Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 3.5e-258 894.4 448 100.0
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.3e-212 743.0 471 80.7
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.3e-212 743.0 452 82.3
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.2e-210 736.5 455 82.0
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 2.1e-210 735.7 455 81.5
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 2.7e-210 735.3 455 81.3
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 7.9e-210 733.8 458 81.9
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 7.9e-210 733.8 457 80.3
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.8e-209 732.6 459 81.7
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.3e-209 732.3 457 80.7
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 5.1e-209 731.1 457 81.0
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 6.7e-209 730.7 457 80.7
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 8.8e-209 730.3 455 81.5
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 2.6e-208 728.8 457 81.6
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 4.4e-208 728.0 458 81.0
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 5.7e-208 727.6 449 82.0
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 9.7e-208 726.9 454 80.2
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.7e-207 726.1 462 80.1
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.7e-207 726.1 449 81.3
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 3.7e-207 724.9 458 80.3
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 1.1e-206 723.4 454 80.8
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.8e-206 722.6 458 79.9
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.4e-206 722.2 452 80.1
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 3.1e-206 721.8 457 80.3
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 9.1e-206 720.3 461 79.0
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 4.5e-205 718.0 457 80.5
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 5.9e-205 717.6 453 80.1
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.0e-204 716.8 473 77.6
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.3e-204 716.5 455 79.1
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.2e-204 715.7 473 77.6
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 2.9e-204 715.3 452 79.2
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.9e-204 715.3 457 79.9
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 3.2e-203 711.8 462 79.4
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 9.4e-203 710.3 461 78.7
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 9.4e-203 710.3 459 78.9
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.6e-202 709.5 462 79.0
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.6e-202 709.5 453 78.8
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 3.6e-202 708.4 457 79.2
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.1e-202 707.6 410 84.6
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 6.1e-202 707.6 461 78.3
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 6.1e-202 707.6 454 80.0
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.0e-201 706.8 456 79.4
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.0e-201 706.8 453 79.0
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 1.4e-201 706.4 462 79.7
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 3.0e-201 705.3 459 78.2
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 3.0e-201 705.3 454 78.0
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 1.5e-200 703.0 460 77.6
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 3.3e-200 701.8 437 81.2
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 4.4e-200 701.4 406 84.7
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 4.4e-200 701.4 458 79.3
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 7.4e-200 700.7 450 77.6
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 9.7e-200 700.3 437 80.8
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.7e-199 699.5 457 77.9
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.7e-199 699.5 458 78.2
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 2.2e-199 699.1 455 77.8
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.7e-199 698.4 454 77.5
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 6.3e-199 697.6 453 77.7
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.1e-198 696.8 452 76.5
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.8e-198 696.0 451 77.4
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 4.1e-198 694.9 455 78.0
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 1.2e-197 693.3 462 77.1
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.5e-197 691.4 460 77.0
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.3e-196 689.9 462 76.8
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 1.3e-196 689.9 451 77.4
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.7e-196 689.5 457 77.2
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 1.1e-195 686.8 458 76.0
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.5e-195 686.4 457 77.7
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.9e-195 686.0 520 70.6
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.5e-195 685.6 475 75.2
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 4.2e-195 684.9 460 75.9
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 5.5e-195 684.5 453 77.0
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.2e-194 683.3 394 84.5
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 2.1e-194 682.6 452 77.0
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 2.7e-194 682.2 452 76.8
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.7e-194 682.2 461 76.1
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 4.4e-192 674.9 460 75.4
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.7e-191 672.9 457 75.9
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 2.2e-191 672.5 459 75.2
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 4.8e-191 671.4 409 80.0
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 6.3e-191 671.0 457 75.7
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 8.2e-191 670.6 455 75.4
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 2.9e-188 662.1 358 89.4
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.8e-188 661.8 357 90.5
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.8e-188 661.8 462 75.3
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 4.2e-187 658.3 462 75.5
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.0e-185 652.1 455 74.5
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.1e-182 643.7 451 75.4
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 4.5e-181 638.3 370 83.2
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.3e-177 625.9 452 72.1
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 3.7e-175 618.6 412 73.5
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 8.6e-172 607.4 332 88.9
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.6e-168 595.9 332 87.7
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 7.3e-163 577.8 409 68.9
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 6.2e-162 574.7 444 64.6
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.8e-161 573.2 458 67.9
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 3.1e-161 572.4 399 70.9
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 4.7e-154 548.5 355 79.2
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 4.4e-152 542.0 381 75.1
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.7e-151 538.9 357 76.2
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 2.4e-150 536.2 407 65.8
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 9.2e-150 534.3 350 78.6
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 3.8e-143 512.3 279 90.7
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 9.0e-137 491.1 298 81.5
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.3e-135 487.3 406 61.1
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 2.8e-130 469.5 311 77.8
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 9.3e-126 454.5 332 70.8
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.7e-125 453.0 364 66.5
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 6.0e-125 451.8 236 91.5
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 6.0e-125 451.8 236 91.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.1e-123 447.6 269 80.3
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.8e-122 443.0 398 60.1
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 4.0e-113 412.5 412 50.2
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 5.0e-95 352.4 242 76.0
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 8.3e-74 282.0 318 46.5
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 2.6e-59 233.8 337 40.9
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.1e-57 226.5 402 36.8
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.7e-50 203.4 380 35.3
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.2e-48 198.4 117 82.1
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.9e-47 193.4 341 34.9
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 1.2e-45 188.3 349 34.7
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 6.8e-44 182.6 102 84.3
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 4.9e-42 176.4 150 62.7
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.3e-42 175.6 100 85.0
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 6.0e-40 169.5 373 31.4
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 2.5e-38 164.1 92 89.1
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.8e-36 157.9 153 58.8
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 4.8e-21 106.7 51 92.2
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 2.5e-14 84.3 45 95.6
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 2.8e-13 80.9 104 50.0
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 1.2e-08 65.5 41 78.0
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.6e-08 65.1 42 78.6
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 7.4e-06 56.2 160 25.0


User provided reference genes

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