Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 2.6e-49 198.4 98 100.0
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 1.3e-24 116.3 104 59.6
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 1.4e-21 106.3 100 61.0
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 1.4e-21 106.3 100 61.0
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 4.4e-20 101.3 94 60.6
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 1.6e-17 92.8 108 53.7
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 5.9e-17 90.9 87 56.3
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 7.7e-17 90.5 52 80.8
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 7.7e-17 90.5 107 52.3
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 1.3e-16 89.7 70 70.0
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 2.2e-16 89.0 101 52.5
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 2.9e-16 88.6 77 57.1
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 3.8e-16 88.2 52 78.8
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 3.8e-16 88.2 52 78.8
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 3.8e-16 88.2 52 78.8
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 6.5e-16 87.4 62 71.0
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 1.1e-15 86.7 100 55.0
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.1e-15 86.7 52 78.8
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 1.5e-15 86.3 99 50.5
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 2.5e-15 85.5 92 50.0
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 2.5e-15 85.5 92 50.0
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 2.5e-15 85.5 108 45.4
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 3.2e-15 85.1 62 69.4
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 5.5e-15 84.3 88 53.4
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 7.2e-15 84.0 101 52.5
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 9.4e-15 83.6 107 48.6
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 9.4e-15 83.6 98 51.0
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 9.4e-15 83.6 85 50.6
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.2e-14 83.2 113 46.9
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 1.6e-14 82.8 97 51.5
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 2.1e-14 82.4 90 54.4
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 2.7e-14 82.0 95 50.5
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 4.7e-14 81.3 97 46.4
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 4.7e-14 81.3 76 59.2
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 4.7e-14 81.3 76 59.2
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 4.7e-14 81.3 105 46.7
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 4.7e-14 81.3 75 62.7
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 4.7e-14 81.3 75 62.7
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 4.7e-14 81.3 97 46.4
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 8.0e-14 80.5 63 61.9
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 8.0e-14 80.5 69 60.9
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 8.0e-14 80.5 109 49.5
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 1.0e-13 80.1 117 42.7
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 1.0e-13 80.1 103 45.6
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 1.0e-13 80.1 90 53.3
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.0e-13 80.1 109 48.6
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 1.0e-13 80.1 104 50.0
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 1.0e-13 80.1 90 52.2
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 1.4e-13 79.7 94 47.9
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 1.4e-13 79.7 105 47.6
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 1.8e-13 79.3 80 55.0
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 2.3e-13 79.0 68 61.8
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 2.3e-13 79.0 107 46.7
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 3.0e-13 78.6 46 73.9
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 3.0e-13 78.6 115 47.8
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 3.0e-13 78.6 78 60.3
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 4.0e-13 78.2 48 72.9
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 5.2e-13 77.8 102 48.0
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 6.8e-13 77.4 62 61.3
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.5e-12 76.3 65 63.1
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 2.0e-12 75.9 62 64.5
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 2.0e-12 75.9 56 67.9
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 2.0e-12 75.9 114 45.6
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.6e-12 75.5 73 60.3
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 2.6e-12 75.5 94 46.8
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 2.6e-12 75.5 93 53.8
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 3.4e-12 75.1 47 70.2
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 5.7e-12 74.3 116 44.0
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 5.7e-12 74.3 115 42.6
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 5.7e-12 74.3 56 66.1
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 5.7e-12 74.3 65 61.5
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 5.7e-12 74.3 59 61.0
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 5.7e-12 74.3 97 47.4
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 7.5e-12 73.9 67 59.7
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 7.5e-12 73.9 67 59.7
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 7.5e-12 73.9 67 59.7
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 7.5e-12 73.9 114 43.9
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 7.5e-12 73.9 52 69.2
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 9.8e-12 73.6 65 60.0
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 9.8e-12 73.6 65 60.0
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 9.8e-12 73.6 54 64.8
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.3e-11 73.2 71 60.6
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.3e-11 73.2 61 59.0
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 1.3e-11 73.2 53 60.4
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 1.7e-11 72.8 94 53.2
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 2.2e-11 72.4 63 60.3
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 2.2e-11 72.4 86 52.3
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 4.8e-11 71.2 64 56.2
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 4.8e-11 71.2 93 46.2
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 6.3e-11 70.9 96 44.8
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 8.3e-11 70.5 58 60.3
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 1.1e-10 70.1 63 58.7
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 1.1e-10 70.1 54 61.1
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 1.8e-10 69.3 86 47.7
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 4.1e-10 68.2 52 69.2
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 7.0e-10 67.4 49 61.2
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 9.1e-10 67.0 63 55.6
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 1.6e-09 66.2 43 65.1
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 1.6e-09 66.2 63 54.0
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 2.7e-09 65.5 43 65.1
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 3.5e-09 65.1 63 58.7
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 4.5e-09 64.7 59 52.5
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 5.9e-09 64.3 83 42.2
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 1.0e-08 63.5 62 58.1
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 1.7e-08 62.8 54 61.1
Peaxi162Scf00025g00208 Petunia axillaris HOM05D006882 ORTHO05D008688 2.9e-08 62.0 61 59.0
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 1.1e-07 60.1 86 41.9
Lsat_1_v5_gn_4_172620 Lactuca sativa HOM05D006882 ORTHO05D048217 9.4e-07 57.0 56 55.4
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 2.1e-06 55.8 41 61.0
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 2.7e-06 55.5 58 46.6
CDE04G1794 Ceratophyllum demersum HOM05D006882 ORTHO05D008688 6.1e-06 54.3 42 61.9


User provided reference genes

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