Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 3.1e-101 371.7 178 100.0
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 1.1e-74 283.5 178 78.7
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 9.5e-74 280.4 173 78.6
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 2.1e-73 279.3 170 78.8
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 6.0e-68 261.2 175 72.6
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 8.6e-67 257.3 170 71.8
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 1.5e-66 256.5 163 73.0
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 3.3e-66 255.4 170 71.2
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 4.3e-66 255.0 171 70.2
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 1.2e-65 253.4 163 73.6
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 8.1e-65 250.8 173 68.8
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 8.1e-65 250.8 166 70.5
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 8.1e-65 250.8 177 66.7
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 1.1e-64 250.4 167 70.1
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.4e-64 250.0 165 72.1
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 2.4e-64 249.2 169 70.4
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 3.1e-64 248.8 171 72.5
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 5.2e-64 248.1 165 72.7
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 9.0e-64 247.3 176 68.2
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 9.0e-64 247.3 165 71.5
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 1.2e-63 246.9 168 70.8
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 1.5e-63 246.5 165 69.1
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 2.0e-63 246.1 164 67.7
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 2.0e-63 246.1 171 69.0
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 2.6e-63 245.7 153 76.5
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 2.6e-63 245.7 166 71.1
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 2.6e-63 245.7 171 70.2
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 2.6e-63 245.7 166 71.1
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 2.6e-63 245.7 170 69.4
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 3.4e-63 245.4 170 69.4
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 3.4e-63 245.4 162 70.4
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 3.4e-63 245.4 154 74.7
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 4.4e-63 245.0 173 68.8
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 4.4e-63 245.0 178 68.5
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 4.4e-63 245.0 168 70.2
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 5.8e-63 244.6 172 69.2
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 7.6e-63 244.2 151 76.2
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 7.6e-63 244.2 166 71.7
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 9.9e-63 243.8 171 68.4
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 9.9e-63 243.8 170 69.4
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 9.9e-63 243.8 156 73.7
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 1.3e-62 243.4 169 71.0
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 1.7e-62 243.0 171 67.8
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 2.2e-62 242.7 165 69.1
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 2.2e-62 242.7 152 75.0
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 2.9e-62 242.3 171 69.0
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 4.9e-62 241.5 170 68.2
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 4.9e-62 241.5 174 67.8
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 6.4e-62 241.1 164 70.1
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 1.1e-61 240.4 174 67.8
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 1.1e-61 240.4 170 70.6
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 1.4e-61 240.0 156 73.1
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 1.4e-61 240.0 164 69.5
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 1.4e-61 240.0 170 68.2
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 1.9e-61 239.6 169 68.0
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 2.4e-61 239.2 163 68.1
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 4.2e-61 238.4 161 69.6
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 5.4e-61 238.0 154 73.4
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 7.1e-61 237.7 167 68.3
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 7.1e-61 237.7 166 68.7
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 1.2e-60 236.9 169 66.9
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 2.1e-60 236.1 169 70.4
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 2.1e-60 236.1 157 70.1
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 6.0e-60 234.6 161 69.6
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 7.8e-60 234.2 161 68.9
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 1.7e-59 233.0 165 67.9
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 2.3e-59 232.6 172 68.0
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 3.9e-59 231.9 156 69.2
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 6.6e-59 231.1 169 68.6
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 6.6e-59 231.1 169 68.6
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 6.6e-59 231.1 170 64.1
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.5e-58 229.9 168 63.7
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.5e-58 229.2 174 63.8
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 4.3e-58 228.4 149 70.5
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 4.3e-58 228.4 169 67.5
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 7.3e-58 227.6 155 67.1
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 1.3e-57 226.9 170 67.1
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.1e-57 226.1 169 66.9
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 2.8e-57 225.7 156 70.5
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 1.1e-56 223.8 151 72.8
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 1.1e-56 223.8 149 70.5
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.4e-56 223.4 161 68.9
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 1.4e-56 223.4 192 58.9
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 5.3e-56 221.5 178 63.5
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 5.3e-56 221.5 163 63.2
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 6.9e-56 221.1 172 63.4
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.1e-50 203.8 175 60.0
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 1.1e-50 203.8 152 59.2
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 5.6e-50 201.4 155 66.5
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 4.8e-49 198.4 165 63.0
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 6.2e-49 198.0 123 74.8
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 2.6e-47 192.6 161 60.2
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 7.1e-45 184.5 133 67.7
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 2.1e-44 183.0 121 71.1
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 3.9e-43 178.7 166 54.8
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 3.9e-43 178.7 119 68.9
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 6.7e-43 177.9 139 61.2
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 6.7e-43 177.9 150 54.0
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 8.2e-41 171.0 157 52.2
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 9.3e-37 157.5 160 53.8
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 4.6e-36 155.2 154 53.2
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 1.1e-34 150.6 110 67.3
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 3.2e-29 132.5 87 74.7
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 7.9e-28 127.9 73 79.5
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-27 124.4 92 59.8
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 7.4e-26 121.3 120 53.3
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 1.3e-25 120.6 78 71.8
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 6.1e-12 75.1 46 76.1
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 1.1e-10 70.9 43 74.4
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 1.1e-10 70.9 48 64.6
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 7.4e-10 68.2 51 62.7
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 2.4e-08 63.2 80 42.5
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 5.9e-07 58.5 41 63.4
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.3e-06 57.4 47 57.4


User provided reference genes

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