Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00769 Erythranthe guttata HOM05D000738 ORTHO05D011926 2.9e-34 147.9 69 100.0
Migut.J01790 Erythranthe guttata HOM05D000738 ORTHO05D000675 4.6e-16 87.4 52 76.9
Hund19170 Selenicereus undatus HOM05D000738 ORTHO05D000675 8.4e-10 66.6 52 59.6
SGA_v2.0_scaffold105G30456 Striga asiatica HOM05D000738 ORTHO05D000675 1.9e-09 65.5 52 59.6
Migut.K00067 Erythranthe guttata HOM05D000738 ORTHO05D000675 3.2e-09 64.7 61 55.7
SGA_v2.0_scaffold94G28450 Striga asiatica HOM05D000738 ORTHO05D000675 4.2e-09 64.3 56 55.4
Cc06_g16510 Coffea canephora HOM05D000738 ORTHO05D000675 9.3e-09 63.2 43 65.1
FvH4_6g23080 Fragaria vesca HOM05D000738 ORTHO05D000675 2.1e-08 62.0 43 65.1
FAN05G4282 Fragaria x ananassa HOM05D000738 ORTHO05D000675 2.1e-08 62.0 43 65.1
FAN09G1318 Fragaria x ananassa HOM05D000738 ORTHO05D000675 2.1e-08 62.0 43 65.1
FAN14G5456 Fragaria x ananassa HOM05D000738 ORTHO05D000675 2.1e-08 62.0 43 65.1
RcHm_v2.0_Chr3g0480931 Rosa chinensis HOM05D000738 ORTHO05D000675 2.1e-08 62.0 43 65.1
MSTRG.26105 Avicennia marina HOM05D000738 ORTHO05D000675 2.7e-08 61.6 52 53.8
Hma1.2p1_1995F.1_g310330 Hydrangea macrophylla HOM05D000738 ORTHO05D000675 2.7e-08 61.6 52 55.8
SalBow6G3513 Salvia bowleyana HOM05D000738 ORTHO05D000675 2.7e-08 61.6 49 59.2
MSTRG.10827 Avicennia marina HOM05D000738 ORTHO05D000675 3.5e-08 61.2 52 55.8
MSTRG.6455 Avicennia marina HOM05D000738 ORTHO05D000675 3.5e-08 61.2 56 55.4
Dinv18092 Davidia involucrata HOM05D000738 ORTHO05D000675 3.5e-08 61.2 43 62.8
ECA248G3361 Erigeron canadensis HOM05D000738 ORTHO05D000675 3.5e-08 61.2 52 53.8
SalBow1G8417 Salvia bowleyana HOM05D000738 ORTHO05D000675 3.5e-08 61.2 52 55.8
HanXRQChr01g0008431 Helianthus annuus HOM05D000738 ORTHO05D000675 7.9e-08 60.1 52 51.9
Actinidia09363 Actinidia chinensis HOM05D000738 ORTHO05D000675 1.0e-07 59.7 52 53.8
EL10Ac3g06992 Beta vulgaris HOM05D000738 ORTHO05D000675 1.0e-07 59.7 52 55.8
MD12G1065800 Malus domestica HOM05D000738 ORTHO05D000675 1.0e-07 59.7 52 53.8
Actinidia20287 Actinidia chinensis HOM05D000738 ORTHO05D000675 1.3e-07 59.3 52 53.8
MD14G1065800 Malus domestica HOM05D000738 ORTHO05D000675 1.3e-07 59.3 43 60.5
Nitab4.5_0000452g0100 Nicotiana tabacum HOM05D000738 ORTHO05D000675 1.3e-07 59.3 43 60.5
Nitab4.5_0003074g0020 Nicotiana tabacum HOM05D000738 ORTHO05D000675 1.3e-07 59.3 43 60.5
Peaxi162Scf00189g00525 Petunia axillaris HOM05D000738 ORTHO05D000675 1.3e-07 59.3 43 60.5
Potri.006G056300 Populus trichocarpa HOM05D000738 ORTHO05D000675 1.3e-07 59.3 52 55.8
unitig_736.g22291 Utricularia gibba HOM05D000738 ORTHO05D000675 1.3e-07 59.3 41 61.0
Oeu008123.1 Olea europaea HOM05D000738 ORTHO05D000675 1.8e-07 58.9 52 53.8
Potri.016G051900 Populus trichocarpa HOM05D000738 ORTHO05D000675 1.8e-07 58.9 52 53.8
Sabra16G0055500 Salix brachista HOM05D000738 ORTHO05D004372 1.8e-07 58.9 52 55.8
Sed0013343 Sechium edule HOM05D000738 ORTHO05D000675 1.8e-07 58.9 49 55.1
vmacro07871 Vaccinium macrocarpon HOM05D000738 ORTHO05D000675 1.8e-07 58.9 52 51.9
Cfa016872 Carpinus fangiana HOM05D000738 ORTHO05D000675 2.3e-07 58.5 43 60.5
Lsat_1_v5_gn_5_163821 Lactuca sativa HOM05D000738 ORTHO05D000675 2.3e-07 58.5 43 55.8
PGSC0003DMG400033929 Solanum tuberosum HOM05D000738 ORTHO05D000675 2.3e-07 58.5 43 58.1
CSS0039295 Camellia sinensis var. sinensis HOM05D000738 ORTHO05D000675 3.0e-07 58.2 52 51.9
CiPaw.10G030500 Carya illinoinensis HOM05D000738 ORTHO05D000675 3.0e-07 58.2 43 58.1
ClCG04G000580 Citrullus lanatus HOM05D000738 ORTHO05D000675 3.0e-07 58.2 49 55.1
COL.COLO4_28710 Corchorus olitorius HOM05D000738 ORTHO05D000675 3.0e-07 58.2 43 60.5
MELO3C009063.2 Cucumis melo HOM05D000738 ORTHO05D000675 3.0e-07 58.2 49 55.1
CsaV3_4G031440 Cucumis sativus L. HOM05D000738 ORTHO05D000675 3.0e-07 58.2 49 55.1
Eucgr.A02404 Eucalyptus grandis HOM05D000738 ORTHO05D000675 3.0e-07 58.2 43 60.5
Gohir.D09G121500 Gossypium hirsutum HOM05D000738 ORTHO05D000675 3.0e-07 58.2 43 60.5
Gorai.006G139000 Gossypium raimondii HOM05D000738 ORTHO05D000675 3.0e-07 58.2 43 60.5
Lj7C597T25 Lonicera japonica HOM05D000738 ORTHO05D000675 3.0e-07 58.2 52 53.8
MBI01_g27618_MAGBIO Magnolia biondii HOM05D000738 ORTHO05D000675 3.0e-07 58.2 43 58.1
AUR62025969 Chenopodium quinoa HOM05D000738 ORTHO05D000675 3.9e-07 57.8 52 53.8
Prupe.7G068700 Prunus persica HOM05D000738 ORTHO05D000675 3.9e-07 57.8 52 51.9
Rhsim03G0011700 Rhododendron simsii HOM05D000738 ORTHO05D000675 3.9e-07 57.8 52 50.0
Ciclev10004527m.g Citrus clementina HOM05D000738 ORTHO05D000675 5.1e-07 57.4 43 58.1
PGR004G0104 Punica granatum HOM05D000738 ORTHO05D000675 5.1e-07 57.4 43 60.5
Atru.chr1.971 Acer truncatum HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 58.1
Atru.chr1.999 Acer truncatum HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 58.1
AUR62000097 Chenopodium quinoa HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 55.8
AUR62019271 Chenopodium quinoa HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 55.8
Ciclev10015011m.g Citrus clementina HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 58.1
Duzib093G0290 Durio zibethinus HOM05D000738 ORTHO05D000675 6.7e-07 57.0 52 51.9
Migut.D00579 Erythranthe guttata HOM05D000738 ORTHO05D000675 6.7e-07 57.0 52 51.9
Glyma.03G140100 Glycine max HOM05D000738 ORTHO05D000675 6.7e-07 57.0 52 51.9
Gohir.D01G186000 Gossypium hirsutum HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 58.1
Gorai.002G229400 Gossypium raimondii HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 58.1
Lalb_Chr20g0110931 Lupinus albus HOM05D000738 ORTHO05D000675 6.7e-07 57.0 43 58.1
MBI11_g00135_MAGBIO Magnolia biondii HOM05D000738 ORTHO05D011926 6.7e-07 57.0 43 58.1
Phvul.001G137000 Phaseolus vulgaris HOM05D000738 ORTHO05D000675 6.7e-07 57.0 52 51.9
VMungo1383G1315 Vigna mungo HOM05D000738 ORTHO05D000675 6.7e-07 57.0 52 51.9
BcaB04g21090 Brassica carinata HOM05D000738 ORTHO05D000675 8.7e-07 56.6 43 51.2
HanXRQChr13g0390641 Helianthus annuus HOM05D000738 ORTHO05D000675 8.7e-07 56.6 43 53.5
Oeu043300.3 Olea europaea HOM05D000738 ORTHO05D000675 8.7e-07 56.6 43 58.1
Potri.003G205400 Populus trichocarpa HOM05D000738 ORTHO05D000675 8.7e-07 56.6 43 58.1
Sabra01G0013300 Salix brachista HOM05D000738 ORTHO05D000675 8.7e-07 56.6 43 58.1
Sc19g0006830 Simmondsia chinensis HOM05D000738 ORTHO05D000675 8.7e-07 56.6 52 53.8
Sc19g0006850 Simmondsia chinensis HOM05D000738 ORTHO05D000675 8.7e-07 56.6 52 53.8
GSVIVG01033338001 Vitis vinifera HOM05D000738 ORTHO05D000675 8.7e-07 56.6 52 51.9
Atru.chr3.2596 Acer truncatum HOM05D000738 ORTHO05D000675 1.1e-06 56.2 52 50.0
Aa31LG3G6440 Aethionema arabicum HOM05D000738 ORTHO05D000675 1.1e-06 56.2 52 48.1
Aa31sc1453G10 Aethionema arabicum HOM05D000738 ORTHO05D000675 1.1e-06 56.2 52 48.1
Cpa.g.sc84.79 Carica papaya HOM05D000738 ORTHO05D000675 1.1e-06 56.2 43 58.1
Sed0010581 Sechium edule HOM05D000738 ORTHO05D000675 1.1e-06 56.2 49 55.1
Solyc03g059250.3 Solanum lycopersicum HOM05D000738 ORTHO05D000675 1.1e-06 56.2 43 55.8
Solyc10g080390.2 Solanum lycopersicum HOM05D000738 ORTHO05D000675 1.1e-06 56.2 52 51.9
Sopen03g013600 Solanum pennellii HOM05D000738 ORTHO05D000675 1.1e-06 56.2 43 55.8
Sopen10g030930 Solanum pennellii HOM05D000738 ORTHO05D000675 1.1e-06 56.2 52 51.9
PGSC0003DMG401023679 Solanum tuberosum HOM05D000738 ORTHO05D000675 1.1e-06 56.2 52 51.9
Thecc.09G228100 Theobroma cacao HOM05D000738 ORTHO05D000675 1.1e-06 56.2 49 53.1
Ah.06g193650 Amaranthus hybridus HOM05D000738 ORTHO05D000675 1.5e-06 55.8 43 53.5
arahy.Tifrunner.gnm1.ann1.3QQJ98 Arachis hypogaea HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 51.9
arahy.Tifrunner.gnm1.ann1.TH8WCF Arachis hypogaea HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 51.9
Carub.0003s1157 Capsella rubella HOM05D000738 ORTHO05D000675 1.5e-06 55.8 43 48.8
CiPaw.13G163400 Carya illinoinensis HOM05D000738 ORTHO05D000675 1.5e-06 55.8 43 55.8
Ca_08486_v3 Cicer arietinum L. HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 50.0
Duzib106G1391 Durio zibethinus HOM05D000738 ORTHO05D000675 1.5e-06 55.8 43 55.8
Glyma.19G143000 Glycine max HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 50.0
Lj1g0022537 Lotus japonicus HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 50.0
Manes.09G029900 Manihot esculenta HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 53.8
Oeu001034.2 Olea europaea HOM05D000738 ORTHO05D011926 1.5e-06 55.8 43 55.8
QL01p005282 Quercus lobata HOM05D000738 ORTHO05D000675 1.5e-06 55.8 43 55.8
Sabra06G0039800 Salix brachista HOM05D000738 ORTHO05D004372 1.5e-06 55.8 52 53.8
Hund07533 Selenicereus undatus HOM05D000738 ORTHO05D000675 1.5e-06 55.8 43 53.5
THA.LOC104819141 Tarenaya hassleriana HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 50.0
TPR.G3887 Trifolium pratense HOM05D000738 ORTHO05D000675 1.5e-06 55.8 52 50.0
Aqoxy1G00216 Aquilegia oxysepala HOM05D000738 ORTHO05D000675 1.9e-06 55.5 52 51.9
Cfa009736 Carpinus fangiana HOM05D000738 ORTHO05D000675 1.9e-06 55.5 43 55.8
Manes.06G166700 Manihot esculenta HOM05D000738 ORTHO05D000675 1.9e-06 55.5 43 58.1
Nitab4.5_0008868g0030 Nicotiana tabacum HOM05D000738 ORTHO05D000675 1.9e-06 55.5 43 55.8
Potri.001G018700 Populus trichocarpa HOM05D000738 ORTHO05D000675 1.9e-06 55.5 43 55.8
Actinidia06887 Actinidia chinensis HOM05D000738 ORTHO05D000675 2.5e-06 55.1 43 58.1
CANSAT80G0761 Cannabis sativa HOM05D000738 ORTHO05D000675 2.5e-06 55.1 52 51.9
DCAR_013574 Daucus carota HOM05D000738 ORTHO05D000675 2.5e-06 55.1 43 51.2
Sc16g0011580 Simmondsia chinensis HOM05D000738 ORTHO05D000675 2.5e-06 55.1 43 53.5
Zm00001eb146890 Zea mays HOM05D000738 ORTHO05D000675 2.5e-06 55.1 49 49.0
COL.COLO4_24847 Corchorus olitorius HOM05D000738 ORTHO05D000675 3.3e-06 54.7 52 51.9
Sp3g10430 Schrenkiella parvula HOM05D000738 ORTHO05D000675 3.3e-06 54.7 43 51.2
Hund24748 Selenicereus undatus HOM05D000738 ORTHO05D000675 3.3e-06 54.7 52 51.9
Sopen11g023760 Solanum pennellii HOM05D000738 ORTHO05D000675 3.3e-06 54.7 43 55.8
arahy.Tifrunner.gnm1.ann1.BFQ1HQ Arachis hypogaea HOM05D000738 ORTHO05D000675 4.3e-06 54.3 49 49.0
arahy.Tifrunner.gnm1.ann1.G3V4L7 Arachis hypogaea HOM05D000738 ORTHO05D000675 4.3e-06 54.3 49 49.0
AUR62024385 Chenopodium quinoa HOM05D000738 ORTHO05D000675 4.3e-06 54.3 52 51.9
Medtr4g051648 Medicago truncatula HOM05D000738 ORTHO05D000675 4.3e-06 54.3 43 51.2
QL07p021913 Quercus lobata HOM05D000738 ORTHO05D000675 4.3e-06 54.3 43 53.5
Sed0000317 Sechium edule HOM05D000738 ORTHO05D000675 4.3e-06 54.3 49 46.9
TWI31G1392 Tripterygium wilfordii HOM05D000738 ORTHO05D000675 4.3e-06 54.3 49 46.9
TAR623G1326 Trochodendron aralioides HOM05D000738 ORTHO05D000675 4.3e-06 54.3 43 55.8
TAR623G1363 Trochodendron aralioides HOM05D000738 ORTHO05D000675 4.3e-06 54.3 43 55.8
GSVIVG01025304001 Vitis vinifera HOM05D000738 ORTHO05D000675 4.3e-06 54.3 52 50.0
Ah.15g100070 Amaranthus hybridus HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 51.2
EL10Ac4g09111 Beta vulgaris HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 53.5
CAN.G689.11 Capsicum annuum HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 51.2
CARHR086770 Cardamine hirsuta HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 44.2
AUR62001028 Chenopodium quinoa HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 53.5
AUR62004924 Chenopodium quinoa HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 53.5
Thhalv10020364m.g Eutrema salsugineum HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 46.5
Gorai.004G018800 Gossypium raimondii HOM05D000738 ORTHO05D000675 5.6e-06 53.9 52 51.9
Nn7g36177 Nelumbo nucifera HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 55.8
Nitab4.5_0004063g0020 Nicotiana tabacum HOM05D000738 ORTHO05D000675 5.6e-06 53.9 52 51.9
Peaxi162Scf00029g03217 Petunia axillaris HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 55.8
PGR119G2358 Punica granatum HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 55.8
Rhsim13G0223900 Rhododendron simsii HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 55.8
Hund06959 Selenicereus undatus HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 53.5
TAR369G0947 Trochodendron aralioides HOM05D000738 ORTHO05D000675 5.6e-06 53.9 43 53.5
AL5G22270 Arabidopsis lyrata HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
AT3G44200 Arabidopsis thaliana HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
BcaC01g02021 Brassica carinata HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
BcaC05g28198 Brassica carinata HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 55.8
A05p27860 Brassica napus HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 55.8
A06p22110 Brassica napus HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
C05p43200 Brassica napus HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 55.8
BolC5t33050H Brassica oleracea HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 55.8
BraA05t21673Z Brassica rapa HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 55.8
BraA06t25302Z Brassica rapa HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
Ca_02490_v3 Cicer arietinum L. HOM05D000738 ORTHO05D011926 7.4e-06 53.5 56 42.9
Duzib168G2329 Durio zibethinus HOM05D000738 ORTHO05D000675 7.4e-06 53.5 52 50.0
Eucgr.B03821 Eucalyptus grandis HOM05D000738 ORTHO05D000675 7.4e-06 53.5 56 44.6
Gohir.A08G013100 Gossypium hirsutum HOM05D000738 ORTHO05D000675 7.4e-06 53.5 52 50.0
Gohir.D08G023500 Gossypium hirsutum HOM05D000738 ORTHO05D000675 7.4e-06 53.5 52 50.0
Lalb_Chr25g0287481 Lupinus albus HOM05D000738 ORTHO05D000675 7.4e-06 53.5 52 46.2
Os05g0440800 Oryza sativa ssp. japonica HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
PSO384G1117 Papaver somniferum HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 53.5
SEGI_14405 Sequoiadendron giganteum HOM05D000738 ORTHO05D000675 7.4e-06 53.5 49 44.9
Solyc11g071970.2 Solanum lycopersicum HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
Sopen11g029640 Solanum pennellii HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
PGSC0003DMG402002977 Solanum tuberosum HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
THA.LOC104799564 Tarenaya hassleriana HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
Zm00001eb288850 Zea mays HOM05D000738 ORTHO05D000675 7.4e-06 53.5 43 51.2
Ca_01638_v3 Cicer arietinum L. HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
Gohir.D09G097900 Gossypium hirsutum HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
Gorai.006G114800 Gossypium raimondii HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
Lj3g0012101 Lotus japonicus HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
Nitab4.5_0001347g0070 Nicotiana tabacum HOM05D000738 ORTHO05D000675 9.6e-06 53.1 52 51.9
Psat0s499g0080 Pisum sativum HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
Psat3g071040 Pisum sativum HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 53.5
Psat5g260480 Pisum sativum HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
Psat7g186200 Pisum sativum HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
SpUn0001_0700 Schrenkiella parvula HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 51.2
SEGI_22905 Sequoiadendron giganteum HOM05D000738 ORTHO05D000675 9.6e-06 53.1 49 42.9
THA.LOC104817900 Tarenaya hassleriana HOM05D000738 ORTHO05D000675 9.6e-06 53.1 52 48.1
TPR.G4651 Trifolium pratense HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 48.8
unitig_26.g9500 Utricularia gibba HOM05D000738 ORTHO05D000675 9.6e-06 53.1 43 51.2


User provided reference genes

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