Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 8.0e-26 119.8 66 100.0
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 4.9e-15 84.0 65 66.2
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 4.1e-14 80.9 64 64.1
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 5.4e-14 80.5 71 63.4
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 7.0e-14 80.1 60 65.0
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 1.2e-13 79.3 62 62.9
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 3.5e-13 77.8 62 62.9
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.3e-12 75.9 65 56.9
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 1.3e-12 75.9 67 61.2
Phvul.004G047300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 1.3e-12 75.9 64 59.4
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 1.3e-12 75.9 60 61.7
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.7e-12 75.5 67 61.2
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 2.3e-12 75.1 67 59.7
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 3.9e-12 74.3 59 64.4
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 3.9e-12 74.3 59 67.8
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 3.9e-12 74.3 62 59.7
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 3.9e-12 74.3 62 59.7
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 5.0e-12 73.9 62 59.7
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 6.6e-12 73.6 66 56.1
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 6.6e-12 73.6 66 56.1
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 6.6e-12 73.6 62 59.7
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 1.1e-11 72.8 60 61.7
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.5e-11 72.4 60 60.0
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 1.5e-11 72.4 60 60.0
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.5e-11 72.4 60 60.0
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.5e-11 72.4 60 60.0
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 1.5e-11 72.4 60 60.0
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-11 72.4 62 58.1
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 1.9e-11 72.0 59 62.7
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.9e-11 72.0 62 58.1
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 2.5e-11 71.6 60 63.3
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 4.3e-11 70.9 60 60.0
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 5.6e-11 70.5 64 57.8
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 5.6e-11 70.5 64 56.2
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 5.6e-11 70.5 64 56.2
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 5.6e-11 70.5 64 56.2
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 5.6e-11 70.5 64 56.2
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 7.3e-11 70.1 61 60.7
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 1.6e-10 68.9 64 54.7
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 1.6e-10 68.9 64 54.7
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 1.6e-10 68.9 64 54.7
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.6e-10 68.9 60 61.7
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 1.6e-10 68.9 60 60.0
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 1.6e-10 68.9 62 58.1
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 2.8e-10 68.2 61 59.0
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 2.8e-10 68.2 60 58.3
Eucgr.J01446 Eucalyptus grandis HOM05D002873 ORTHO05D002978 4.7e-10 67.4 120 39.2
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 6.1e-10 67.0 57 61.4
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 8.0e-10 66.6 60 58.3
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 8.0e-10 66.6 67 55.2
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 8.0e-10 66.6 67 56.7
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 8.0e-10 66.6 61 55.7
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.0e-09 66.2 62 61.3
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 1.0e-09 66.2 62 56.5
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.4e-09 65.9 62 58.1
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 4.0e-09 64.3 65 49.2
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 4.0e-09 64.3 60 60.0
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 8.9e-09 63.2 60 53.3
Aqoxy6G02621 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 8.9e-09 63.2 67 52.2
HanXRQChr14g0448071 Helianthus annuus HOM05D002873 ORTHO05D002978 8.9e-09 63.2 66 50.0
Hund13793 Selenicereus undatus HOM05D002873 ORTHO05D002978 8.9e-09 63.2 64 56.2
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.2e-08 62.8 62 53.2
GSVIVG01036482001 Vitis vinifera HOM05D002873 ORTHO05D002978 1.2e-08 62.8 66 51.5
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.5e-08 62.4 62 54.8
Aqoxy6G00630 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 2.0e-08 62.0 61 54.1
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 55.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 3.4e-08 61.2 62 53.2
Hma1.2p1_0588F.1_g184450 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 4.4e-08 60.8 60 55.0
Phvul.008G022400 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 4.4e-08 60.8 74 48.6
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 5.8e-08 60.5 59 54.2
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 5.8e-08 60.5 59 54.2
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 5.8e-08 60.5 59 54.2
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 5.8e-08 60.5 62 54.8
CARHR076460 Cardamine hirsuta HOM05D002873 ORTHO05D002978 7.5e-08 60.1 59 54.2
Sed0011149 Sechium edule HOM05D002873 ORTHO05D002978 7.5e-08 60.1 73 49.3
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 9.8e-08 59.7 62 56.5
Glyma.18G278600 Glycine max HOM05D002873 ORTHO05D002978 9.8e-08 59.7 65 49.2
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 9.8e-08 59.7 60 48.3
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.3e-07 59.3 60 53.3
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.3e-07 59.3 60 48.3
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 1.7e-07 58.9 59 52.5
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 1.7e-07 58.9 59 52.5
Aa31LG5G10000 Aethionema arabicum HOM05D002873 ORTHO05D002978 2.2e-07 58.5 66 48.5
Potri.004G106350 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 48.5
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 4.9e-07 57.4 60 48.3
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 4.9e-07 57.4 60 51.7
Cpa.g.sc188.25 Carica papaya HOM05D002873 ORTHO05D002978 6.4e-07 57.0 61 50.8
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 6.4e-07 57.0 60 50.0
Carub.0008s1411 Capsella rubella HOM05D002873 ORTHO05D002978 1.1e-06 56.2 60 50.0
Peaxi162Scf00479g00427 Petunia axillaris HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 52.2
Psat3g191840 Pisum sativum HOM05D002873 ORTHO05D002978 1.1e-06 56.2 52 55.8
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.4e-06 55.8 62 50.0
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 1.4e-06 55.8 62 50.0
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 1.4e-06 55.8 60 48.3
AUR62008938 Chenopodium quinoa HOM05D002873 ORTHO05D002978 1.9e-06 55.5 89 40.4
Ca_20748_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
Medtr7g020780 Medicago truncatula HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 49.3
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.9e-06 55.5 61 49.2
Haze_14086 Corylus avellana HOM05D002873 ORTHO05D002978 2.4e-06 55.1 84 45.2
Nitab4.5_0000612g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.4e-06 55.1 66 50.0
C09p61100 Brassica napus HOM05D010783 ORTHO05D013000 3.2e-06 54.7 66 45.5
BolC9t58953H Brassica oleracea HOM05D010783 ORTHO05D013000 3.2e-06 54.7 66 45.5
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 3.2e-06 54.7 62 51.6
Lj1g0022638 Lotus japonicus HOM05D002873 ORTHO05D002978 4.1e-06 54.3 64 46.9
THA.LOC109116986 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 4.1e-06 54.3 59 49.2
TAR374G1020 Trochodendron aralioides HOM05D061650 ORTHO05D002978 4.1e-06 54.3 41 63.4
Cfa007988 Carpinus fangiana HOM05D002873 ORTHO05D002978 5.4e-06 53.9 90 41.1
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 5.4e-06 53.9 67 49.3
Hma1.2p1_0588F.1_g184500 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 5.4e-06 53.9 66 45.5
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 7.0e-06 53.5 60 48.3
A10p23100 Brassica napus HOM05D010783 ORTHO05D013000 9.2e-06 53.1 66 43.9
Sabra04G0075800 Salix brachista HOM05D002873 ORTHO05D002978 9.2e-06 53.1 93 38.7
Sp6g28150 Schrenkiella parvula HOM05D010783 ORTHO05D013000 9.2e-06 53.1 66 43.9


User provided reference genes

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