.7e-18 97.4 252 30.2
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 2.9e-18 96.7 264 42.8
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 8.4e-18 95.1 220 55.9
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 5.5e-17 92.4 284 38.7
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 5.5e-17 92.4 228 32.5
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 5.5e-17 92.4 221 51.1
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 1.6e-16 90.9 295 31.9
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 2.1e-16 90.5 265 26.8
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 2.7e-16 90.1 262 40.8
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 3.5e-16 89.7 301 31.2
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 6.0e-16 89.0 259 27.0
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 6.0e-16 89.0 233 47.2
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 6.0e-16 89.0 226 30.5
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 7.9e-16 88.6 220 56.8
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.3e-15 87.0 220 34.1
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 3.9e-15 86.3 217 30.0
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 8.7e-15 85.1 208 53.4
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 3.3e-14 83.2 220 40.9
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 3.3e-14 83.2 223 35.4
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 4.3e-14 82.8 224 49.6
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 5.7e-14 82.4 220 49.5
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 9.6e-14 81.6 219 44.3
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.3e-13 81.3 228 29.4
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 1.6e-13 80.9 191 51.3
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 2.1e-13 80.5 220 46.8
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 8.2e-13 78.6 225 56.0
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 1.1e-12 78.2 226 49.1
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.4e-12 77.8 220 49.5
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 1.4e-12 77.8 220 56.4
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.4e-12 77.8 225 29.8
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 1.8e-12 77.4 222 29.3
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 3.1e-12 76.6 220 50.9
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 3.4e-11 73.2 264 32.2
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 5.9e-11 72.4 216 26.9
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 7.6e-11 72.0 220 28.6
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 1.3e-10 71.2 231 36.4
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 1.7e-10 70.9 226 31.4
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.7e-10 70.9 218 26.6
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 5.0e-10 69.3 113 39.8
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 6.5e-10 68.9 227 30.8
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 2.5e-09 67.0 191 53.9
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 3.2e-09 66.6 40 82.5
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 4.2e-09 66.2 118 37.3
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 4.2e-09 66.2 40 82.5
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 5.5e-09 65.9 126 38.1
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 7.2e-09 65.5 221 29.0
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 3.6e-08 63.2 137 35.0
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 3.6e-08 63.2 219 27.9
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 4.6e-08 62.8 117 35.9
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 2.3e-07 60.5 226 47.8
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 1.1e-06 58.2 114 36.8
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.1e-06 58.2 40 70.0
Hund13295 Selenicereus undatus HOM05D007214 ORTHO05D008907 1.9e-06 57.4 155 28.4
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 5.7e-06 55.8 40 65.0
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 7.4e-06 55.5 40 65.0
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 7.4e-06 55.5 149 43.6
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 9.7e-06 55.1 39 69.2


User provided reference genes

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