Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 0.0e+00 1156.0 616 100.0
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 6.1e-136 488.8 672 49.9
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 1.3e-125 454.5 719 47.0
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 1.8e-124 450.7 638 48.3
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 3.6e-88 330.1 509 46.6
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 1.1e-87 328.6 692 38.2
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 2.4e-87 327.4 692 37.7
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 7.1e-84 315.8 710 36.6
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 2.0e-78 297.7 825 34.8
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 2.0e-78 297.7 762 34.8
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 4.9e-77 293.1 704 36.8
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 1.3e-74 285.0 642 36.6
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 1.1e-73 282.0 795 33.0
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 1.8e-71 274.6 758 34.0
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 3.2e-68 263.8 764 32.5
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 1.1e-65 255.4 492 40.0
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 6.2e-64 249.6 402 44.3
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 1.1e-63 248.8 418 42.8
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 1.4e-63 248.4 225 63.6
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.4e-63 248.4 261 56.7
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 3.1e-63 247.3 467 39.4
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 2.9e-61 240.7 468 40.8
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 1.1e-60 238.8 642 34.6
MSTRG.23496 Avicennia marina HOM05D008075 ORTHO05D010208 2.5e-60 237.7 543 39.6
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 7.1e-60 236.1 397 41.6
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.2e-59 235.3 260 55.8
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 3.5e-59 233.8 466 38.0
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 6.0e-59 233.0 214 61.7
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 6.7e-58 229.6 275 50.2
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 1.9e-57 228.0 361 42.9
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 5.7e-57 226.5 218 59.2
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 2.2e-56 224.6 219 57.5
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 2.2e-56 224.6 221 59.7
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 3.7e-56 223.8 392 44.1
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 1.4e-55 221.9 279 49.8
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 1.4e-55 221.9 210 61.0
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 2.4e-55 221.1 187 63.1
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.5e-54 218.4 292 47.3
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 2.0e-54 218.0 479 39.2
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 2.6e-54 217.6 670 31.3
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 2.6e-54 217.6 572 33.4
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 1.0e-53 215.7 594 34.3
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 2.9e-53 214.2 742 29.5
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 1.1e-52 212.2 252 51.6
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 1.4e-52 211.8 659 32.8
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 3.6e-51 207.2 270 46.7
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 4.6e-51 206.8 221 56.1
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 3.9e-50 203.8 248 48.8
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 8.7e-50 202.6 192 58.3
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 3.7e-48 197.2 308 44.8
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 4.8e-48 196.8 276 47.1
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 3.1e-47 194.1 247 51.0
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 9.1e-47 192.6 318 41.2
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 7.7e-46 189.5 245 49.0
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 1.7e-45 188.3 306 43.1
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 1.0e-42 179.1 516 32.9
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 2.5e-36 157.9 312 37.2
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 2.1e-35 154.8 240 42.1
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 2.6e-33 147.9 188 46.8
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 1.9e-28 131.7 163 44.8
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 5.7e-25 120.2 196 38.3
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.3e-24 119.0 230 37.8
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.4e-23 115.5 140 52.1
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.5e-20 105.5 279 31.9
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.5e-20 105.5 279 31.9
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 1.4e-10 72.4 151 33.1
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 1.8e-10 72.0 55 70.9
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 8.9e-10 69.7 140 32.9
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 3.4e-09 67.8 59 62.7
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 9.8e-09 66.2 144 31.2
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 8.3e-08 63.2 49 63.3
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 7.8e-06 56.6 50 56.0


User provided reference genes

Program Settings