Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00631 Erythranthe guttata HOM05D000361 ORTHO05D004243 2.4e-45 185.3 104 100.0
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 5.4e-37 157.5 92 96.7
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 7.1e-29 130.6 91 78.0
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 1.0e-27 126.7 91 76.9
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 1.3e-27 126.3 92 79.3
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 2.3e-27 125.6 92 78.3
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 3.0e-27 125.2 92 79.3
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.9e-27 124.8 88 77.3
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 8.7e-27 123.6 92 77.2
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 1.9e-26 122.5 93 73.1
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.9e-26 122.5 86 76.7
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 1.9e-26 122.5 86 76.7
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 4.3e-26 121.3 91 74.7
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 4.3e-26 121.3 91 73.6
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 4.3e-26 121.3 88 75.0
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 5.7e-26 120.9 91 73.6
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 1.3e-25 119.8 91 73.6
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.3e-25 119.8 91 73.6
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 1.3e-25 119.8 91 73.6
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 2.1e-25 119.0 91 72.5
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.7e-25 118.2 91 71.4
unitig_736.g22937 Utricularia gibba HOM05D000361 ORTHO05D004243 4.8e-25 117.9 84 78.6
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 8.2e-25 117.1 92 72.8
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 2.4e-24 115.5 92 71.7
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 3.1e-24 115.2 91 71.4
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 4.1e-24 114.8 91 70.3
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 4.1e-24 114.8 91 70.3
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 5.3e-24 114.4 91 69.2
DCAR_005759 Daucus carota HOM05D000361 ORTHO05D004243 6.9e-24 114.0 91 68.1
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 9.0e-24 113.6 83 75.9
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 9.0e-24 113.6 91 71.4
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 1.5e-23 112.8 91 67.0
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 2.0e-23 112.5 91 69.2
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 2.6e-23 112.1 91 71.4
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.6e-23 112.1 91 71.4
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 3.4e-23 111.7 91 70.3
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 4.5e-23 111.3 91 68.1
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 5.8e-23 110.9 91 68.1
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 5.8e-23 110.9 91 70.3
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 1.0e-22 110.2 90 68.9
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.3e-22 109.8 88 73.9
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 2.2e-22 109.0 91 67.0
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 6.5e-22 107.5 92 65.2
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 6.5e-22 107.5 88 68.2
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 6.5e-22 107.5 91 68.1
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 8.4e-22 107.1 91 63.7
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 8.4e-22 107.1 92 65.2
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 8.4e-22 107.1 91 65.9
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 8.4e-22 107.1 91 67.0
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 1.1e-21 106.7 91 68.1
Atru.chr5.1002 Acer truncatum HOM05D000361 ORTHO05D004243 1.4e-21 106.3 91 63.7
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 1.4e-21 106.3 91 67.0
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 1.4e-21 106.3 91 64.8
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.9e-21 105.9 91 64.8
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 2.5e-21 105.5 91 68.1
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 2.5e-21 105.5 91 67.0
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 2.5e-21 105.5 91 67.0
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 3.2e-21 105.1 127 56.7
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 3.2e-21 105.1 106 59.4
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 3.2e-21 105.1 91 68.1
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 4.2e-21 104.8 91 65.9
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 5.5e-21 104.4 91 64.8
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 5.5e-21 104.4 91 64.8
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 5.5e-21 104.4 91 64.8
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 7.2e-21 104.0 91 64.8
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 9.3e-21 103.6 86 69.8
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 9.3e-21 103.6 91 64.8
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 1.2e-20 103.2 84 67.9
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 1.6e-20 102.8 91 62.6
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 2.1e-20 102.4 88 67.0
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.1e-20 102.4 91 64.8
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 2.7e-20 102.1 84 69.0
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 3.5e-20 101.7 91 65.9
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 4.6e-20 101.3 91 63.7
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 4.6e-20 101.3 88 64.8
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 4.6e-20 101.3 92 62.0
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 7.9e-20 100.5 91 65.9
Lalb_Chr15g0078151 Lupinus albus HOM05D000361 ORTHO05D004243 7.9e-20 100.5 88 62.5
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 1.0e-19 100.1 91 63.7
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 1.3e-19 99.8 92 62.0
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 1.3e-19 99.8 91 62.6
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.8e-19 99.4 91 64.8
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 2.3e-19 99.0 91 63.7
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 3.0e-19 98.6 91 62.6
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 1.5e-18 96.3 86 64.0
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 1.5e-18 96.3 86 62.8
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 1.5e-18 96.3 87 64.4
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 2.5e-18 95.5 106 59.4
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 3.3e-18 95.1 91 63.7
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 5.7e-18 94.4 91 59.3
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 7.4e-18 94.0 91 57.1
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 1.3e-17 93.2 91 58.2
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.3e-17 93.2 91 58.2
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 2.2e-17 92.4 91 57.1
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.2e-17 92.4 91 58.2
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 2.8e-17 92.0 91 57.1
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 3.7e-17 91.7 91 57.1
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 3.7e-17 91.7 91 57.1
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 3.7e-17 91.7 91 59.3
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 3.7e-17 91.7 92 67.4
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 4.8e-17 91.3 91 57.1
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 4.8e-17 91.3 91 57.1
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 1.1e-16 90.1 91 56.0
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 1.1e-16 90.1 91 57.1
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 3.1e-16 88.6 84 58.3
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 3.1e-16 88.6 89 55.1
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 4.1e-16 88.2 91 54.9
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 4.1e-16 88.2 91 54.9
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 4.1e-16 88.2 91 54.9
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 4.1e-16 88.2 91 54.9
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 9.0e-16 87.0 88 62.5
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 9.0e-16 87.0 91 53.8
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 1.2e-15 86.7 91 53.8
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 1.5e-15 86.3 89 53.9
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.0e-15 85.9 84 58.3
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 2.0e-15 85.9 84 58.3
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 3.4e-15 85.1 84 56.0
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 7.7e-15 84.0 91 51.6
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 2.9e-14 82.0 85 52.9
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.9e-13 79.3 84 53.6
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 1.9e-13 79.3 91 48.4
Gorai.008G140000 Gossypium raimondii HOM05D000361 ORTHO05D004243 7.2e-13 77.4 77 57.1
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 2.1e-12 75.9 113 45.1
SEGI_20894 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 1.0e-11 73.6 86 48.8
MD11G1314200 Malus domestica HOM05D000361 ORTHO05D004243 1.4e-11 73.2 48 75.0
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 1.1e-10 70.1 85 50.6
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 5.7e-10 67.8 84 50.0
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea HOM05D000361 ORTHO05D004243 3.7e-09 65.1 71 52.1
ClCG10G006380 Citrullus lanatus HOM05D000361 ORTHO05D004243 3.7e-09 65.1 101 43.6
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 4.8e-09 64.7 84 48.8
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea HOM05D000361 ORTHO05D004243 6.3e-09 64.3 71 50.7
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.4e-08 63.2 77 50.6
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 1.8e-08 62.8 86 44.2
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 2.4e-08 62.4 40 75.0
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 9.1e-08 60.5 83 44.6
Ca_09209_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 2.0e-07 59.3 68 51.5


User provided reference genes

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